Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 0.0e+00 1099.7 530 100.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.4e-181 640.2 524 59.2
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 5.4e-181 638.3 485 61.6
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 9.2e-181 637.5 524 59.2
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 4.3e-178 628.6 481 60.1
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.6e-178 628.2 515 57.9
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 6.1e-177 624.8 505 58.4
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.4e-176 623.6 501 57.9
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.4e-176 623.6 481 59.7
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 6.8e-176 621.3 510 57.6
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 6.8e-176 621.3 477 60.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 6.8e-176 621.3 500 58.8
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.5e-175 620.2 507 58.6
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.6e-175 619.4 482 58.5
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 4.4e-175 618.6 502 57.8
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.7e-175 618.2 500 57.4
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.7e-175 618.2 500 57.6
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 7.5e-175 617.8 483 60.7
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.3e-174 617.1 500 58.8
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.3e-174 617.1 510 57.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.2e-174 616.3 476 59.5
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 3.7e-174 615.5 503 57.9
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 4.9e-174 615.1 498 58.2
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 4.9e-174 615.1 501 57.3
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 6.4e-174 614.8 478 59.2
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 8.3e-174 614.4 497 57.9
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 1.8e-173 613.2 506 57.7
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 3.2e-173 612.5 477 59.3
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 4.1e-173 612.1 477 59.3
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 9.2e-173 610.9 483 59.2
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.6e-172 610.1 499 56.7
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 2.7e-172 609.4 509 56.8
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.5e-172 609.0 482 58.9
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 3.5e-172 609.0 510 56.7
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.5e-172 609.0 477 59.3
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 7.8e-172 607.8 483 58.8
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.0e-171 607.4 512 56.6
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.0e-171 607.4 500 56.6
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.3e-171 606.3 506 56.7
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 2.3e-171 606.3 477 59.5
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 3.9e-171 605.5 480 59.6
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 5.0e-171 605.1 505 56.2
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.5e-170 602.8 519 55.1
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 5.6e-170 601.7 509 55.0
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 5.6e-170 601.7 518 56.2
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 5.6e-170 601.7 506 56.7
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.6e-169 599.0 477 57.7
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 4.7e-169 598.6 481 57.2
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 8.0e-169 597.8 479 56.8
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 8.0e-169 597.8 518 56.0
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 3.1e-168 595.9 500 56.2
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 4.0e-168 595.5 485 56.1
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.5e-167 593.6 500 56.2
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.5e-167 593.6 496 56.0
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.6e-167 592.8 512 56.4
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 7.5e-167 591.3 523 53.7
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 7.5e-167 591.3 523 53.7
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 7.5e-167 591.3 481 55.9
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 9.8e-167 590.9 465 58.9
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.3e-166 590.5 507 56.0
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.3e-166 590.5 498 55.4
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.3e-166 590.5 543 53.2
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.2e-166 589.7 498 55.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 3.7e-166 589.0 480 57.5
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 4.9e-166 588.6 514 54.5
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 8.3e-166 587.8 477 56.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 3.2e-165 585.9 497 55.9
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 4.1e-165 585.5 477 56.6
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 7.0e-165 584.7 507 56.2
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 9.2e-165 584.3 507 56.2
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.6e-164 583.6 516 55.4
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 3.5e-164 582.4 453 60.9
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.0e-163 578.6 512 54.5
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.6e-163 578.2 491 55.2
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.9e-162 576.6 469 57.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.6e-162 575.1 528 54.0
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 4.7e-161 572.0 513 54.4
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 4.7e-161 572.0 479 56.2
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.4e-160 570.5 517 52.8
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 3.1e-160 569.3 511 53.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 3.1e-160 569.3 511 53.6
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 4.0e-160 568.9 511 53.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 3.4e-159 565.8 501 54.5
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 7.5e-159 564.7 484 55.0
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.1e-157 560.8 517 53.6
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 9.2e-157 557.8 512 53.7
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.0e-155 554.3 475 55.2
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.7e-155 553.5 444 57.2
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.3e-155 553.1 484 54.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.1e-154 550.8 451 56.3
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.5e-154 549.7 490 53.5
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.1e-153 546.6 526 51.5
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.8e-152 541.6 505 52.9
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.7e-150 537.0 511 50.5
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.5e-146 523.9 479 53.4
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 4.6e-140 502.3 479 52.8
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 5.1e-123 445.7 380 55.0
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.4e-117 427.6 371 55.0
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 2.2e-113 413.7 339 54.9
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.2e-111 407.9 338 55.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.6e-111 406.8 369 52.3
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-91 341.7 488 40.4
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.1e-88 330.1 316 50.9
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.3e-86 324.7 229 60.3
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.8e-83 312.0 326 46.9
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 3.8e-78 296.6 215 58.6
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.0e-55 221.1 173 62.4
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 2.3e-54 217.6 183 49.2
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.4e-51 208.4 149 61.7
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.6e-44 184.9 137 65.0
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 8.7e-14 82.8 102 40.2
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.7e-09 68.6 79 48.1
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 4.2e-08 63.9 52 50.0


User provided reference genes

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