Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 3.3e-244 848.2 507 100.0
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.7e-139 500.4 517 59.4
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 3.0e-24 117.5 359 32.3
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 4.4e-23 113.6 353 30.9
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 4.4e-23 113.6 353 30.9
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.3e-22 112.1 205 37.1
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.2e-22 111.3 205 37.1
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 2.2e-22 111.3 201 37.8
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 4.9e-22 110.2 201 48.3
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 4.9e-22 110.2 384 31.5
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.3e-22 109.4 420 36.4
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 8.3e-22 109.4 215 34.4
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.4e-21 108.6 415 35.7
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.4e-21 108.6 356 32.0
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 2.4e-21 107.8 308 33.8
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 5.4e-21 106.7 208 36.5
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 9.2e-21 105.9 425 30.4
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 9.2e-21 105.9 207 47.3
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 1.6e-20 105.1 278 33.1
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 2.0e-20 104.8 568 30.5
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 2.7e-20 104.4 417 27.8
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.6e-20 103.6 215 36.3
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.6e-20 103.6 196 37.2
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 4.6e-20 103.6 355 31.3
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 5.9e-20 103.2 155 38.7
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 5.9e-20 103.2 248 33.1
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 7.8e-20 102.8 413 28.3
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 7.8e-20 102.8 413 27.8
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 1.0e-19 102.4 367 30.2
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.3e-19 102.1 447 36.2
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.3e-19 102.1 451 34.6
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 1.3e-19 102.1 425 36.7
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 1.7e-19 101.7 155 38.1
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.7e-19 101.7 423 34.3
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 2.3e-19 101.3 218 44.0
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.3e-19 101.3 422 27.3
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 3.0e-19 100.9 425 34.4
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 3.0e-19 100.9 421 29.5
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 3.0e-19 100.9 395 30.1
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.0e-19 100.9 395 30.1
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 3.9e-19 100.5 429 28.7
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 3.9e-19 100.5 408 30.1
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 5.0e-19 100.1 395 30.1
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 5.0e-19 100.1 229 33.6
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 8.6e-19 99.4 387 28.9
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-18 99.0 411 34.1
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 1.5e-18 98.6 165 39.4
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 1.5e-18 98.6 190 46.8
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 2.5e-18 97.8 399 29.8
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 3.3e-18 97.4 352 31.0
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 3.3e-18 97.4 344 32.3
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 3.3e-18 97.4 418 27.5
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 5.6e-18 96.7 329 30.1
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.6e-18 96.7 234 35.0
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.6e-18 96.7 413 33.7
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.6e-18 96.7 234 35.5
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 9.5e-18 95.9 381 28.6
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 9.5e-18 95.9 103 48.5
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 1.2e-17 95.5 346 31.2
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 1.2e-17 95.5 215 33.5
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 1.2e-17 95.5 434 26.5
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 1.6e-17 95.1 424 28.1
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 1.6e-17 95.1 370 29.2
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.6e-17 95.1 370 30.3
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 1.6e-17 95.1 353 31.2
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 2.1e-17 94.7 201 33.8
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 2.1e-17 94.7 383 29.0
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 2.8e-17 94.4 231 36.8
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 2.8e-17 94.4 454 33.0
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 2.8e-17 94.4 428 26.2
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 2.8e-17 94.4 409 33.3
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 2.8e-17 94.4 330 30.0
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.8e-17 94.4 442 31.0
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 3.6e-17 94.0 374 30.2
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 6.2e-17 93.2 508 33.5
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 2.3e-16 91.3 199 32.7
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 5.2e-16 90.1 223 35.0
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 5.2e-16 90.1 134 56.7
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 6.8e-16 89.7 416 27.4
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 6.8e-16 89.7 379 29.8
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 6.8e-16 89.7 416 27.6
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 8.9e-16 89.4 425 26.6
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.2e-15 89.0 394 27.2
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.2e-15 89.0 91 50.5
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 3.4e-15 87.4 454 32.6
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 4.4e-15 87.0 202 44.1
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 4.4e-15 87.0 394 28.2
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 5.8e-15 86.7 418 31.3
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 5.8e-15 86.7 263 32.7
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 7.5e-15 86.3 350 30.3
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 1.3e-14 85.5 441 27.4
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.3e-14 85.5 358 29.6
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 2.2e-14 84.7 377 27.3
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 2.2e-14 84.7 403 28.0
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 2.2e-14 84.7 385 30.1
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 2.2e-14 84.7 420 27.6
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 3.7e-14 84.0 427 26.7
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 4.9e-14 83.6 370 27.6
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 4.9e-14 83.6 394 30.2
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 6.4e-14 83.2 419 28.6
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 6.4e-14 83.2 449 30.7
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 8.3e-14 82.8 467 30.6
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.9e-13 81.6 206 32.5
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 2.4e-13 81.3 463 27.2
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 4.1e-13 80.5 485 28.2
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 4.1e-13 80.5 462 26.6
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 5.4e-13 80.1 367 31.9
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 9.2e-13 79.3 72 52.8
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 9.2e-13 79.3 442 31.9
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 9.2e-13 79.3 442 25.3
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 2.7e-12 77.8 461 31.0
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 3.5e-12 77.4 392 27.0
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 3.5e-12 77.4 394 29.4
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 7.8e-12 76.3 72 52.8
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 1.7e-11 75.1 262 33.2
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 8.6e-11 72.8 524 31.7
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 8.6e-11 72.8 149 40.3
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 5.6e-10 70.1 518 29.2
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 2.8e-09 67.8 524 30.3
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-08 63.5 88 37.5


User provided reference genes

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