Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.1e-259 899.4 454 100.0
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.5e-123 447.2 398 62.8
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 2.6e-35 154.1 323 34.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.0e-34 152.1 334 32.9
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.6e-32 143.7 332 31.9
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.0e-31 142.1 390 31.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.4e-31 141.7 334 32.0
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 2.3e-31 141.0 305 31.1
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 3.9e-31 140.2 416 29.1
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 6.7e-31 139.4 322 31.4
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 8.8e-31 139.0 334 30.5
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.1e-30 138.7 314 32.2
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 2.5e-30 137.5 319 32.0
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 2.5e-30 137.5 326 32.5
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.3e-30 137.1 316 31.6
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 5.7e-30 136.3 314 31.2
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.4e-30 136.0 310 32.6
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 9.7e-30 135.6 313 32.9
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.7e-29 134.8 327 30.6
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.2e-29 134.4 312 32.4
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.2e-29 134.4 335 31.0
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.8e-29 134.0 312 31.4
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 2.8e-29 134.0 302 33.8
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.7e-29 133.7 314 30.9
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.7e-29 133.7 314 30.6
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 3.7e-29 133.7 313 32.3
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.8e-29 133.3 337 31.8
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 6.3e-29 132.9 320 30.0
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 6.3e-29 132.9 338 30.5
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 6.3e-29 132.9 316 32.3
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.1e-28 132.1 310 31.9
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.4e-28 131.7 322 30.4
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.4e-28 131.7 322 30.4
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.4e-28 131.7 316 31.0
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.4e-28 131.7 303 31.4
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.4e-28 131.0 316 32.0
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 4.1e-28 130.2 328 29.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.1e-28 130.2 319 31.3
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 5.3e-28 129.8 311 31.2
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 6.9e-28 129.4 311 31.5
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 6.9e-28 129.4 311 31.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 6.9e-28 129.4 323 29.7
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.9e-28 129.4 318 30.2
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.1e-28 129.0 317 30.6
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.2e-27 128.6 330 30.3
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.2e-27 128.6 311 30.9
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 1.5e-27 128.3 301 28.6
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 2.0e-27 127.9 328 29.6
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.4e-27 127.1 315 31.1
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.5e-27 126.7 397 29.2
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 4.5e-27 126.7 329 32.2
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 5.9e-27 126.3 327 29.4
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 5.9e-27 126.3 308 29.2
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 7.7e-27 125.9 306 31.0
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 7.7e-27 125.9 310 31.6
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 7.7e-27 125.9 334 29.9
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.0e-26 125.6 395 27.8
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.0e-26 125.6 301 31.9
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.0e-26 125.6 308 30.2
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.3e-26 125.2 330 30.3
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-26 125.2 330 30.3
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.3e-26 125.2 330 30.3
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.3e-26 125.2 309 30.7
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-26 125.2 308 30.8
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-26 125.2 308 30.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-26 125.2 310 31.6
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.3e-26 125.2 315 29.8
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.7e-26 124.8 313 30.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 2.2e-26 124.4 309 31.4
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 2.2e-26 124.4 288 30.9
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 2.2e-26 124.4 309 31.4
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.9e-26 124.0 309 30.4
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.8e-26 123.6 305 31.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.8e-26 123.6 309 29.4
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.5e-26 122.9 308 28.6
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.1e-25 122.1 305 29.5
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.4e-25 121.7 304 29.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.9e-25 121.3 307 31.6
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 5.5e-25 119.8 326 29.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 5.5e-25 119.8 304 30.6
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.5e-25 119.8 296 30.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 5.5e-25 119.8 305 29.5
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.2e-25 119.4 363 29.8
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.2e-25 119.4 302 31.8
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 7.2e-25 119.4 311 30.5
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 9.4e-25 119.0 366 27.9
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.2e-24 118.6 316 30.7
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.6e-24 118.2 307 28.7
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.7e-24 117.5 317 30.9
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.7e-24 117.5 334 29.3
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 3.6e-24 117.1 305 31.1
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.6e-24 117.1 351 28.2
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.6e-24 117.1 307 28.7
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 3.6e-24 117.1 307 28.7
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 7.9e-24 115.9 316 28.8
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 7.9e-24 115.9 307 28.7
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.0e-23 115.5 284 31.0
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 3.9e-23 113.6 284 31.0
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-23 113.2 314 28.7
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 6.7e-23 112.8 305 30.8
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.8e-23 112.5 308 28.9
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 4.4e-22 110.2 307 28.0
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 2.8e-21 107.5 333 26.1
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 3.7e-21 107.1 331 27.5
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.7e-21 107.1 302 29.5
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.8e-20 104.8 246 30.9
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 3.1e-20 104.0 190 34.2
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.3e-18 98.6 265 30.2
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.4e-17 95.1 231 32.0
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.9e-17 94.7 265 29.8
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 6.1e-16 89.7 294 28.2
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.0e-14 84.7 233 29.2
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.6e-08 63.9 140 30.7
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 4.7e-08 63.5 140 32.1


User provided reference genes

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