Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_19470 Physcomitrium patens HOM05D005509 ORTHO05D006411 8.8e-196 686.8 354 100.0
Pp3c13_22040 Physcomitrium patens HOM05D005509 ORTHO05D006411 3.1e-84 316.2 385 50.1
SEGI_21969 Sequoiadendron giganteum HOM05D005509 ORTHO05D006411 6.6e-10 69.3 207 32.4
Pp3c7_9280 Physcomitrium patens HOM05D017508 ORTHO05D023077 1.5e-09 68.2 181 30.4
Glyma.10G289200 Glycine max HOM05D005509 ORTHO05D006411 1.6e-08 64.7 155 30.3
AagrBONN_evm.TU.Sc2ySwM_117.824 Anthoceros agrestis HOM05D005509 ORTHO05D006411 2.8e-08 63.9 140 30.7
Nn2g10410 Nelumbo nucifera HOM05D005509 ORTHO05D006411 2.8e-08 63.9 166 31.3
Dinv25997 Davidia involucrata HOM05D005509 ORTHO05D006411 3.6e-08 63.5 166 29.5
Nn2g12800 Nelumbo nucifera HOM05D005509 ORTHO05D006411 3.6e-08 63.5 142 31.0
Prupe.2G232700 Prunus persica HOM05D005509 ORTHO05D006411 3.6e-08 63.5 166 29.5
COL.COLO4_14983 Corchorus olitorius HOM05D005509 ORTHO05D006411 8.1e-08 62.4 155 31.0
FvH4_7g22070 Fragaria vesca HOM05D005509 ORTHO05D006411 8.1e-08 62.4 166 29.5
FAN01G1468 Fragaria x ananassa HOM05D005509 ORTHO05D006411 8.1e-08 62.4 166 29.5
FAN06G1416 Fragaria x ananassa HOM05D005509 ORTHO05D006411 8.1e-08 62.4 166 29.5
Duzib106G1457 Durio zibethinus HOM05D005509 ORTHO05D006411 1.1e-07 62.0 155 31.0
CANSAT35G0030 Cannabis sativa HOM05D002464 ORTHO05D002530 1.8e-07 61.2 178 28.7
Duzib114G0718 Durio zibethinus HOM05D005509 ORTHO05D006411 1.8e-07 61.2 179 28.5
FAN06G2974 Fragaria x ananassa HOM05D005509 ORTHO05D006411 1.8e-07 61.2 166 28.9
Ciclev10032822m.g Citrus clementina HOM05D005509 ORTHO05D006411 2.4e-07 60.8 155 29.7
Glyma.20G099700 Glycine max HOM05D005509 ORTHO05D006411 2.4e-07 60.8 155 29.0
TPR.G13986 Trifolium pratense HOM05D005509 ORTHO05D006411 2.4e-07 60.8 155 29.7
unitig_746.g26691 Utricularia gibba HOM05D002464 ORTHO05D002530 2.4e-07 60.8 157 29.3
VMungo0720G2814 Vigna mungo HOM05D005509 ORTHO05D006411 3.1e-07 60.5 175 28.6
Pp3c10_18090 Physcomitrium patens HOM05D005509 ORTHO05D006411 4.0e-07 60.1 175 29.7
Psat6g235920 Pisum sativum HOM05D005509 ORTHO05D006411 4.0e-07 60.1 155 28.4
Lalb_Chr21g0307401 Lupinus albus HOM05D005509 ORTHO05D006411 5.3e-07 59.7 191 25.7
Medtr1g115285 Medicago truncatula HOM05D005509 ORTHO05D006411 5.3e-07 59.7 166 28.3
Thecc.10G045900 Theobroma cacao HOM05D005509 ORTHO05D006411 5.3e-07 59.7 155 30.3
CSS0029595 Camellia sinensis var. sinensis HOM05D005509 ORTHO05D006411 6.9e-07 59.3 157 28.7
Pp3c3_30480 Physcomitrium patens HOM05D005509 ORTHO05D006411 6.9e-07 59.3 158 29.7
Sed0018254 Sechium edule HOM05D005509 ORTHO05D006411 6.9e-07 59.3 155 32.3
VMungo1215G0222 Vigna mungo HOM05D001228 ORTHO05D002377 6.9e-07 59.3 205 27.8
arahy.Tifrunner.gnm1.ann1.LMNG4E Arachis hypogaea HOM05D005509 ORTHO05D006411 9.0e-07 58.9 178 28.1
Haze_14346 Corylus avellana HOM05D002464 ORTHO05D002530 9.0e-07 58.9 157 31.2
HanXRQChr08g0220491 Helianthus annuus HOM05D005509 ORTHO05D006411 1.2e-06 58.5 162 30.2
CSS0042515 Camellia sinensis var. sinensis HOM05D005509 ORTHO05D006411 1.5e-06 58.2 157 28.0
ClCG07G003330 Citrullus lanatus HOM05D005509 ORTHO05D006411 1.5e-06 58.2 155 31.6
CsaV3_5G008080 Cucumis sativus L. HOM05D005509 ORTHO05D006411 1.5e-06 58.2 155 31.6
Carub.0001s1695 Capsella rubella HOM05D002464 ORTHO05D002530 2.0e-06 57.8 157 28.7
Gohir.A10G216300 Gossypium hirsutum HOM05D005509 ORTHO05D006411 2.0e-06 57.8 155 30.3
Gohir.D10G225300 Gossypium hirsutum HOM05D005509 ORTHO05D006411 2.0e-06 57.8 155 30.3
Gorai.011G256300 Gossypium raimondii HOM05D005509 ORTHO05D006411 2.0e-06 57.8 155 30.3
Hma1.2p1_0533F.1_g173520 Hydrangea macrophylla HOM05D005509 ORTHO05D006411 2.0e-06 57.8 157 28.7
Manes.03G090700 Manihot esculenta HOM05D002464 ORTHO05D002530 2.0e-06 57.8 150 31.3
CiPaw.01G284800 Carya illinoinensis HOM05D005509 ORTHO05D006411 2.6e-06 57.4 155 28.4
FAN03G3362 Fragaria x ananassa HOM05D005509 ORTHO05D006411 2.6e-06 57.4 166 29.5
Cfa007735 Carpinus fangiana HOM05D002464 ORTHO05D002530 3.4e-06 57.0 157 31.2
DCAR_019647 Daucus carota HOM05D002464 ORTHO05D002530 3.4e-06 57.0 155 27.1
Pp3c11_11330 Physcomitrium patens HOM05D017508 ORTHO05D023077 3.4e-06 57.0 194 27.8
Rhsim06G0183200 Rhododendron simsii HOM05D002464 ORTHO05D002530 3.4e-06 57.0 157 29.3
TAR369G0916 Trochodendron aralioides HOM05D005509 ORTHO05D006411 3.4e-06 57.0 155 26.5
TAR369G1093 Trochodendron aralioides HOM05D005509 ORTHO05D006411 3.4e-06 57.0 155 26.5
TAR374G0262 Trochodendron aralioides HOM05D001228 ORTHO05D002377 3.4e-06 57.0 176 28.4
Ca_11287_v3 Cicer arietinum L. HOM05D005509 ORTHO05D006411 4.5e-06 56.6 155 27.7
Glyma.17G090100 Glycine max HOM05D001228 ORTHO05D002377 4.5e-06 56.6 206 27.7
Manes.10G032200 Manihot esculenta HOM05D005509 ORTHO05D006411 4.5e-06 56.6 155 28.4
Potri.008G053500 Populus trichocarpa HOM05D005509 ORTHO05D006411 4.5e-06 56.6 155 29.7
Potri.010G207000 Populus trichocarpa HOM05D005509 ORTHO05D006411 4.5e-06 56.6 155 29.7
RcHm_v2.0_Chr1g0366461 Rosa chinensis HOM05D005509 ORTHO05D006411 4.5e-06 56.6 166 28.3
Dinv21342 Davidia involucrata HOM05D002464 ORTHO05D002530 5.8e-06 56.2 157 26.8
Lj8A85G36 Lonicera japonica HOM05D005509 ORTHO05D006411 5.8e-06 56.2 157 26.1
LjContig00357g0008800 Lotus japonicus HOM05D005509 ORTHO05D006411 5.8e-06 56.2 155 30.3
Peaxi162Scf00111g00526 Petunia axillaris HOM05D002464 ORTHO05D002530 5.8e-06 56.2 178 26.4
Phvul.003G199800 Phaseolus vulgaris HOM05D001228 ORTHO05D002377 7.6e-06 55.8 206 27.2
Pp3c12_23720 Physcomitrium patens HOM05D005509 ORTHO05D006411 7.6e-06 55.8 160 28.1
Solyc10g007660.3 Solanum lycopersicum HOM05D002464 ORTHO05D002530 7.6e-06 55.8 157 26.8
TWI63G1706 Tripterygium wilfordii HOM05D005509 ORTHO05D006411 7.6e-06 55.8 166 28.3
DCAR_017558 Daucus carota HOM05D002464 ORTHO05D002530 9.9e-06 55.5 157 29.3
Dinv26634 Davidia involucrata HOM05D002464 ORTHO05D002530 9.9e-06 55.5 189 25.9
MD01G1125700 Malus domestica HOM05D005509 ORTHO05D006411 9.9e-06 55.5 166 29.5
SEGI_01953 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 9.9e-06 55.5 154 33.8
Sopen10g003570 Solanum pennellii HOM05D002464 ORTHO05D002530 9.9e-06 55.5 157 27.4
THA.LOC104808074 Tarenaya hassleriana HOM05D002464 ORTHO05D002530 9.9e-06 55.5 157 29.9
VMungo1309G1620 Vigna mungo HOM05D001228 ORTHO05D002377 9.9e-06 55.5 193 29.0


User provided reference genes

Program Settings