Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 6.6e-93 344.0 167 100.0
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.5e-60 236.5 167 70.1
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 1.3e-40 170.2 138 60.1
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 1.3e-40 170.2 119 63.0
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 2.2e-40 169.5 93 79.6
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 3.8e-40 168.7 150 58.0
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 3.8e-40 168.7 125 64.0
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 3.8e-40 168.7 93 79.6
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.1e-39 167.2 93 78.5
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 1.1e-39 167.2 91 80.2
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.4e-39 166.8 118 66.1
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.4e-39 166.8 118 66.1
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.4e-39 166.8 91 80.2
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 1.9e-39 166.4 91 79.1
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 5.5e-39 164.9 93 76.3
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 7.2e-39 164.5 169 53.3
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 7.2e-39 164.5 91 76.9
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 7.2e-39 164.5 91 78.0
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 7.2e-39 164.5 117 64.1
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 9.3e-39 164.1 91 76.9
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 1.2e-38 163.7 107 67.3
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.6e-38 163.3 167 55.1
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.6e-38 163.3 167 55.1
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.6e-38 163.3 106 67.9
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 1.6e-38 163.3 93 76.3
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 2.1e-38 162.9 117 65.0
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.1e-38 162.9 118 66.1
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 2.1e-38 162.9 91 80.2
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 2.7e-38 162.5 128 59.4
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 3.6e-38 162.2 91 75.8
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 3.6e-38 162.2 93 77.4
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 3.6e-38 162.2 91 75.8
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 3.6e-38 162.2 92 75.0
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 3.6e-38 162.2 91 78.0
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.6e-38 162.2 167 51.5
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 3.6e-38 162.2 127 62.2
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 4.6e-38 161.8 91 78.0
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 4.6e-38 161.8 91 79.1
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 4.6e-38 161.8 91 76.9
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 4.6e-38 161.8 91 76.9
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.6e-38 161.8 91 75.8
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 4.6e-38 161.8 128 61.7
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 6.1e-38 161.4 91 79.1
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 6.1e-38 161.4 91 75.8
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 6.1e-38 161.4 91 75.8
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 6.1e-38 161.4 107 66.4
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 7.9e-38 161.0 91 78.0
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 7.9e-38 161.0 91 78.0
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 7.9e-38 161.0 91 75.8
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.0e-37 160.6 161 53.4
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 1.0e-37 160.6 166 51.2
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.0e-37 160.6 91 75.8
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.0e-37 160.6 91 75.8
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.0e-37 160.6 91 75.8
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.0e-37 160.6 91 75.8
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.0e-37 160.6 91 73.6
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 1.0e-37 160.6 118 64.4
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 1.4e-37 160.2 164 53.7
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 1.4e-37 160.2 91 76.9
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 1.4e-37 160.2 91 76.9
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 1.8e-37 159.8 91 74.7
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 1.8e-37 159.8 116 62.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 2.3e-37 159.5 101 72.3
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.3e-37 159.5 91 74.7
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 2.3e-37 159.5 91 74.7
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.3e-37 159.5 126 61.9
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 2.3e-37 159.5 169 50.9
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 2.3e-37 159.5 91 76.9
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 3.0e-37 159.1 91 74.7
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.0e-37 159.1 91 74.7
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.0e-37 159.1 91 74.7
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 3.9e-37 158.7 171 50.3
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 3.9e-37 158.7 91 71.4
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 5.1e-37 158.3 91 75.8
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 8.8e-37 157.5 91 74.7
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 1.1e-36 157.1 91 73.6
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 1.5e-36 156.8 91 74.7
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 1.5e-36 156.8 91 73.6
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.5e-36 156.8 91 73.6
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.5e-36 156.8 91 73.6
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 1.9e-36 156.4 93 74.2
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 1.9e-36 156.4 91 75.8
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 3.3e-36 155.6 129 58.1
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.3e-36 155.6 91 73.6
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 4.3e-36 155.2 92 75.0
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 5.7e-36 154.8 91 74.7
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 5.7e-36 154.8 91 72.5
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 7.4e-36 154.5 91 75.8
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 9.7e-36 154.1 146 51.4
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 1.3e-35 153.7 91 73.6
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 1.3e-35 153.7 92 73.9
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 1.3e-35 153.7 92 73.9
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 2.2e-35 152.9 91 72.5
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 4.8e-35 151.8 91 69.2
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 6.3e-35 151.4 91 71.4
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 6.3e-35 151.4 91 72.5
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 6.3e-35 151.4 115 62.6
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 8.2e-35 151.0 126 61.1
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 8.2e-35 151.0 91 71.4
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 1.1e-34 150.6 100 71.0
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 2.4e-34 149.4 91 71.4
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 4.1e-34 148.7 91 69.2
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 5.3e-34 148.3 112 60.7
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 9.1e-34 147.5 112 59.8
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 7.7e-33 144.4 92 71.7
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 5.7e-28 128.3 161 41.6
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.1e-23 114.0 91 59.3
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.1e-23 114.0 91 59.3
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.1e-23 114.0 65 73.8
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 2.1e-22 109.8 136 48.5
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 5.7e-20 101.7 90 54.4
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 8.2e-19 97.8 133 44.4
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.4e-18 97.1 56 75.0
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 2.7e-14 82.8 56 58.9
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 2.2e-11 73.2 36 86.1
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 1.8e-10 70.1 86 37.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 4.1e-10 68.9 35 82.9
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 7.0e-10 68.2 86 39.5


User provided reference genes

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