Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_21380 Physcomitrium patens HOM05D002863 ORTHO05D005691 1.8e-45 185.7 98 100.0
Pp3c12_8920 Physcomitrium patens HOM05D002863 ORTHO05D005691 1.9e-15 85.9 82 58.5
SMO223G0021 Selaginella moellendorffii HOM05D002863 ORTHO05D005691 1.3e-08 63.2 63 54.0
PSO210G3945 Papaver somniferum HOM05D002863 ORTHO05D005691 1.7e-08 62.8 86 47.7
ATR0665G272 Amborella trichopoda HOM05D002863 ORTHO05D005691 2.2e-08 62.4 63 54.0
SMO223G0037 Selaginella moellendorffii HOM05D002863 ORTHO05D005691 2.2e-08 62.4 63 54.0
Ciclev10004283m.g Citrus clementina HOM05D002863 ORTHO05D005691 8.5e-08 60.5 84 46.4
PSO832G1692 Papaver somniferum HOM05D002863 ORTHO05D005691 8.5e-08 60.5 86 46.5
Haze_11201 Corylus avellana HOM05D002863 ORTHO05D005691 1.1e-07 60.1 86 44.2
FAN22G0261 Fragaria x ananassa HOM05D002863 ORTHO05D005691 2.5e-07 58.9 86 46.5
Potri.008G155400 Populus trichocarpa HOM05D002863 ORTHO05D005691 2.5e-07 58.9 86 44.2
COL.COLO4_21516 Corchorus olitorius HOM05D002863 ORTHO05D005691 3.2e-07 58.5 86 44.2
MBI05_g12094_MAGBIO Magnolia biondii HOM05D002863 ORTHO05D005691 4.2e-07 58.2 63 54.0
Prupe.1G017300 Prunus persica HOM05D002863 ORTHO05D005691 4.2e-07 58.2 86 44.2
MD13G1196500 Malus domestica HOM05D002863 ORTHO05D005691 5.5e-07 57.8 86 43.0
Atru.chr4.2430 Acer truncatum HOM05D002863 ORTHO05D005691 7.2e-07 57.4 84 42.9
Phvul.002G042600 Phaseolus vulgaris HOM05D002863 ORTHO05D005691 7.2e-07 57.4 86 40.7
Hund10646 Selenicereus undatus HOM05D002863 ORTHO05D005691 7.2e-07 57.4 94 41.5
TWI12G1273 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 7.2e-07 57.4 82 42.7
arahy.Tifrunner.gnm1.ann1.IF8NHZ Arachis hypogaea HOM05D002863 ORTHO05D005691 9.4e-07 57.0 101 38.6
arahy.Tifrunner.gnm1.ann1.SX262Z Arachis hypogaea HOM05D002863 ORTHO05D005691 9.4e-07 57.0 101 38.6
Cfa008472 Carpinus fangiana HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 41.9
Dinv14015 Davidia involucrata HOM05D002863 ORTHO05D005691 9.4e-07 57.0 78 48.7
FvH4_4g15972 Fragaria vesca HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 45.3
FAN07G0972 Fragaria x ananassa HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 45.3
FAN12G0500 Fragaria x ananassa HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 45.3
FAN17G1329 Fragaria x ananassa HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 45.3
TWI53G0907 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 9.4e-07 57.0 86 45.3
Ah.07g204230 Amaranthus hybridus HOM05D002863 ORTHO05D005691 1.2e-06 56.6 94 41.5
ClCG06G006340 Citrullus lanatus HOM05D002863 ORTHO05D005691 1.2e-06 56.6 79 46.8
CSS0031002 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 1.6e-06 56.2 63 50.8
CBR_g10879 Chara braunii HOM05D002863 ORTHO05D005691 1.6e-06 56.2 50 60.0
Glyma.01G235200 Glycine max HOM05D002863 ORTHO05D005691 1.6e-06 56.2 86 40.7
QL06p001686 Quercus lobata HOM05D002863 ORTHO05D005691 1.6e-06 56.2 86 43.0
GSVIVG01018011001 Vitis vinifera HOM05D002863 ORTHO05D005691 1.6e-06 56.2 63 52.4
CANSAT78G2191 Cannabis sativa HOM05D002863 ORTHO05D005691 2.1e-06 55.8 63 49.2
Duzib151G1175 Durio zibethinus HOM05D002863 ORTHO05D005691 2.1e-06 55.8 63 49.2
Zm00001eb004540 Zea mays HOM05D002863 ORTHO05D005691 2.1e-06 55.8 63 52.4
Aqoxy5G00438 Aquilegia oxysepala HOM05D002863 ORTHO05D005691 2.7e-06 55.5 81 48.1
CiPaw.01G198300 Carya illinoinensis HOM05D002863 ORTHO05D005691 2.7e-06 55.5 86 44.2
COL.COLO4_13640 Corchorus olitorius HOM05D002863 ORTHO05D005691 2.7e-06 55.5 63 47.6
RcHm_v2.0_Chr4g0415581 Rosa chinensis HOM05D002863 ORTHO05D005691 2.7e-06 55.5 86 44.2
Sc13g0004580 Simmondsia chinensis HOM05D002863 ORTHO05D005691 2.7e-06 55.5 63 46.0
Gohir.A09G217400 Gossypium hirsutum HOM05D002863 ORTHO05D005691 3.6e-06 55.1 63 49.2
Lj3A732T73 Lonicera japonica HOM05D002863 ORTHO05D005691 3.6e-06 55.1 63 50.8
Nn1g02374 Nelumbo nucifera HOM05D002863 ORTHO05D005691 3.6e-06 55.1 86 43.0
Sed0023639 Sechium edule HOM05D002863 ORTHO05D005691 3.6e-06 55.1 79 46.8
TAR636G1187 Trochodendron aralioides HOM05D002863 ORTHO05D005691 3.6e-06 55.1 86 44.2
CDE07G0808 Ceratophyllum demersum HOM05D002863 ORTHO05D005691 4.7e-06 54.7 81 45.7
Lsat_1_v5_gn_9_80360 Lactuca sativa HOM05D002863 ORTHO05D005691 4.7e-06 54.7 63 49.2
Os03g0160400 Oryza sativa ssp. japonica HOM05D002863 ORTHO05D005691 4.7e-06 54.7 94 37.2
Thecc.04G235200 Theobroma cacao HOM05D002863 ORTHO05D005691 4.7e-06 54.7 86 41.9
AUR62005129 Chenopodium quinoa HOM05D002863 ORTHO05D005691 6.1e-06 54.3 63 49.2
Dinv17741 Davidia involucrata HOM05D002863 ORTHO05D005691 6.1e-06 54.3 63 49.2
Potri.005G047500 Populus trichocarpa HOM05D002863 ORTHO05D005691 6.1e-06 54.3 63 47.6
THA.LOC104800956 Tarenaya hassleriana HOM05D002863 ORTHO05D005691 6.1e-06 54.3 63 47.6
Thecc.05G291200 Theobroma cacao HOM05D002863 ORTHO05D005691 6.1e-06 54.3 63 49.2
CsaV3_7G022380 Cucumis sativus L. HOM05D002863 ORTHO05D005691 8.0e-06 53.9 79 44.3
Duzib177G0218 Durio zibethinus HOM05D002863 ORTHO05D005691 8.0e-06 53.9 63 49.2
Eucgr.H03436 Eucalyptus grandis HOM05D002863 ORTHO05D005691 8.0e-06 53.9 84 40.5
Gorai.007G286400 Gossypium raimondii HOM05D002863 ORTHO05D005691 8.0e-06 53.9 80 45.0
LjContig00222g0014636 Lotus japonicus HOM05D002863 ORTHO05D005691 8.0e-06 53.9 63 47.6
VMungo1215G2311 Vigna mungo HOM05D002863 ORTHO05D005691 8.0e-06 53.9 63 49.2
Zm00001eb403310 Zea mays HOM05D002863 ORTHO05D005691 8.0e-06 53.9 63 49.2


User provided reference genes

Program Settings