Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.2e-187 658.7 305 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.4e-48 196.8 215 46.5
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 9.0e-48 194.9 215 43.7
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 7.9e-44 181.8 217 42.4
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 2.2e-30 137.1 263 33.1
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.2e-28 131.3 197 37.1
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.4e-27 127.9 198 34.3
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 3.9e-27 126.3 199 33.2
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 5.2e-27 125.9 211 34.6
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 5.2e-27 125.9 212 31.6
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 8.8e-27 125.2 225 32.0
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 2.0e-26 124.0 199 34.7
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.6e-26 123.6 197 33.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 5.7e-26 122.5 198 34.3
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.7e-26 122.5 198 34.8
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 9.7e-26 121.7 205 33.2
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.3e-25 121.3 197 34.5
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 2.2e-25 120.6 197 35.0
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.8e-25 120.2 198 33.8
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.8e-25 119.4 206 33.0
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.1e-24 118.2 198 33.3
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 2.4e-24 117.1 204 34.8
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.4e-24 117.1 198 33.3
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.1e-24 116.7 210 34.3
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.1e-24 116.3 198 32.3
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 5.3e-24 115.9 196 35.2
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 9.1e-24 115.2 197 33.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.5e-23 113.2 199 33.7
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.5e-23 112.8 197 31.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.7e-22 110.9 187 31.0
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.9e-22 110.2 214 32.7
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.8e-22 109.8 187 29.9
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 6.5e-22 109.0 208 31.2
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 6.5e-22 109.0 198 32.3
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 8.5e-22 108.6 198 33.8
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.1e-21 108.2 199 33.2
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 7.2e-21 105.5 211 32.2
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.6e-20 104.4 220 31.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 4.7e-20 102.8 198 32.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.8e-19 100.9 207 33.3
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.0e-19 100.1 228 28.5
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 6.7e-19 99.0 196 33.7
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.7e-19 99.0 132 33.3
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 6.7e-19 99.0 209 29.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 2.0e-18 97.4 242 30.2
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 2.6e-18 97.1 207 30.9
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 4.4e-18 96.3 236 29.7
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 7.5e-18 95.5 204 30.9
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.3e-17 94.7 164 32.3
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.1e-16 91.7 165 27.9
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.1e-16 91.7 169 30.8
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 7.0e-16 89.0 108 37.0
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 7.7e-15 85.5 206 30.1
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.0e-14 85.1 117 34.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 5.0e-14 82.8 112 33.9
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 5.0e-14 82.8 112 33.9
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 4.2e-13 79.7 97 37.1
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 5.5e-13 79.3 108 37.0
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.5e-13 79.3 139 33.8
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 7.2e-13 79.0 91 38.5
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.2e-12 78.2 91 40.7
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.8e-11 74.3 101 38.6
AagrBONN_evm.TU.Sc2ySwM_117.1424 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.2e-10 71.6 80 45.0
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.2e-10 71.6 99 37.4
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.2e-10 71.6 108 37.0
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 5.7e-10 69.3 76 39.5
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 2.2e-09 67.4 198 26.8
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.8e-08 64.3 80 40.0
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 2.4e-08 63.9 201 27.9
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.9e-06 57.0 116 32.8


User provided reference genes

Program Settings