Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_20150 Physcomitrium patens HOM05D014975 ORTHO05D016505 0.0e+00 3378.2 1734 100.0
Mapoly0071s0099 Marchantia polymorpha HOM05D014975 ORTHO05D016505 0.0e+00 1351.3 1706 45.4
AagrBONN_evm.TU.Sc2ySwM_362.2826 Anthoceros agrestis HOM05D014975 ORTHO05D016505 1.1e-296 1024.2 1306 45.1
CBR_g58401 Chara braunii HOM05D014975 ORTHO05D016505 4.5e-245 852.8 1948 32.0
PRCOL_00005012 Prasinoderma coloniale HOM05D014975 ORTHO05D016505 3.0e-212 743.8 1713 31.9
Cre09.g386736 Chlamydomonas reinhardtii HOM05D014975 ORTHO05D016505 2.9e-159 567.8 1752 28.9
MCO16G645 Micromonas commoda HOM05D014975 ORTHO05D016505 2.7e-136 491.5 845 35.5
AagrBONN_evm.TU.Sc2ySwM_362.2828 Anthoceros agrestis HOM05D014975 ORTHO05D016505 4.2e-41 175.3 358 34.4
MCO09G563 Micromonas commoda HOM05D009332 ORTHO05D011893 6.7e-31 141.4 512 24.2
PRCOL_00001248 Prasinoderma coloniale HOM05D009332 ORTHO05D011893 2.0e-19 103.2 496 22.2
MCO12G477 Micromonas commoda HOM05D009332 ORTHO05D011893 6.5e-18 98.2 568 21.1
CBR_g37719 Chara braunii HOM05D011955 ORTHO05D016511 2.0e-11 76.6 159 30.8
CBR_g1046 Chara braunii HOM05D018129 ORTHO05D019604 2.7e-11 76.3 494 20.9
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 1.0e-07 64.3 170 27.1
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 5.2e-07 62.0 149 28.2
ClCG11G011400 Citrullus lanatus HOM05D000002 ORTHO05D006339 1.5e-06 60.5 178 28.7
Prupe.1G063600 Prunus persica HOM05D000002 ORTHO05D006339 1.5e-06 60.5 149 31.5
MD16G1237800 Malus domestica HOM05D000002 ORTHO05D006339 3.4e-06 59.3 149 30.2
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 4.4e-06 58.9 151 25.8
Atru.chr7.1011 Acer truncatum HOM05D000002 ORTHO05D006339 5.7e-06 58.5 149 28.9
Thecc.09G200300 Theobroma cacao HOM05D000002 ORTHO05D006339 7.5e-06 58.2 149 29.5
DCAR_015254 Daucus carota HOM05D000002 ORTHO05D006339 9.8e-06 57.8 149 27.5
Lj4C850T6 Lonicera japonica HOM05D000002 ORTHO05D006339 9.8e-06 57.8 149 30.2


User provided reference genes

Program Settings