Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-274 948.7 478 100.0
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.7e-192 675.6 484 72.3
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-178 629.8 488 67.6
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.7e-176 621.7 464 70.3
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.2e-150 537.3 505 59.2
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 5.8e-150 535.0 467 60.6
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.6e-146 521.2 455 61.3
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.9e-134 481.1 469 54.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 5.4e-124 448.7 470 51.9
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.9e-122 442.6 358 60.6
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.4e-92 344.4 333 50.5
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.9e-92 344.0 334 50.0
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 4.6e-91 339.3 337 50.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 2.6e-89 333.6 308 51.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.3e-89 332.8 307 51.8
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 4.3e-89 332.8 308 52.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.2e-88 330.5 308 51.0
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.4e-87 327.8 356 47.5
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 2.4e-87 327.0 308 51.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 6.9e-87 325.5 309 50.5
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.2e-86 324.7 308 50.3
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.2e-86 324.7 308 50.3
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.5e-86 324.3 308 49.7
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.5e-86 324.3 308 49.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.5e-86 324.3 213 74.6
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.0e-86 323.9 308 49.7
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.0e-86 323.9 308 50.3
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 2.0e-86 323.9 307 51.1
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 2.6e-86 323.6 325 49.8
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.3e-85 321.2 310 50.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 2.9e-85 320.1 335 45.7
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 2.9e-85 320.1 314 50.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 5.0e-85 319.3 307 48.9
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 8.5e-85 318.5 307 49.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.4e-84 317.8 336 48.2
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.5e-84 317.0 314 49.4
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.2e-84 316.6 311 49.5
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.2e-84 316.2 308 50.0
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.5e-84 315.8 308 49.0
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.2e-83 314.7 336 47.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-83 314.3 314 48.7
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.6e-83 314.3 308 48.4
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.6e-83 314.3 311 49.2
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 2.1e-83 313.9 308 49.4
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.6e-83 313.2 336 47.0
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 3.6e-83 313.2 307 47.9
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 3.6e-83 313.2 340 46.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.7e-83 312.8 314 49.0
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.7e-83 312.8 311 50.5
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 6.1e-83 312.4 310 48.1
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.4e-82 311.2 350 44.9
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.8e-82 310.8 307 49.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.3e-82 310.5 309 48.5
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.3e-82 310.5 330 46.4
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.3e-82 310.5 312 49.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 6.7e-82 308.9 308 48.4
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 6.7e-82 308.9 316 48.1
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.5e-81 307.8 309 47.9
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.5e-81 307.8 340 46.2
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.5e-81 307.8 308 47.4
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 2.6e-81 307.0 309 47.9
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.3e-81 306.6 340 43.5
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 3.3e-81 306.6 316 47.8
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 5.7e-81 305.8 308 47.7
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 5.7e-81 305.8 316 47.8
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 7.4e-81 305.4 308 47.4
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 7.4e-81 305.4 316 47.2
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 9.7e-81 305.1 305 47.5
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.3e-80 304.7 308 47.4
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.3e-80 304.7 308 46.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 2.2e-80 303.9 309 47.9
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 2.2e-80 303.9 343 44.0
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.2e-80 303.9 314 47.8
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.8e-80 303.5 309 47.6
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.8e-80 303.5 309 47.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.4e-79 301.2 307 48.2
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.1e-79 300.1 309 48.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 5.3e-79 299.3 311 47.9
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 7.0e-79 298.9 308 47.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 9.1e-79 298.5 328 45.1
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.0e-78 297.4 294 47.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 4.5e-78 296.2 343 43.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 5.9e-78 295.8 309 46.9
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 7.7e-78 295.4 316 45.9
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.2e-77 293.9 288 49.3
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.2e-77 293.9 306 46.4
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 6.5e-77 292.4 286 49.7
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 4.2e-76 289.7 307 47.6
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 9.4e-76 288.5 335 44.5
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 9.4e-76 288.5 308 46.8
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 4.0e-74 283.1 317 45.7
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 9.7e-73 278.5 269 50.6
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.8e-72 276.9 310 43.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 3.7e-72 276.6 273 49.1
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 4.8e-72 276.2 277 48.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 7.7e-70 268.9 286 46.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.5e-65 254.6 263 47.5
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.3e-64 251.5 309 42.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 3.7e-64 250.0 309 42.1
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 8.3e-64 248.8 254 50.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 4.5e-62 243.0 307 42.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.0e-61 241.9 234 49.6
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 7.2e-60 235.7 240 47.9
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 4.7e-51 206.5 217 47.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 5.7e-49 199.5 307 36.8
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.2e-48 197.6 310 34.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 2.4e-39 167.5 308 32.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.6e-35 154.8 312 29.8
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.9e-23 114.8 103 49.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 3.4e-17 94.0 123 40.7
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.6e-13 79.7 113 35.4


User provided reference genes

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