Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_35110 Physcomitrium patens HOM05D009897 ORTHO05D316546 3.5e-64 248.1 120 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3027 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.5e-17 91.3 125 43.2
AagrBONN_evm.TU.Sc2ySwM_117.3209 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.2e-13 79.3 59 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3422 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.2e-13 79.3 59 57.6
AagrBONN_evm.TU.Sc2ySwM_228.4917 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.2e-13 79.3 59 57.6
AagrBONN_evm.TU.Sc2ySwM_362.922 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.2e-13 79.3 59 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3046 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.8e-13 78.2 59 55.9
AagrBONN_evm.TU.Sc2ySwM_368.2998 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.8e-13 78.2 56 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4487 Anthoceros agrestis HOM05D000004 ORTHO05D000301 8.3e-13 77.4 59 61.0
AagrBONN_evm.TU.Sc2ySwM_344.5008 Anthoceros agrestis HOM05D000004 ORTHO05D000301 8.3e-13 77.4 59 57.6
AagrBONN_evm.TU.Sc2ySwM_228.3394 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.1e-12 77.0 59 59.3
Pp3c17_14290 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.1e-12 77.0 53 64.2
Pp3c4_26010 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.1e-12 77.0 52 67.3
Pp3c19_18530 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.4e-12 76.6 52 63.5
Mapoly0091s0058 Marchantia polymorpha HOM05D007711 ORTHO05D009680 1.8e-12 76.3 59 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2692 Anthoceros agrestis HOM05D000004 ORTHO05D000301 2.4e-12 75.9 56 58.9
AagrBONN_evm.TU.Sc2ySwM_117.124 Anthoceros agrestis HOM05D000465 ORTHO05D001982 3.1e-12 75.5 113 41.6
AagrBONN_evm.TU.Sc2ySwM_362.773__774 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.1e-12 75.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_228.4480 Anthoceros agrestis HOM05D000004 ORTHO05D000301 4.1e-12 75.1 59 55.9
Pp3c4_210 Physcomitrium patens HOM05D009897 ORTHO05D319321 4.1e-12 75.1 55 65.5
Mapoly0067s0014 Marchantia polymorpha HOM05D000465 ORTHO05D009680 9.1e-12 73.9 69 52.2
AagrBONN_evm.TU.Sc2ySwM_340.1549 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.6e-11 73.2 59 55.9
AagrBONN_evm.TU.Sc2ySwM_340.717 Anthoceros agrestis HOM05D000505 ORTHO05D000301 1.6e-11 73.2 59 54.2
AagrBONN_evm.TU.Sc2ySwM_368.957 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.6e-11 73.2 58 53.4
Pp3c18_7920 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.6e-11 73.2 50 64.0
AagrBONN_evm.TU.Sc2ySwM_117.2231 Anthoceros agrestis HOM05D000004 ORTHO05D000002 2.0e-11 72.8 56 57.1
AagrBONN_evm.TU.Sc2ySwM_117.3213 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.5e-11 72.0 56 57.1
AagrBONN_evm.TU.Sc2ySwM_368.2924 Anthoceros agrestis HOM05D000465 ORTHO05D000002 3.5e-11 72.0 56 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3067 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.5e-11 71.6 59 54.2
AagrBONN_evm.TU.Sc2ySwM_328.3 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.5e-11 71.6 56 57.1
AagrBONN_evm.TU.Sc2ySwM_340.155 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.5e-11 71.6 59 57.6
AagrBONN_evm.TU.Sc2ySwM_340.551 Anthoceros agrestis HOM05D002796 ORTHO05D000301 4.5e-11 71.6 59 52.5
AagrBONN_evm.TU.Sc2ySwM_344.1730 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.9e-11 71.2 55 58.2
AagrBONN_evm.TU.Sc2ySwM_368.125 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.9e-11 71.2 56 57.1
AagrBONN_evm.TU.Sc2ySwM_228.5941 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.7e-11 70.9 56 57.1
Pp3c11_10880 Physcomitrium patens HOM05D009897 ORTHO05D311620 7.7e-11 70.9 54 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3438 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_228.4310 Anthoceros agrestis HOM05D000004 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_344.1261 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_344.3165 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_344.5526 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_362.1159 Anthoceros agrestis HOM05D000465 ORTHO05D001982 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_362.1857 Anthoceros agrestis HOM05D000465 ORTHO05D001982 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_368.3080 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 56 57.1
AagrBONN_evm.TU.Sc2ySwM_368.3081 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 56 57.1
AagrBONN_evm.TU.Sc2ySwM_369.414 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-10 70.5 59 55.9
AagrBONN_evm.TU.Sc2ySwM_228.5901 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.7e-10 69.7 59 55.9
AagrBONN_evm.TU.Sc2ySwM_362.2862 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.3e-10 69.3 59 54.2
AagrBONN_evm.TU.Sc2ySwM_368.3024 Anthoceros agrestis HOM05D000465 ORTHO05D001982 2.3e-10 69.3 59 54.2
AagrBONN_evm.TU.Sc2ySwM_344.3182 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.8e-10 68.6 59 54.2
Pp3c20_4690 Physcomitrium patens HOM05D009897 ORTHO05D015179 3.8e-10 68.6 41 78.0
AagrBONN_evm.TU.Sc2ySwM_117.1763 Anthoceros agrestis HOM05D000004 ORTHO05D000301 5.0e-10 68.2 56 55.4
AagrBONN_evm.TU.Sc2ySwM_368.2026 Anthoceros agrestis HOM05D000004 ORTHO05D000301 6.6e-10 67.8 59 49.2
AagrBONN_evm.TU.Sc2ySwM_340.1551 Anthoceros agrestis HOM05D000465 ORTHO05D001982 8.6e-10 67.4 58 55.2
AagrBONN_evm.TU.Sc2ySwM_340.1103 Anthoceros agrestis HOM05D000505 ORTHO05D000301 1.9e-09 66.2 58 53.4
AagrBONN_evm.TU.Sc2ySwM_117.2722 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.5e-09 65.9 59 54.2
Pp3c22_10600 Physcomitrium patens HOM05D009897 ORTHO05D015179 2.5e-09 65.9 51 56.9
AagrBONN_evm.TU.Sc2ySwM_117.1312 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.3e-09 65.5 58 53.4
AagrBONN_evm.TU.Sc2ySwM_344.3151 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.3e-09 65.5 59 52.5
AagrBONN_evm.TU.Sc2ySwM_368.491 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.5e-09 64.7 59 52.5
Mapoly0025s0070 Marchantia polymorpha HOM05D007711 ORTHO05D009680 5.5e-09 64.7 59 49.2
Pp3c6_230 Physcomitrium patens HOM05D009897 ORTHO05D310631 5.5e-09 64.7 40 67.5
AagrBONN_evm.TU.Sc2ySwM_228.1536 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.2e-09 64.3 58 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1696 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.2e-09 64.3 55 54.5
AagrBONN_evm.TU.Sc2ySwM_340.142 Anthoceros agrestis HOM05D000004 ORTHO05D000301 7.2e-09 64.3 58 51.7
AagrBONN_evm.TU.Sc2ySwM_368.2992 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.2e-09 64.3 55 54.5
AagrBONN_evm.TU.Sc2ySwM_368.3005 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.2e-09 64.3 55 54.5
Pp3c13_12120 Physcomitrium patens HOM05D009897 ORTHO05D015179 7.2e-09 64.3 55 58.2
AagrBONN_evm.TU.Sc2ySwM_344.2423 Anthoceros agrestis HOM05D000004 ORTHO05D000301 9.5e-09 63.9 59 49.2
AagrBONN_evm.TU.Sc2ySwM_340.916 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.6e-08 63.2 124 35.5
Pp3c15_16660 Physcomitrium patens HOM05D027435 ORTHO05D000301 1.6e-08 63.2 58 56.9
AagrBONN_evm.TU.Sc2ySwM_340.2096 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.1e-08 62.8 49 59.2
Pp3c20_9160 Physcomitrium patens HOM05D009897 ORTHO05D015179 2.1e-08 62.8 52 55.8
Pp3c3_23380 Physcomitrium patens HOM05D009897 ORTHO05D309734 2.1e-08 62.8 49 71.4
Pp3c5_22009 Physcomitrium patens HOM05D009897 ORTHO05D314109 2.1e-08 62.8 39 74.4
Pp3c18_10470 Physcomitrium patens HOM05D000465 ORTHO05D000301 4.7e-08 61.6 41 61.0
Pp3c1_31420 Physcomitrium patens HOM05D009897 ORTHO05D311968 6.1e-08 61.2 47 68.1
AagrBONN_evm.TU.Sc2ySwM_340.658 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-07 60.5 43 62.8
Pp3c21_3199 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.0e-07 60.5 49 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2636 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.4e-07 60.1 56 50.0
Mapoly0006s0107 Marchantia polymorpha HOM05D007711 ORTHO05D009680 1.4e-07 60.1 93 40.9
Pp3c21_15910 Physcomitrium patens HOM05D009897 ORTHO05D015179 1.8e-07 59.7 50 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2870 Anthoceros agrestis HOM05D000004 ORTHO05D000301 3.0e-07 58.9 55 49.1
AagrBONN_evm.TU.Sc2ySwM_368.123 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.2e-07 58.2 54 50.0
Pp3c11_10690 Physcomitrium patens HOM05D009897 ORTHO05D000301 5.2e-07 58.2 56 51.8
Pp3c16_1610 Physcomitrium patens HOM05D009897 ORTHO05D308079 2.0e-06 56.2 41 63.4
AagrBONN_evm.TU.Sc2ySwM_117.2151 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.4e-06 55.5 58 46.6
AagrBONN_evm.TU.Sc2ySwM_340.1874 Anthoceros agrestis HOM05D000004 ORTHO05D000301 3.4e-06 55.5 51 54.9
AagrBONN_evm.TU.Sc2ySwM_340.401 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.4e-06 55.5 58 46.6
AagrBONN_evm.TU.Sc2ySwM_1.4 Anthoceros agrestis HOM05D000465 ORTHO05D001982 4.4e-06 55.1 44 59.1
AagrBONN_evm.TU.Sc2ySwM_344.3130 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.4e-06 55.1 48 56.2
CBR_g84170 Chara braunii HOM05D000505 ORTHO05D000301 4.4e-06 55.1 59 40.7
AagrBONN_evm.TU.Sc2ySwM_340.1877 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.7e-06 54.7 48 56.2
Cre05.g235400 Chlamydomonas reinhardtii HOM05D021426 ORTHO05D000301 5.7e-06 54.7 58 48.3
Pp3c2_12520 Physcomitrium patens HOM05D009897 ORTHO05D312055 5.7e-06 54.7 34 70.6
AagrBONN_evm.TU.Sc2ySwM_340.1249 Anthoceros agrestis HOM05D000465 ORTHO05D000301 7.5e-06 54.3 52 50.0
CBR_g26227 Chara braunii HOM05D003248 ORTHO05D000301 7.5e-06 54.3 59 42.4
CBR_g32259 Chara braunii HOM05D000505 ORTHO05D000301 7.5e-06 54.3 59 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3604 Anthoceros agrestis HOM05D000465 ORTHO05D000048 9.8e-06 53.9 37 62.2
AagrBONN_evm.TU.Sc2ySwM_228.5950 Anthoceros agrestis HOM05D000465 ORTHO05D000301 9.8e-06 53.9 37 62.2
AagrBONN_evm.TU.Sc2ySwM_340.1363 Anthoceros agrestis HOM05D000465 ORTHO05D000301 9.8e-06 53.9 44 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3112 Anthoceros agrestis HOM05D000505 ORTHO05D000301 9.8e-06 53.9 58 44.8
AagrBONN_evm.TU.Sc2ySwM_368.1860 Anthoceros agrestis HOM05D000465 ORTHO05D001982 9.8e-06 53.9 37 62.2
CBR_g23536 Chara braunii HOM05D003248 ORTHO05D000301 9.8e-06 53.9 59 40.7
CBR_g8831 Chara braunii HOM05D000505 ORTHO05D000301 9.8e-06 53.9 59 40.7


User provided reference genes

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