Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.3e-77 292.4 166 100.0
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.3e-77 292.4 166 100.0
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.7e-14 82.8 143 43.4
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 5.7e-12 75.1 144 34.7
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 6.3e-11 71.6 148 39.2
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 5.3e-10 68.6 133 39.1
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.2e-09 67.4 137 37.2
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 1.2e-09 67.4 137 37.2
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.6e-09 66.2 137 37.2
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 3.4e-09 65.9 137 35.8
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 3.4e-09 65.9 137 37.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 4.5e-09 65.5 137 36.5
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.9e-09 65.1 133 35.3
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.9e-09 65.1 133 35.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 1.0e-08 64.3 131 37.4
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.3e-08 63.9 133 36.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 1.7e-08 63.5 133 37.6
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.9e-08 62.8 137 36.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 3.8e-08 62.4 133 34.6
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 3.8e-08 62.4 159 33.3
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 5.0e-08 62.0 133 37.6
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 5.0e-08 62.0 133 38.3
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 6.5e-08 61.6 133 36.1
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 8.5e-08 61.2 131 35.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.5e-08 61.2 138 34.8
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 8.5e-08 61.2 133 36.1
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.5e-08 61.2 163 32.5
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.1e-07 60.8 137 34.3
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.1e-07 60.8 133 36.1
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.4e-07 60.5 142 37.3
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.4e-07 60.5 133 36.1
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.9e-07 60.1 133 35.3
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.9e-07 60.1 133 36.1
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.5e-07 59.7 137 34.3
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 2.5e-07 59.7 133 36.1
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 3.2e-07 59.3 137 34.3
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 3.2e-07 59.3 133 34.6
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 3.2e-07 59.3 133 33.1
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 4.2e-07 58.9 133 36.1
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 4.2e-07 58.9 137 34.3
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 4.2e-07 58.9 133 33.1
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 5.5e-07 58.5 143 35.7
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 7.2e-07 58.2 137 34.3
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 7.2e-07 58.2 133 35.3
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 7.2e-07 58.2 137 32.8
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 9.4e-07 57.8 133 33.8
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 9.4e-07 57.8 134 35.8
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 9.4e-07 57.8 133 34.6
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 9.4e-07 57.8 134 38.1
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.2e-06 57.4 136 35.3
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.2e-06 57.4 133 34.6
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.2e-06 57.4 133 34.6
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 1.6e-06 57.0 137 33.6
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.6e-06 57.0 144 34.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.6e-06 57.0 133 36.8
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.1e-06 56.6 136 35.3
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.1e-06 56.6 133 36.8
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.1e-06 56.6 133 33.8
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 2.7e-06 56.2 142 36.6
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.7e-06 56.2 133 35.3
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 2.7e-06 56.2 130 36.9
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-06 56.2 133 35.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-06 56.2 133 35.3
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.6e-06 55.8 137 32.8
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 3.6e-06 55.8 137 32.8
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 3.6e-06 55.8 137 32.8
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 3.6e-06 55.8 133 33.8
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 3.6e-06 55.8 137 32.1
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 3.6e-06 55.8 133 31.6
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 4.7e-06 55.5 137 32.8
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 4.7e-06 55.5 138 31.9
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 4.7e-06 55.5 138 31.9
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.7e-06 55.5 137 32.8
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 4.7e-06 55.5 133 34.6
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 6.1e-06 55.1 137 35.0
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 6.1e-06 55.1 137 33.6
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 6.1e-06 55.1 42 64.3
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.1e-06 55.1 137 32.8
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.1e-06 55.1 137 32.8
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 7.9e-06 54.7 137 35.0
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 7.9e-06 54.7 133 34.6
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 7.9e-06 54.7 133 32.3


User provided reference genes

Program Settings