Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 5.6e-93 344.4 185 100.0
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 5.6e-93 344.4 185 100.0
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.2e-28 129.8 113 55.8
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.6e-26 123.6 112 52.7
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.5e-26 122.5 112 51.8
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 4.5e-26 122.1 107 57.9
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 5.9e-26 121.7 107 57.0
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 2.2e-25 119.8 110 52.7
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.9e-25 119.4 118 52.5
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 3.8e-25 119.0 138 47.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.8e-25 119.0 138 47.8
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.0e-25 118.6 107 53.3
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 6.5e-25 118.2 109 52.3
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.1e-24 117.5 110 49.1
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.1e-24 117.5 113 52.2
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.5e-24 117.1 141 44.7
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.5e-24 117.1 142 45.1
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.5e-24 117.1 138 47.1
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.5e-24 117.1 113 52.2
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 3.2e-24 115.9 113 50.4
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 4.2e-24 115.5 114 49.1
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 5.5e-24 115.2 115 49.6
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 5.5e-24 115.2 109 52.3
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 7.2e-24 114.8 165 40.6
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 7.2e-24 114.8 113 49.6
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 7.2e-24 114.8 114 50.0
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 7.2e-24 114.8 115 49.6
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 7.2e-24 114.8 114 50.0
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 7.2e-24 114.8 159 41.5
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 9.4e-24 114.4 112 50.0
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.2e-23 114.0 112 50.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.2e-23 114.0 117 49.6
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.6e-23 113.6 113 50.4
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.6e-23 113.6 113 49.6
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 2.7e-23 112.8 113 49.6
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.7e-23 112.8 114 48.2
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 2.7e-23 112.8 176 40.9
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.7e-23 112.8 111 48.6
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-23 112.1 142 44.4
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-23 112.1 142 44.4
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-23 112.1 142 44.4
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-23 112.1 142 44.4
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 4.7e-23 112.1 110 50.0
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 6.1e-23 111.7 113 49.6
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 6.1e-23 111.7 112 50.0
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.0e-23 111.3 142 43.7
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 8.0e-23 111.3 144 43.8
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 8.0e-23 111.3 106 52.8
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.8e-22 110.2 142 43.7
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 4.0e-22 109.0 113 48.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 5.2e-22 108.6 116 48.3
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.8e-22 107.8 142 43.0
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 2.6e-21 106.3 174 37.4
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 5.7e-21 105.1 111 48.6
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 3.7e-20 102.4 173 38.7
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 6.3e-20 101.7 109 47.7
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.4e-19 100.5 144 42.4
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 3.1e-19 99.4 101 51.5
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 7.0e-19 98.2 110 46.4
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 4.5e-18 95.5 78 59.0
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.9e-18 95.1 90 50.0
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 5.0e-17 92.0 142 40.1
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.5e-17 91.3 127 44.1
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 9.4e-16 87.8 199 36.2
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-14 82.4 97 42.3
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.6e-13 79.7 60 60.0
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 4.4e-13 79.0 76 47.4
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 2.2e-12 76.6 218 28.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 8.3e-12 74.7 62 53.2


User provided reference genes

Program Settings