Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.5e-214 749.2 376 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 7.7e-150 534.3 375 70.9
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 3.1e-138 495.7 366 68.0
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.2e-137 493.8 370 65.9
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.2e-137 493.8 364 66.5
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.3e-136 490.3 373 65.7
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 1.1e-135 487.3 374 65.2
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.4e-135 486.9 372 65.3
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 2.4e-135 486.1 366 65.6
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 5.4e-135 485.0 368 65.8
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 9.2e-135 484.2 367 67.3
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 1.6e-134 483.4 368 65.8
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.7e-134 482.6 367 66.2
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.7e-134 482.6 372 64.2
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 3.5e-134 482.3 371 65.0
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 4.6e-134 481.9 366 66.1
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.0e-133 480.7 367 64.9
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.3e-133 480.3 367 65.1
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.3e-133 480.3 367 65.4
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.7e-133 479.9 369 65.0
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.7e-133 479.9 369 64.0
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.9e-133 478.8 370 64.6
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 6.6e-133 478.0 370 65.7
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 8.6e-133 477.6 366 64.8
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 1.1e-132 477.2 368 64.4
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.1e-132 477.2 369 64.5
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.1e-132 477.2 367 64.0
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.1e-132 477.2 368 64.7
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.5e-132 476.9 366 64.2
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.5e-132 476.9 370 64.1
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.5e-132 476.9 367 64.6
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.5e-132 476.9 367 64.9
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.5e-132 476.9 367 64.9
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.9e-132 476.5 372 64.2
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 2.5e-132 476.1 368 64.1
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.5e-132 476.1 368 65.2
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 7.3e-132 474.6 368 64.4
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.6e-131 473.4 374 63.4
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.8e-131 472.6 368 64.1
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 3.6e-131 472.2 368 64.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 4.7e-131 471.9 369 63.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 4.7e-131 471.9 371 65.0
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 6.2e-131 471.5 367 63.8
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 6.2e-131 471.5 371 64.4
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.4e-130 470.3 367 64.0
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.4e-130 470.3 368 64.4
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 1.8e-130 469.9 371 63.9
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.3e-130 469.5 369 64.0
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.3e-130 469.5 367 64.0
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 3.1e-130 469.2 374 63.6
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.1e-130 469.2 370 63.2
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.1e-130 469.2 369 63.1
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.0e-130 468.8 390 62.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 5.2e-130 468.4 374 63.4
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 8.9e-130 467.6 370 63.0
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.2e-129 467.2 376 62.5
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.5e-129 466.8 384 61.7
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.0e-129 466.5 370 63.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.6e-129 466.1 370 63.0
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 7.5e-129 464.5 376 62.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.3e-128 463.8 370 62.4
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 1.7e-128 463.4 376 62.2
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.9e-128 461.8 367 63.5
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.4e-127 460.3 370 62.7
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.9e-127 459.9 368 62.0
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.2e-127 459.1 367 62.9
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.1e-127 458.8 357 63.0
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 5.4e-127 458.4 367 63.2
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.2e-126 457.2 367 62.9
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.7e-126 456.1 373 61.9
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 3.5e-126 455.7 400 58.8
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.0e-125 454.1 373 61.7
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 3.9e-125 452.2 372 61.6
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 6.6e-125 451.4 372 62.1
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 8.6e-125 451.1 379 60.2
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 8.6e-125 451.1 374 61.8
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 1.5e-124 450.3 371 62.0
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 2.5e-124 449.5 367 63.2
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 7.3e-124 448.0 369 62.1
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 7.3e-124 448.0 372 61.8
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 9.5e-124 447.6 367 62.1
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.1e-123 446.4 367 62.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 3.6e-123 445.7 369 62.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 6.8e-122 441.4 312 68.6
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 8.9e-122 441.0 382 60.2
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 6.4e-120 434.9 362 62.2
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.4e-120 434.9 368 60.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 6.0e-118 428.3 300 67.7
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.0e-117 426.0 366 59.3
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.7e-115 418.7 357 59.9
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 8.9e-114 414.5 284 69.0
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 1.5e-113 413.7 284 70.1
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 6.9e-106 388.3 306 63.1
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 4.0e-98 362.5 281 65.1
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 9.0e-98 361.3 273 65.6
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.5e-89 334.0 241 68.5
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 3.2e-87 326.2 227 70.0
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.4e-79 300.8 305 52.1
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 6.1e-78 295.4 228 64.9
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 9.0e-74 281.6 227 62.1
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 4.2e-55 219.5 213 56.3
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.5e-52 211.1 185 58.9
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.7e-27 127.9 115 57.4
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.4e-26 124.0 119 54.6
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 4.6e-25 119.8 129 51.9
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.5e-23 114.0 127 51.2
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.3e-23 113.2 105 55.2
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.6e-22 111.3 127 51.2
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.1e-22 110.9 116 51.7
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.1e-22 110.9 116 51.7
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.0e-22 109.0 125 50.4
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 4.7e-14 83.2 103 43.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.1e-13 80.5 66 56.1
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 4.6e-09 66.6 54 55.6
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 7.8e-09 65.9 54 55.6
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.3e-08 64.3 54 55.6
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 4.3e-07 60.1 54 51.9
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 2.8e-06 57.4 217 26.3
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 6.2e-06 56.2 42 50.0


User provided reference genes

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