Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_38010 Physcomitrium patens HOM05D003588 ORTHO05D004252 0.0e+00 2144.0 1137 100.0
Pp3c18_21770 Physcomitrium patens HOM05D003588 ORTHO05D004252 0.0e+00 1162.9 1148 56.3
Pp3c18_21850 Physcomitrium patens HOM05D003588 ORTHO05D004252 7.8e-312 1074.3 1038 57.2
Mapoly0103s0005 Marchantia polymorpha HOM05D003588 ORTHO05D004252 6.2e-251 871.7 1128 45.8
Glyma.02G089000 Glycine max HOM05D003588 ORTHO05D004252 1.3e-235 820.8 1175 42.4
CsaV3_2G033840 Cucumis sativus L. HOM05D003588 ORTHO05D004252 1.4e-234 817.4 1172 41.9
Ciclev10010937m.g Citrus clementina HOM05D003588 ORTHO05D004252 2.4e-234 816.6 1169 42.2
Sed0005237 Sechium edule HOM05D003588 ORTHO05D004252 1.9e-231 807.0 1174 41.5
TAR622G0110 Trochodendron aralioides HOM05D003588 ORTHO05D004252 9.3e-231 804.7 1184 42.7
Thecc.04G128900 Theobroma cacao HOM05D003588 ORTHO05D004252 3.5e-230 802.7 1174 41.5
Gohir.A07G174400 Gossypium hirsutum HOM05D003588 ORTHO05D004252 4.6e-230 802.4 1173 42.5
Atru.chr1.1617 Acer truncatum HOM05D003588 ORTHO05D004252 7.9e-230 801.6 1181 41.7
Duzib138G1780 Durio zibethinus HOM05D003588 ORTHO05D004252 8.7e-229 798.1 1170 43.7
Gohir.D07G181700 Gossypium hirsutum HOM05D003588 ORTHO05D004252 5.6e-228 795.4 1172 42.2
Nn4g23954 Nelumbo nucifera HOM05D003588 ORTHO05D004252 9.6e-228 794.7 1177 42.3
Hund16184 Selenicereus undatus HOM05D003588 ORTHO05D004252 1.3e-227 794.3 1160 41.9
Gorai.001G202700 Gossypium raimondii HOM05D003588 ORTHO05D004252 1.1e-226 791.2 1172 42.2
Cc07_g08540 Coffea canephora HOM05D003588 ORTHO05D004252 1.4e-226 790.8 1194 42.5
TWI53G1720 Tripterygium wilfordii HOM05D003588 ORTHO05D004252 1.8e-226 790.4 1159 42.2
Potri.004G095900 Populus trichocarpa HOM05D003588 ORTHO05D004252 2.0e-225 786.9 1172 41.7
TPR.G16544 Trifolium pratense HOM05D003588 ORTHO05D004252 1.3e-224 784.3 1188 41.9
Lj1g0020363 Lotus japonicus HOM05D003588 ORTHO05D004252 3.2e-223 779.6 1201 40.3
Manes.02G071350 Manihot esculenta HOM05D003588 ORTHO05D004252 4.2e-223 779.2 1136 43.6
PGR004G1031 Punica granatum HOM05D003588 ORTHO05D004252 9.3e-223 778.1 1172 41.6
DCAR_025903 Daucus carota HOM05D003588 ORTHO05D004252 1.2e-222 777.7 1179 40.5
Eucgr.F02790 Eucalyptus grandis HOM05D003588 ORTHO05D004252 1.6e-222 777.3 1179 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2595 Anthoceros agrestis HOM05D003588 ORTHO05D004252 2.1e-222 776.9 994 45.1
PSO017G4387 Papaver somniferum HOM05D003588 ORTHO05D004252 2.7e-222 776.5 1174 41.2
Lalb_Chr10g0091441 Lupinus albus HOM05D003588 ORTHO05D004252 4.6e-222 775.8 1188 41.7
PSO478G1111 Papaver somniferum HOM05D003588 ORTHO05D004252 2.3e-221 773.5 1173 41.9
C02p08190 Brassica napus HOM05D003588 ORTHO05D004252 3.0e-221 773.1 1160 43.6
BolC2t06743H Brassica oleracea HOM05D003588 ORTHO05D004252 3.9e-221 772.7 1160 43.6
CSS0025104 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 6.7e-221 771.9 1184 40.7
Gorai.007G184400 Gossypium raimondii HOM05D003588 ORTHO05D004252 3.3e-220 769.6 1174 41.0
AUR62023267 Chenopodium quinoa HOM05D003588 ORTHO05D004252 5.6e-220 768.8 1157 42.5
Gohir.A11G165800 Gossypium hirsutum HOM05D003588 ORTHO05D004252 5.6e-220 768.8 1169 40.4
arahy.Tifrunner.gnm1.ann1.JMF5N7 Arachis hypogaea HOM05D003588 ORTHO05D004252 1.3e-219 767.7 1172 40.9
arahy.Tifrunner.gnm1.ann1.QJYU1D Arachis hypogaea HOM05D003588 ORTHO05D004252 1.3e-219 767.7 1172 40.9
BraA02t05314Z Brassica rapa HOM05D003588 ORTHO05D004252 1.6e-219 767.3 1160 43.8
Ca_08090_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.6e-219 767.3 1181 40.7
COL.COLO4_09374 Corchorus olitorius HOM05D003588 ORTHO05D004252 1.6e-219 767.3 1228 39.2
ECA232G2944 Erigeron canadensis HOM05D003588 ORTHO05D004252 3.7e-219 766.1 1165 41.0
CSS0016689 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 6.2e-219 765.4 1178 40.9
Ca_04138_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.2e-219 765.4 1182 41.8
Lj2g0002647 Lotus japonicus HOM05D003588 ORTHO05D004252 1.4e-218 764.2 1172 40.7
CANSAT78G2002 Cannabis sativa HOM05D003588 ORTHO05D004252 2.4e-218 763.5 1185 42.8
FvH4_7g07990 Fragaria vesca HOM05D003588 ORTHO05D004252 4.0e-218 762.7 1158 41.3
Prupe.3G148000 Prunus persica HOM05D003588 ORTHO05D004252 2.0e-217 760.4 1187 42.3
ClCG11G007740 Citrullus lanatus HOM05D003588 ORTHO05D004252 3.4e-217 759.6 1174 40.5
Medtr6g004240 Medicago truncatula HOM05D003588 ORTHO05D004252 7.6e-217 758.4 1170 42.2
AL6G27090 Arabidopsis lyrata HOM05D003588 ORTHO05D004252 2.2e-216 756.9 1164 43.0
Nitab4.5_0000753g0220 Nicotiana tabacum HOM05D003588 ORTHO05D004252 2.9e-216 756.5 1136 41.8
Haze_14184 Corylus avellana HOM05D003588 ORTHO05D004252 1.1e-215 754.6 1275 40.0
Medtr7g082650 Medicago truncatula HOM05D003588 ORTHO05D004252 1.1e-215 754.6 1174 40.6
BcaC03g18474 Brassica carinata HOM05D003588 ORTHO05D004252 3.2e-215 753.1 1167 42.7
AT5G16210 Arabidopsis thaliana HOM05D003588 ORTHO05D004252 2.7e-214 750.0 1162 43.0
Glyma.05G002100 Glycine max HOM05D003588 ORTHO05D004252 4.6e-214 749.2 1199 40.3
Sp6g27950 Schrenkiella parvula HOM05D003588 ORTHO05D004252 4.6e-214 749.2 1183 42.3
Oeu050384.1 Olea europaea HOM05D003588 ORTHO05D004252 1.3e-213 747.7 1199 39.8
Manes.01G112900 Manihot esculenta HOM05D003588 ORTHO05D004252 3.0e-213 746.5 1176 42.3
Sabra04G0065000 Salix brachista HOM05D003588 ORTHO05D004252 6.7e-213 745.3 1186 39.8
Carub.0006s1440 Capsella rubella HOM05D003588 ORTHO05D004252 1.1e-212 744.6 1158 41.3
VMungo1383G2782 Vigna mungo HOM05D003588 ORTHO05D004252 3.3e-212 743.0 1182 40.3
Aa31LG11G13400 Aethionema arabicum HOM05D003588 ORTHO05D004252 1.6e-211 740.7 1170 42.0
CARHR197100 Cardamine hirsuta HOM05D003588 ORTHO05D004252 3.7e-211 739.6 1161 43.0
Os01g0514300 Oryza sativa ssp. japonica HOM05D003588 ORTHO05D004252 2.4e-210 736.9 1127 42.0
THA.LOC104820941 Tarenaya hassleriana HOM05D003588 ORTHO05D004252 3.4e-209 733.0 1166 40.3
EL10Ac2g04530 Beta vulgaris HOM05D003588 ORTHO05D004252 1.3e-208 731.1 1215 41.3
Actinidia15898 Actinidia chinensis HOM05D003588 ORTHO05D004252 5.0e-208 729.2 1130 40.5
MD09G1255900 Malus domestica HOM05D003588 ORTHO05D004252 5.5e-207 725.7 1174 40.5
MD17G1249900 Malus domestica HOM05D003588 ORTHO05D004252 9.4e-207 724.9 1171 41.2
FAN10G2177 Fragaria x ananassa HOM05D003588 ORTHO05D004252 6.1e-206 722.2 1233 38.6
Lj4C184G4 Lonicera japonica HOM05D003588 ORTHO05D004252 7.9e-206 721.8 1161 41.4
Sopen02g031000 Solanum pennellii HOM05D003588 ORTHO05D004252 1.0e-205 721.5 1203 38.4
FAN06G2375 Fragaria x ananassa HOM05D003588 ORTHO05D004252 5.1e-205 719.2 1230 38.9
AUR62009039 Chenopodium quinoa HOM05D003588 ORTHO05D004252 8.8e-205 718.4 1003 44.1
Ah.10g037630 Amaranthus hybridus HOM05D003588 ORTHO05D004252 2.2e-203 713.8 1149 41.6
Rhsim10G0072600 Rhododendron simsii HOM05D003588 ORTHO05D004252 2.2e-203 713.8 1245 36.8
Migut.H00238 Erythranthe guttata HOM05D003588 ORTHO05D004252 8.2e-203 711.8 1084 41.0
Lalb_Chr06g0176731 Lupinus albus HOM05D003588 ORTHO05D004252 1.1e-202 711.4 1179 39.1
CSS0045616 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 6.9e-202 708.8 1185 39.7
MBI16_g38076_MAGBIO Magnolia biondii HOM05D003588 ORTHO05D004252 1.2e-201 708.0 1072 42.4
SMO356G0339 Selaginella moellendorffii HOM05D003588 ORTHO05D004252 1.5e-201 707.6 1130 40.2
Psat3g097680 Pisum sativum HOM05D003588 ORTHO05D004252 2.9e-200 703.4 1180 39.2
GSVIVG01030979001 Vitis vinifera HOM05D003588 ORTHO05D004252 2.9e-200 703.4 1026 42.2
MELO3C008156.2 Cucumis melo HOM05D003588 ORTHO05D004252 8.5e-200 701.8 1025 41.0
Dinv34794 Davidia involucrata HOM05D003588 ORTHO05D004252 2.5e-199 700.3 1006 42.3
BcaNung02226 Brassica carinata HOM05D003588 ORTHO05D004252 9.4e-199 698.4 1158 40.0
ATR0681G033 Amborella trichopoda HOM05D003588 ORTHO05D004252 1.6e-198 697.6 1044 43.4
FAN03G2066 Fragaria x ananassa HOM05D003588 ORTHO05D004252 1.4e-197 694.5 1192 40.4
Psat1g052560 Pisum sativum HOM05D003588 ORTHO05D004252 6.7e-197 692.2 1034 40.8
QL02p050339 Quercus lobata HOM05D003588 ORTHO05D004252 6.7e-197 692.2 1073 42.3
VMungo0464G0444 Vigna mungo HOM05D003588 ORTHO05D004252 6.7e-197 692.2 1168 38.7
SGA_v2.0_scaffold49G18119 Striga asiatica HOM05D003588 ORTHO05D004252 8.8e-197 691.8 1173 38.4
arahy.Tifrunner.gnm1.ann1.K3Z2GB Arachis hypogaea HOM05D003588 ORTHO05D004252 7.4e-196 688.7 1175 39.6
Thhalv10012470m.g Eutrema salsugineum HOM05D003588 ORTHO05D004252 2.2e-195 687.2 1169 39.6
CAN.G625.55 Capsicum annuum HOM05D003588 ORTHO05D000105 4.2e-191 672.9 1016 41.1
MSTRG.2779 Avicennia marina HOM05D003588 ORTHO05D004252 1.4e-189 667.9 1031 41.7
Gohir.D11G172000 Gossypium hirsutum HOM05D003588 ORTHO05D004252 3.0e-189 666.8 1002 40.9
Lsat_1_v5_gn_4_155600 Lactuca sativa HOM05D003588 ORTHO05D004252 5.2e-189 666.0 1010 40.8
HanXRQChr09g0262691 Helianthus annuus HOM05D003588 ORTHO05D004252 5.7e-188 662.5 1022 42.1
A02p03430 Brassica napus HOM05D003588 ORTHO05D004252 3.7e-187 659.8 886 45.3
TPR.G25236 Trifolium pratense HOM05D003588 ORTHO05D004252 1.1e-186 658.3 1048 41.2
Solyc02g086330.4 Solanum lycopersicum HOM05D003588 ORTHO05D004252 4.1e-186 656.4 1048 40.0
QL04p012047 Quercus lobata HOM05D003588 ORTHO05D004252 1.0e-184 651.7 716 50.4
vmacro22953 Vaccinium macrocarpon HOM05D003588 ORTHO05D004252 1.1e-183 648.3 1035 40.5
Phvul.008G008300 Phaseolus vulgaris HOM05D003588 ORTHO05D004252 1.5e-183 647.9 875 44.2
BcaC03g18481 Brassica carinata HOM05D003588 ORTHO05D004252 7.2e-183 645.6 1153 39.5
CiPaw.04G044200 Carya illinoinensis HOM05D003588 ORTHO05D004252 7.2e-183 645.6 713 49.2
Phvul.004G002300 Phaseolus vulgaris HOM05D003588 ORTHO05D004252 3.6e-182 643.3 912 42.2
Sc10g0001060 Simmondsia chinensis HOM05D003588 ORTHO05D004252 8.8e-181 638.6 988 42.2
arahy.Tifrunner.gnm1.ann1.CE0ZIG Arachis hypogaea HOM05D003588 ORTHO05D004252 2.4e-178 630.6 995 40.9
Nitab4.5_0008521g0020 Nicotiana tabacum HOM05D003588 ORTHO05D004252 9.1e-178 628.6 1143 38.5
Peaxi162Scf00877g00020 Petunia axillaris HOM05D003588 ORTHO05D004252 1.0e-173 615.1 1027 39.7
HPP92_020150 Vanilla planifolia HOM05D003588 ORTHO05D004252 8.8e-173 612.1 905 43.2
Cpa.g.sc170.32 Carica papaya HOM05D003588 ORTHO05D004252 4.5e-169 599.7 1177 36.2
unitig_899.g14514 Utricularia gibba HOM05D003588 ORTHO05D004252 7.5e-164 582.4 1180 36.3
CBR_g34722 Chara braunii HOM05D003588 ORTHO05D004252 1.5e-159 568.2 1341 32.7
MD17G1249700 Malus domestica HOM05D003588 ORTHO05D004252 7.8e-153 545.8 699 45.9
Dinv33964 Davidia involucrata HOM05D003588 ORTHO05D004252 3.7e-147 526.9 646 46.3
MBI16_g39817_MAGBIO Magnolia biondii HOM05D003588 ORTHO05D004252 2.4e-146 524.2 841 41.7
vmacro05528 Vaccinium macrocarpon HOM05D003588 ORTHO05D004252 1.2e-137 495.4 694 42.8
CDE09G1345 Ceratophyllum demersum HOM05D003588 ORTHO05D004252 7.1e-114 416.4 746 36.9
Aqoxy3G00198 Aquilegia oxysepala HOM05D003588 ORTHO05D004252 7.4e-111 406.4 610 44.9
Duzib133G0570 Durio zibethinus HOM05D003588 ORTHO05D004252 7.6e-108 396.4 550 40.4
RcHm_v2.0_Chr3g0494111 Rosa chinensis HOM05D003588 ORTHO05D004252 7.1e-98 363.2 616 40.9
Aqoxy3G00199 Aquilegia oxysepala HOM05D003588 ORTHO05D004252 4.5e-92 344.0 408 46.1
RcHm_v2.0_Chr3g0494121 Rosa chinensis HOM05D003588 ORTHO05D004252 6.5e-83 313.5 406 42.1
TPR.G25232 Trifolium pratense HOM05D003588 ORTHO05D004252 4.4e-79 300.8 412 42.5
MD17G1249200 Malus domestica HOM05D003588 ORTHO05D004252 5.0e-75 287.3 417 42.0
arahy.Tifrunner.gnm1.ann1.SZ4JBM Arachis hypogaea HOM05D003588 ORTHO05D009236 1.2e-63 249.6 582 31.8
Dinv33965 Davidia involucrata HOM05D003588 ORTHO05D004252 1.7e-59 235.7 507 34.3
Zm00001eb341830 Zea mays HOM05D003588 ORTHO05D004252 9.4e-58 229.9 205 56.6
Zm00001eb341840 Zea mays HOM05D003588 ORTHO05D004252 1.2e-55 223.0 290 42.4
FAN01G1119 Fragaria x ananassa HOM05D003588 ORTHO05D004252 2.8e-49 201.8 324 40.4
BcaC04g18898 Brassica carinata HOM05D003588 ORTHO05D004252 1.2e-47 196.4 360 38.6
A10p22850 Brassica napus HOM05D003588 ORTHO05D004252 1.3e-35 156.4 363 30.6
BraA10t44352Z Brassica rapa HOM05D003588 ORTHO05D004252 2.3e-35 155.6 357 31.1
Psat1g004680 Pisum sativum HOM05D003588 ORTHO05D004252 9.8e-31 140.2 186 40.3
Cre03.g205137 Chlamydomonas reinhardtii HOM05D003588 ORTHO05D004252 1.1e-26 126.7 193 36.8
CDE09G0638 Ceratophyllum demersum HOM05D003588 ORTHO05D004252 2.8e-25 122.1 183 38.3
C09p60810 Brassica napus HOM05D003588 ORTHO05D004252 8.1e-25 120.6 274 33.2
BolC9t58921H Brassica oleracea HOM05D003588 ORTHO05D004252 8.1e-25 120.6 274 33.2
FAN01G1795 Fragaria x ananassa HOM05D003588 ORTHO05D004252 2.1e-20 105.9 176 42.0
CAN.G1113.1 Capsicum annuum HOM05D003588 ORTHO05D004252 1.9e-18 99.4 383 23.8
BcaB05g22772 Brassica carinata HOM05D003588 ORTHO05D004252 5.6e-18 97.8 200 36.0
Thhalv10014979m.g Eutrema salsugineum HOM05D003588 ORTHO05D004252 6.8e-16 90.9 107 44.9
Gohir.A08G093462 Gossypium hirsutum HOM05D003588 ORTHO05D004252 8.9e-16 90.5 160 39.4
Lalb_Chr00c03g0404241 Lupinus albus HOM05D003588 ORTHO05D004252 1.2e-15 90.1 114 46.5
Aqoxy3G00200 Aquilegia oxysepala HOM05D003588 ORTHO05D004252 2.9e-14 85.5 130 40.0
MBI16_g38075_MAGBIO Magnolia biondii HOM05D003588 ORTHO05D004252 3.8e-14 85.1 148 36.5
Hma1.2p1_0391F.1_g142780 Hydrangea macrophylla HOM05D003588 ORTHO05D004252 1.1e-13 83.6 104 41.3
Lsat_1_v5_gn_9_96101 Lactuca sativa HOM05D003588 ORTHO05D004252 7.1e-13 80.9 70 62.9
GSVIVG01030980001 Vitis vinifera HOM05D003588 ORTHO05D004252 1.2e-12 80.1 124 40.3
Cfa007893 Carpinus fangiana HOM05D003588 ORTHO05D004252 3.5e-12 78.6 124 37.9
RcHm_v2.0_Chr3g0494131 Rosa chinensis HOM05D003588 ORTHO05D004252 3.5e-12 78.6 122 39.3
Lsat_1_v5_gn_4_155620 Lactuca sativa HOM05D003588 ORTHO05D004252 4.6e-12 78.2 126 39.7
arahy.Tifrunner.gnm1.ann1.3AG3I6 Arachis hypogaea HOM05D003588 ORTHO05D004252 1.0e-11 77.0 79 43.0
MSTRG.2778 Avicennia marina HOM05D003588 ORTHO05D004252 1.3e-11 76.6 149 34.9
HanXRQChr09g0262701 Helianthus annuus HOM05D003588 ORTHO05D004252 8.7e-11 73.9 132 38.6
arahy.Tifrunner.gnm1.ann1.LXU3L0 Arachis hypogaea HOM05D003588 ORTHO05D004252 1.9e-10 72.8 146 36.3
QL02p050347 Quercus lobata HOM05D003588 ORTHO05D004252 1.9e-10 72.8 125 37.6
MCO16G648 Micromonas commoda HOM05D003588 ORTHO05D004252 7.3e-10 70.9 597 22.1
Lsat_1_v5_gn_5_147680 Lactuca sativa HOM05D003588 ORTHO05D004252 5.3e-08 64.7 111 35.1
AUR62009038 Chenopodium quinoa HOM05D003588 ORTHO05D004252 6.9e-08 64.3 109 40.4
Dinv34795 Davidia involucrata HOM05D003588 ORTHO05D004252 6.9e-08 64.3 75 44.0
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.6e-07 62.4 164 32.9
Lsat_1_v5_gn_1_73461 Lactuca sativa HOM05D003588 ORTHO05D004252 7.6e-07 60.8 81 44.4
Lalb_Chr00c03g0404231 Lupinus albus HOM05D003588 ORTHO05D004252 1.7e-06 59.7 103 30.1
Aqoxy1G03195 Aquilegia oxysepala HOM05D003588 ORTHO05D004252 3.8e-06 58.5 72 37.5
QL04p012055 Quercus lobata HOM05D003588 ORTHO05D004252 4.9e-06 58.2 60 46.7
Dinv12730 Davidia involucrata HOM05D003588 ORTHO05D004252 6.4e-06 57.8 82 40.2


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