Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 4.7e-188 661.0 321 100.0
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 5.9e-98 361.7 260 65.8
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 6.1e-95 351.7 229 70.7
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 7.7e-90 334.7 235 65.5
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 1.3e-81 307.4 221 62.9
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 3.0e-78 296.2 222 59.9
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 3.0e-78 296.2 221 60.6
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 4.0e-78 295.8 223 60.5
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 4.0e-78 295.8 223 61.0
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 6.8e-78 295.0 222 60.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 8.8e-78 294.7 221 60.2
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 2.6e-77 293.1 221 61.1
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 4.4e-77 292.4 221 61.1
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 5.7e-77 292.0 221 61.5
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 7.5e-77 291.6 223 59.6
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 1.7e-76 290.4 232 57.8
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 2.8e-76 289.7 222 60.8
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 1.1e-75 287.7 221 59.7
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.1e-75 287.7 221 59.7
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 1.4e-75 287.3 221 59.3
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 3.1e-75 286.2 223 58.3
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 3.1e-75 286.2 223 58.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 5.3e-75 285.4 236 56.4
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 7.0e-75 285.0 219 58.9
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 7.0e-75 285.0 250 56.0
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.1e-75 284.6 232 56.9
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 9.1e-75 284.6 222 58.1
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.2e-74 284.3 222 59.5
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-74 283.9 265 53.6
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.6e-74 283.9 221 59.3
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 4.5e-74 282.3 223 58.7
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.9e-74 282.0 265 53.6
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 1.0e-73 281.2 221 57.9
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 1.0e-73 281.2 232 55.2
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 1.3e-73 280.8 220 59.5
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 1.3e-73 280.8 220 59.5
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.7e-73 280.4 228 57.0
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 2.2e-73 280.0 221 61.1
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 2.9e-73 279.6 220 59.5
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 3.8e-73 279.3 217 58.5
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 5.0e-73 278.9 226 57.5
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 8.5e-73 278.1 223 57.4
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 8.5e-73 278.1 222 59.0
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 1.9e-72 276.9 217 58.1
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 2.5e-72 276.6 221 59.3
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.2e-72 276.2 230 56.1
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 6.1e-71 271.9 221 55.7
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.0e-70 271.2 213 59.6
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.0e-70 271.2 253 51.8
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 2.3e-70 270.0 221 56.6
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 3.0e-70 269.6 218 56.9
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 9.8e-69 264.6 225 56.0
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 1.7e-68 263.8 223 52.0
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.1e-67 261.2 240 52.9
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.4e-67 260.8 224 52.2
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 3.1e-67 259.6 221 55.2
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 7.0e-67 258.5 278 46.8
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.2e-66 257.7 222 52.3
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 5.9e-66 255.4 207 57.5
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 2.3e-65 253.4 226 52.2
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.3e-65 253.4 232 50.4
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.7e-60 237.3 220 50.0
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.4e-59 234.2 221 49.3
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 5.4e-59 232.3 221 49.3
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 9.2e-59 231.5 221 49.8
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 2.9e-57 226.5 219 48.4
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 3.3e-56 223.0 178 60.1
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 2.1e-55 220.3 221 48.9
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 8.0e-55 218.4 214 48.6
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 5.2e-54 215.7 226 47.3
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 3.4e-53 213.0 204 52.0
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 9.8e-53 211.5 181 56.4
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.3e-52 211.1 232 46.1
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 4.3e-48 196.1 221 45.2
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.1e-47 193.7 158 58.2
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 8.0e-47 191.8 241 41.1
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 4.4e-45 186.0 166 53.0
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 5.2e-38 162.5 164 47.0
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 8.3e-36 155.2 132 51.5
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 1.6e-34 151.0 111 60.4
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.0e-33 146.7 119 58.8
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 1.5e-32 144.4 119 56.3
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.5e-32 144.4 102 62.7
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 7.3e-32 142.1 120 55.0
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 6.2e-31 139.0 198 39.4
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 4.4e-21 106.3 119 46.2
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 4.9e-20 102.8 67 59.7
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 9.0e-14 82.0 80 43.8
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 7.6e-13 79.0 194 34.0
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 3.8e-12 76.6 81 46.9
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 4.9e-12 76.3 80 37.5
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 4.2e-11 73.2 87 42.5
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 4.6e-10 69.7 58 53.4


User provided reference genes

Program Settings