Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_28390 Physcomitrium patens HOM05D000002 ORTHO05D314023 2.8e-38 161.4 77 100.0
Pp3c8_17820 Physcomitrium patens HOM05D000002 ORTHO05D316434 3.6e-09 64.7 50 62.0
TAR535G0007 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.6e-07 58.5 76 36.8
CAN.G65.134 Capsicum annuum HOM05D000002 ORTHO05D000001 4.4e-07 57.8 73 37.0
Sopen01g023100 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen01g031800 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen05g030490 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen08g007360 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen09g011150 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen09g015540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
Sopen12g006750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 57.4 73 39.7
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 9.7e-07 56.6 75 37.3
Ca_04987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-06 56.2 77 37.7
FvH4_4g30272 Fragaria vesca HOM05D000006 ORTHO05D000001 1.3e-06 56.2 76 34.2
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 55.8 76 35.5
SHI11713 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 55.8 76 39.5
arahy.Tifrunner.gnm1.ann1.2CQC5M Arachis hypogaea HOM05D000002 ORTHO05D000001 2.2e-06 55.5 74 37.8
CSS0030214 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.5 76 34.2
CAN.G1310.2 Capsicum annuum HOM05D000253 ORTHO05D000149 2.2e-06 55.5 72 37.5
SHI16942 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 55.5 76 39.5
SHI44350 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 55.5 77 35.1
Sopen12g009920 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 55.5 73 38.4
CSS0026866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.1 75 37.3
Rhsim05G0119200 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.8e-06 55.1 75 40.0
SHI46316 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.1 69 39.1
Sopen03g020200 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-06 55.1 73 38.4
CSS0048183 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 54.7 75 36.0
SHI46776 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 54.7 77 35.1
CSS0005212 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 54.3 75 34.7
CSS0006396 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 54.3 75 36.0
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-06 54.3 74 39.2
Manes.12G102533 Manihot esculenta HOM05D000002 ORTHO05D000001 4.8e-06 54.3 73 35.6
SHI46860 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-06 54.3 77 37.7
CSS0008551 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.3e-06 53.9 75 34.7
Ca_06734_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.3e-06 53.9 79 36.7
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.3e-06 53.9 76 38.2
SHI16237 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 53.9 76 39.5
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-06 53.5 74 36.5
FvH4_2g08148 Fragaria vesca HOM05D000006 ORTHO05D000001 8.2e-06 53.5 74 36.5
RcHm_v2.0_Chr3g0470191 Rosa chinensis HOM05D000006 ORTHO05D000001 8.2e-06 53.5 74 35.1


User provided reference genes

Program Settings