Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 3.2e-107 391.7 191 100.0
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 9.2e-107 390.2 190 100.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.2e-51 205.7 148 63.5
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 4.6e-50 201.8 167 58.1
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 6.0e-50 201.4 159 58.5
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 7.9e-50 201.1 169 55.0
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 1.0e-49 200.7 150 60.0
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.3e-49 200.3 169 54.4
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.8e-49 199.9 150 60.0
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 1.8e-49 199.9 149 61.1
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 2.3e-49 199.5 148 62.2
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 3.0e-49 199.1 150 59.3
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.0e-49 199.1 148 60.8
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 3.9e-49 198.7 148 62.2
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 3.9e-49 198.7 148 61.5
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 5.1e-49 198.4 169 54.4
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 5.1e-49 198.4 150 59.3
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 5.1e-49 198.4 150 60.7
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 8.7e-49 197.6 150 60.0
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 8.7e-49 197.6 147 60.5
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 8.7e-49 197.6 147 60.5
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 8.7e-49 197.6 149 60.4
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 8.7e-49 197.6 148 58.8
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 1.1e-48 197.2 150 60.7
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 1.9e-48 196.4 159 56.6
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.5e-48 196.1 148 60.1
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 2.5e-48 196.1 150 60.7
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 2.5e-48 196.1 150 59.3
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 3.3e-48 195.7 147 59.2
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 5.7e-48 194.9 150 58.7
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 5.7e-48 194.9 169 53.3
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 5.7e-48 194.9 150 58.7
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 5.7e-48 194.9 167 55.1
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 7.4e-48 194.5 148 58.1
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 7.4e-48 194.5 150 58.7
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 9.6e-48 194.1 169 55.6
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 9.6e-48 194.1 149 57.0
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 1.3e-47 193.7 167 53.3
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.3e-47 193.7 146 63.0
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 1.3e-47 193.7 150 58.0
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.6e-47 193.4 169 50.9
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 1.6e-47 193.4 168 54.2
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 2.1e-47 193.0 150 58.0
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 2.8e-47 192.6 148 58.1
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 4.8e-47 191.8 167 53.3
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 4.8e-47 191.8 150 56.7
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 6.3e-47 191.4 148 58.8
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 8.2e-47 191.0 167 53.3
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 8.2e-47 191.0 150 56.7
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 8.2e-47 191.0 150 58.0
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.1e-46 190.7 148 59.5
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 1.1e-46 190.7 148 58.8
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.4e-46 190.3 150 58.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.4e-46 190.3 147 57.1
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 1.4e-46 190.3 169 52.1
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 1.4e-46 190.3 148 58.8
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 1.8e-46 189.9 169 53.8
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 1.8e-46 189.9 169 53.8
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 2.4e-46 189.5 150 58.0
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 2.4e-46 189.5 150 58.0
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 3.1e-46 189.1 148 58.8
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.1e-46 189.1 147 57.1
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 4.1e-46 188.7 148 56.8
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 4.1e-46 188.7 148 56.1
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 5.3e-46 188.3 173 53.2
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 5.3e-46 188.3 147 55.8
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 6.9e-46 188.0 150 58.0
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 9.0e-46 187.6 169 52.1
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.5e-45 186.8 149 56.4
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.0e-45 186.4 150 57.3
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 2.0e-45 186.4 150 57.3
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 2.0e-45 186.4 172 52.3
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.0e-45 186.4 150 58.0
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 2.6e-45 186.0 150 57.3
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 2.6e-45 186.0 150 57.3
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 2.6e-45 186.0 150 57.3
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.6e-45 186.0 148 58.8
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.6e-45 186.0 149 54.4
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 2.6e-45 186.0 169 52.7
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 3.4e-45 185.7 170 53.5
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 3.4e-45 185.7 170 53.5
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.4e-45 185.7 159 54.1
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 4.5e-45 185.3 169 53.3
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 4.5e-45 185.3 169 53.8
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 4.5e-45 185.3 150 58.7
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.0e-44 184.1 148 55.4
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.3e-44 183.7 148 57.4
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 1.7e-44 183.3 169 52.1
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 1.7e-44 183.3 148 54.7
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 2.9e-44 182.6 169 52.1
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 3.8e-44 182.2 150 56.0
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 5.0e-44 181.8 169 53.3
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 8.5e-44 181.0 150 57.3
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 1.9e-43 179.9 173 51.4
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 4.2e-43 178.7 157 53.5
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 5.5e-43 178.3 148 56.8
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.2e-42 177.2 123 62.6
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.6e-42 176.8 149 55.0
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 3.6e-42 175.6 149 55.0
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 4.6e-42 175.3 149 53.0
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 7.9e-42 174.5 147 56.5
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 7.9e-42 174.5 128 61.7
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 3.9e-41 172.2 128 59.4
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 5.1e-41 171.8 128 60.9
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.9e-40 169.9 155 52.9
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 3.3e-40 169.1 125 59.2
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.3e-39 167.2 148 53.4
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 1.8e-38 163.3 128 57.8
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 2.4e-38 162.9 186 43.5
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 6.9e-38 161.4 151 52.3
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 6.9e-38 161.4 229 38.4
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 3.8e-36 155.6 193 41.5
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 1.6e-34 150.2 105 59.0
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 2.7e-34 149.4 108 59.3
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 7.9e-34 147.9 103 59.2
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 1.4e-33 147.1 104 59.6
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 3.0e-33 146.0 102 61.8
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 8.8e-33 144.4 160 45.0
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.5e-32 143.7 102 59.8
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 3.3e-32 142.5 114 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 9.7e-32 141.0 129 49.6
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 4.8e-31 138.7 104 56.7
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 3.1e-30 136.0 151 44.4
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.1e-30 136.0 158 44.9
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 2.9e-28 129.4 104 54.8
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 1.9e-27 126.7 97 57.7
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.7e-26 122.9 90 57.8
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.4e-25 120.6 85 62.4
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.5e-16 90.5 211 29.9
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.8e-14 83.6 71 52.1
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 4.1e-14 82.4 95 44.2
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 2.0e-13 80.1 71 47.9
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 8.8e-09 64.7 43 62.8
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 1.2e-08 64.3 89 40.4


User provided reference genes

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