Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-279 965.3 485 100.0
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.8e-182 641.3 468 69.9
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.0e-179 631.3 488 67.6
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.3e-177 624.4 485 66.0
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 3.1e-151 539.3 500 58.4
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.1e-151 538.9 463 61.3
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.7e-145 518.5 455 60.2
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-127 459.1 452 53.5
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.0e-122 444.5 442 52.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.4e-121 439.1 327 63.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.7e-88 330.9 317 51.4
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.7e-88 330.9 308 51.9
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.4e-87 327.0 308 52.3
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.2e-87 326.6 308 51.6
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 3.2e-87 326.6 308 51.3
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 5.4e-87 325.9 312 51.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 9.2e-87 325.1 307 50.8
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.7e-86 323.6 310 51.3
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 4.6e-86 322.8 307 51.8
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 6.0e-86 322.4 308 50.6
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.0e-86 322.4 308 50.6
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 7.8e-86 322.0 308 50.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.0e-85 321.6 308 51.9
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.0e-85 321.6 316 49.4
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.0e-85 321.6 308 50.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.9e-85 319.7 334 49.1
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.0e-85 319.3 309 50.2
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.3e-84 316.2 308 50.3
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 5.6e-84 315.8 334 47.3
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 5.6e-84 315.8 316 48.7
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 7.3e-84 315.5 307 49.8
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 7.3e-84 315.5 307 49.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 9.5e-84 315.1 307 50.8
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.6e-83 314.3 317 47.9
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.6e-83 313.2 316 48.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 4.7e-83 312.8 213 72.3
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.4e-82 311.2 308 50.3
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.4e-82 311.2 308 48.7
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.3e-82 310.5 311 48.6
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 2.3e-82 310.5 314 49.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.3e-82 310.5 338 46.2
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.1e-82 310.1 315 46.7
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 4.0e-82 309.7 308 50.0
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 6.8e-82 308.9 308 48.7
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.2e-81 308.1 308 48.7
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.5e-81 307.8 309 49.2
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.0e-81 307.4 309 48.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.0e-81 307.4 309 48.9
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 2.0e-81 307.4 308 48.1
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.4e-81 306.2 314 49.4
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.4e-81 306.2 308 50.0
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.4e-81 306.2 321 48.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 5.8e-81 305.8 308 48.7
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 5.8e-81 305.8 316 47.8
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 7.5e-81 305.4 315 48.3
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.7e-80 304.3 311 49.2
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.7e-80 304.3 310 50.3
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 3.7e-80 303.1 308 48.1
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 4.9e-80 302.8 315 48.9
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.4e-79 301.2 308 48.7
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.9e-79 300.8 319 46.4
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.2e-79 300.1 308 49.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.1e-79 299.7 308 48.4
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 5.4e-79 299.3 308 48.4
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 7.1e-79 298.9 312 46.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 9.2e-79 298.5 308 48.4
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.2e-78 298.1 310 48.4
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.6e-78 297.7 288 50.3
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.7e-78 297.0 330 45.8
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 6.0e-78 295.8 308 47.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.3e-77 293.9 316 46.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.0e-77 293.5 333 44.4
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.0e-77 293.5 311 48.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.9e-76 290.8 294 47.3
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 3.3e-76 290.0 308 47.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 1.2e-75 288.1 308 47.7
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.6e-75 287.7 306 47.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.6e-75 287.7 308 48.1
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.1e-75 287.3 308 47.7
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.8e-75 287.0 330 44.8
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 4.0e-74 283.1 318 45.3
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 6.8e-74 282.3 307 46.6
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.2e-73 281.6 317 43.5
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.6e-73 280.4 277 49.5
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 4.4e-73 279.6 305 45.9
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 5.8e-73 279.3 316 45.3
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 6.4e-72 275.8 308 43.2
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 8.4e-72 275.4 320 44.4
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.4e-71 274.6 273 49.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.4e-71 273.9 288 48.6
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.4e-71 273.9 290 47.6
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.2e-71 273.1 309 44.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.5e-70 270.0 335 43.0
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.9e-68 264.2 327 44.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 4.3e-68 263.1 308 42.9
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.2e-67 261.5 258 50.4
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.2e-67 261.5 290 46.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 6.9e-66 255.8 311 43.7
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.0e-61 241.9 254 48.8
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 1.5e-60 238.0 309 40.8
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 5.6e-60 236.1 234 49.6
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.4e-57 226.9 240 48.3
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.4e-55 220.7 307 41.4
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.4e-47 194.9 310 33.9
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.2e-47 193.7 223 43.9
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.9e-44 184.5 217 43.8
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.8e-37 161.4 311 30.5
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.5e-36 157.5 312 30.8
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 5.5e-23 113.2 103 50.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 5.5e-15 86.7 124 41.9
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.7e-12 76.6 113 36.3


User provided reference genes

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