Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 8.4e-233 810.1 434 100.0
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 6.7e-129 464.9 423 63.4
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.6e-13 81.6 405 24.2
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 2.1e-13 81.3 418 25.8
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 6.0e-13 79.7 103 38.8
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 7.9e-13 79.3 405 22.5
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 3.9e-12 77.0 406 22.7
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 4.3e-11 73.6 402 24.1
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 9.6e-11 72.4 103 36.9
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.3e-10 72.0 115 38.3
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 2.1e-10 71.2 394 23.9
Cre08.g359800 Chlamydomonas reinhardtii HOM05D007071 ORTHO05D008677 4.8e-10 70.1 110 39.1
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 8.1e-10 69.3 406 22.4
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 8.1e-10 69.3 393 24.4
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 3.1e-09 67.4 114 34.2
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 5.3e-09 66.6 410 22.9
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 6.9e-09 66.2 396 23.5
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 6.9e-09 66.2 96 41.7
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 9.0e-09 65.9 105 35.2
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.2e-08 65.5 415 20.7
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.2e-08 65.5 394 21.6
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 2.0e-08 64.7 123 31.7
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 2.6e-08 64.3 398 22.9
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.6e-08 64.3 97 34.0
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 3.4e-08 63.9 116 31.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 3.4e-08 63.9 395 21.5
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 4.5e-08 63.5 97 36.1
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 4.5e-08 63.5 398 20.1
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 5.8e-08 63.2 360 23.6
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.0e-07 62.4 119 31.9
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.0e-07 62.4 401 21.4
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.0e-07 62.4 407 20.9
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.0e-07 62.4 389 22.1
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.0e-07 62.4 409 22.2
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.3e-07 62.0 119 31.9
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.7e-07 61.6 400 23.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.7e-07 61.6 400 22.5
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 1.7e-07 61.6 100 35.0
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.7e-07 61.6 429 23.5
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 2.9e-07 60.8 97 34.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.9e-07 60.8 105 30.5
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.9e-07 60.8 400 22.5
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 2.9e-07 60.8 127 29.1
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 3.8e-07 60.5 133 30.8
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.8e-07 60.5 133 30.8
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 3.8e-07 60.5 359 22.0
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 3.8e-07 60.5 104 33.7
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 4.9e-07 60.1 105 30.5
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 6.5e-07 59.7 91 39.6
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 6.5e-07 59.7 93 36.6
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 6.5e-07 59.7 97 34.0
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 8.4e-07 59.3 402 21.6
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 8.4e-07 59.3 95 35.8
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.4e-06 58.5 104 32.7
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.4e-06 58.5 104 32.7
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.4e-06 58.5 100 33.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.4e-06 58.5 100 33.0
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.4e-06 58.5 96 34.4
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.9e-06 58.2 95 31.6
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 3.2e-06 57.4 63 46.0
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 3.2e-06 57.4 96 33.3
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 4.2e-06 57.0 93 35.5
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 7.1e-06 56.2 100 31.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 9.3e-06 55.8 97 32.0


User provided reference genes

Program Settings