Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.6e-228 795.8 679 100.0
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.6e-228 795.8 679 100.0
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 1.2e-31 142.5 157 56.7
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 6.5e-30 136.7 124 61.3
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.1e-29 136.0 164 51.8
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 3.2e-29 134.4 103 67.0
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 5.5e-29 133.7 116 61.2
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 9.4e-29 132.9 116 61.2
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 2.7e-28 131.3 122 58.2
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 6.1e-28 130.2 131 55.7
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 7.9e-28 129.8 103 65.0
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 7.9e-28 129.8 103 65.0
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.8e-27 128.6 101 65.3
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.3e-27 128.3 124 57.3
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.3e-27 128.3 161 51.6
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 2.3e-27 128.3 197 42.1
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.0e-27 127.9 194 46.4
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 3.0e-27 127.9 203 40.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 3.0e-27 127.9 105 66.7
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 3.9e-27 127.5 103 65.0
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 3.9e-27 127.5 136 56.6
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 5.1e-27 127.1 130 57.7
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 5.1e-27 127.1 131 55.0
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 6.7e-27 126.7 132 53.8
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 6.7e-27 126.7 132 53.8
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 6.7e-27 126.7 98 68.4
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 6.7e-27 126.7 116 60.3
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 6.7e-27 126.7 98 68.4
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 6.7e-27 126.7 134 54.5
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 6.7e-27 126.7 158 50.6
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 8.8e-27 126.3 133 57.9
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 8.8e-27 126.3 191 44.0
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.1e-26 125.9 136 55.9
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 1.5e-26 125.6 171 49.7
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 1.5e-26 125.6 138 55.1
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.5e-26 125.6 98 67.3
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-26 125.2 126 55.6
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.0e-26 125.2 137 53.3
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.0e-26 125.2 152 47.4
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 2.6e-26 124.8 125 56.0
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 2.6e-26 124.8 125 56.0
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.6e-26 124.8 118 59.3
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.6e-26 124.8 125 56.8
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 2.6e-26 124.8 130 54.6
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 3.3e-26 124.4 161 50.3
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 3.3e-26 124.4 158 49.4
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 3.3e-26 124.4 148 52.7
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 3.3e-26 124.4 85 72.9
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 3.3e-26 124.4 161 50.3
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 4.4e-26 124.0 85 69.4
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 5.7e-26 123.6 98 65.3
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 5.7e-26 123.6 98 67.3
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 5.7e-26 123.6 165 47.3
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 7.4e-26 123.2 132 54.5
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 7.4e-26 123.2 154 49.4
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 7.4e-26 123.2 158 50.6
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 7.4e-26 123.2 87 72.4
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 9.7e-26 122.9 138 53.6
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 9.7e-26 122.9 85 69.4
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 9.7e-26 122.9 116 57.8
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 9.7e-26 122.9 136 53.7
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.3e-25 122.5 103 63.1
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.3e-25 122.5 193 43.0
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.7e-25 122.1 192 43.2
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 1.7e-25 122.1 163 47.2
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.7e-25 122.1 139 52.5
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.2e-25 121.7 81 72.8
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.2e-25 121.7 81 72.8
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.2e-25 121.7 98 65.3
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 2.2e-25 121.7 85 70.6
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 2.8e-25 121.3 138 53.6
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 4.8e-25 120.6 205 43.4
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 4.8e-25 120.6 103 62.1
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 4.8e-25 120.6 155 47.1
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 6.3e-25 120.2 139 51.1
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 6.3e-25 120.2 139 51.1
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 6.3e-25 120.2 139 51.1
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 6.3e-25 120.2 172 43.6
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 6.3e-25 120.2 115 54.8
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 6.3e-25 120.2 117 59.8
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 8.2e-25 119.8 193 43.0
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.1e-24 119.4 213 41.8
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.1e-24 119.4 182 44.0
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.1e-24 119.4 103 62.1
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.4e-24 119.0 109 57.8
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.4e-24 119.0 158 45.6
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 1.4e-24 119.0 90 65.6
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.8e-24 118.6 134 53.0
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.8e-24 118.6 143 51.7
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.8e-24 118.6 138 53.6
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 2.4e-24 118.2 118 59.3
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 2.4e-24 118.2 118 59.3
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 2.4e-24 118.2 118 59.3
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 2.4e-24 118.2 185 43.2
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 3.1e-24 117.9 119 55.5
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 3.1e-24 117.9 124 53.2
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.1e-24 117.9 130 52.3
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.3e-24 117.1 138 52.9
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 7.0e-24 116.7 193 43.5
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 7.0e-24 116.7 155 47.1
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 2.0e-23 115.2 98 62.2
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 3.5e-23 114.4 138 50.0
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 3.5e-23 114.4 101 59.4
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 5.9e-23 113.6 134 48.5
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 7.7e-23 113.2 194 42.3
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.0e-22 112.8 193 41.5
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-22 112.8 75 70.7
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.3e-22 112.5 193 43.5
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 8.5e-22 109.8 116 52.6
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.1e-21 109.4 145 49.0
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 3.2e-21 107.8 136 48.5
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 3.6e-20 104.4 133 51.1
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 4.7e-20 104.0 83 63.9
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.3e-19 101.7 144 50.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 8.8e-19 99.8 142 47.2
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 4.4e-18 97.4 64 76.6
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 9.7e-18 96.3 83 63.9
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 4.8e-17 94.0 81 60.5
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.1e-13 82.8 87 56.3
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.6e-12 79.0 165 36.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.0e-11 76.3 51 70.6
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 4.0e-11 74.3 121 43.0
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.4e-10 71.2 94 52.1
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 5.7e-10 70.5 52 65.4
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.3e-06 59.3 137 38.0
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 8.5e-06 56.6 34 76.5
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 8.5e-06 56.6 34 76.5


User provided reference genes

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