Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_32730 Physcomitrium patens HOM05D001109 ORTHO05D001051 9.8e-181 636.7 331 100.0
Pp3c4_8950 Physcomitrium patens HOM05D001109 ORTHO05D001051 4.5e-69 265.8 228 60.1
Pp3c12_16910 Physcomitrium patens HOM05D001109 ORTHO05D001051 7.5e-64 248.4 211 60.2
Pp3c22_3410 Physcomitrium patens HOM05D001109 ORTHO05D001051 2.3e-28 130.6 310 34.2
Mapoly0133s0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 2.1e-26 124.0 308 33.4
AagrBONN_evm.TU.Sc2ySwM_228.4654 Anthoceros agrestis HOM05D000865 ORTHO05D000739 3.2e-22 110.2 130 43.8
SEGI_39709 Sequoiadendron giganteum HOM05D002301 ORTHO05D002316 3.2e-22 110.2 219 33.3
Pp3c18_18780 Physcomitrium patens HOM05D001109 ORTHO05D001051 3.3e-19 100.1 306 29.7
SMO115G0119 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 8.9e-17 92.0 131 37.4
AagrBONN_evm.TU.Sc2ySwM_362.792 Anthoceros agrestis HOM05D001109 ORTHO05D002316 1.2e-16 91.7 179 35.8
Pp3c21_10380 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.7e-15 87.8 182 34.6
Nn4g22573 Nelumbo nucifera HOM05D002301 ORTHO05D002316 3.8e-15 86.7 219 29.7
MapolyY_B0034 Marchantia polymorpha HOM05D001109 ORTHO05D001051 1.1e-14 85.1 99 42.4
MapolyY_B0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 4.6e-13 79.7 130 33.8
Pp3c15_1020 Physcomitrium patens HOM05D002301 ORTHO05D011777 1.7e-12 77.8 142 33.8
Pp3c15_1040 Physcomitrium patens HOM05D002301 ORTHO05D011777 1.7e-12 77.8 142 33.8
Pp3c15_1050 Physcomitrium patens HOM05D002301 ORTHO05D011777 1.7e-12 77.8 142 33.8
SEGI_26923 Sequoiadendron giganteum HOM05D001109 ORTHO05D001051 1.7e-12 77.8 176 27.8
Gohir.A08G217700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 2.3e-12 77.4 175 28.0
AagrBONN_evm.TU.Sc2ySwM_362.737 Anthoceros agrestis HOM05D001109 ORTHO05D001051 6.6e-12 75.9 237 28.3
CsaV3_2G009950 Cucumis sativus L. HOM05D001109 ORTHO05D001051 8.7e-12 75.5 151 29.8
Pp3c18_18670 Physcomitrium patens HOM05D000865 ORTHO05D000739 8.7e-12 75.5 199 26.6
Gohir.D08G234700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.9e-11 74.3 140 30.0
Gorai.004G249500 Gossypium raimondii HOM05D001109 ORTHO05D001051 1.9e-11 74.3 140 30.0
Pp3c2_20180 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.9e-11 74.3 180 30.0
SMO351G0155 Selaginella moellendorffii HOM05D001109 ORTHO05D002316 3.3e-11 73.6 150 32.0
MELO3C008645.2 Cucumis melo HOM05D001109 ORTHO05D001051 5.6e-11 72.8 149 29.5
Duzib106G0605 Durio zibethinus HOM05D001109 ORTHO05D001051 7.3e-11 72.4 142 28.2
Duzib106G0960 Durio zibethinus HOM05D001109 ORTHO05D001051 7.3e-11 72.4 142 28.2
Medtr1g045780 Medicago truncatula HOM05D001109 ORTHO05D001051 7.3e-11 72.4 150 29.3
CSS0007005 Camellia sinensis var. sinensis HOM05D001109 ORTHO05D001051 9.6e-11 72.0 164 25.6
ClCG11G010410 Citrullus lanatus HOM05D001109 ORTHO05D001051 9.6e-11 72.0 151 28.5
Gohir.A08G221618 Gossypium hirsutum HOM05D001109 ORTHO05D001051 9.6e-11 72.0 131 27.5
FAN03G1135 Fragaria x ananassa HOM05D001109 ORTHO05D001051 1.6e-10 71.2 178 28.1
Lj5g0018572 Lotus japonicus HOM05D001109 ORTHO05D001051 1.6e-10 71.2 138 31.2
Nitab4.5_0008375g0040 Nicotiana tabacum HOM05D001109 ORTHO05D001051 1.6e-10 71.2 149 29.5
Gorai.004G254600 Gossypium raimondii HOM05D001109 ORTHO05D001051 2.1e-10 70.9 131 26.7
Duzib138G0142 Durio zibethinus HOM05D001109 ORTHO05D001051 2.8e-10 70.5 135 27.4
FvH4_7g15700 Fragaria vesca HOM05D001109 ORTHO05D001051 2.8e-10 70.5 178 27.0
FAN06G0693 Fragaria x ananassa HOM05D001109 ORTHO05D001051 2.8e-10 70.5 178 27.0
FAN06G2199 Fragaria x ananassa HOM05D001109 ORTHO05D001051 2.8e-10 70.5 178 27.0
Gohir.A12G110100 Gossypium hirsutum HOM05D001109 ORTHO05D001051 2.8e-10 70.5 132 31.8
Thecc.01G349500 Theobroma cacao HOM05D001109 ORTHO05D001051 2.8e-10 70.5 141 31.2
Duzib128G1097 Durio zibethinus HOM05D001109 ORTHO05D001051 3.6e-10 70.1 142 27.5
Mapoly0104s0027 Marchantia polymorpha HOM05D001109 ORTHO05D000739 3.6e-10 70.1 186 30.1
FAN01G2402 Fragaria x ananassa HOM05D001109 ORTHO05D001051 4.8e-10 69.7 178 27.5
FAN10G0645 Fragaria x ananassa HOM05D001109 ORTHO05D001051 4.8e-10 69.7 178 28.1
TAR626G0001 Trochodendron aralioides HOM05D001109 ORTHO05D011777 4.8e-10 69.7 134 32.1
Aqoxy7G00224 Aquilegia oxysepala HOM05D001109 ORTHO05D001051 6.2e-10 69.3 132 30.3
FAN10G2442 Fragaria x ananassa HOM05D001109 ORTHO05D001051 6.2e-10 69.3 178 28.1
Gorai.008G122700 Gossypium raimondii HOM05D001109 ORTHO05D001051 6.2e-10 69.3 132 31.1
Pp3c14_12090 Physcomitrium patens HOM05D001109 ORTHO05D001051 6.2e-10 69.3 137 31.4
Cc09_g02900 Coffea canephora HOM05D001109 ORTHO05D001051 8.1e-10 68.9 134 29.1
Peaxi162Scf00156g00922 Petunia axillaris HOM05D001109 ORTHO05D001051 8.1e-10 68.9 141 27.7
Gohir.D11G255901 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.8e-09 67.8 144 29.9
Gohir.D12G113100 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.8e-09 67.8 132 31.1
Gorai.007G274200 Gossypium raimondii HOM05D001109 ORTHO05D001051 1.8e-09 67.8 144 29.9
Migut.N01575 Erythranthe guttata HOM05D001109 ORTHO05D001051 2.4e-09 67.4 135 31.1
Lj6g0026573 Lotus japonicus HOM05D001109 ORTHO05D001051 2.4e-09 67.4 151 28.5
Mapoly0015s0136 Marchantia polymorpha HOM05D001109 ORTHO05D000739 2.4e-09 67.4 139 31.7
Ciclev10021815m.g Citrus clementina HOM05D001109 ORTHO05D001051 4.0e-09 66.6 128 27.3
Lj2C45T9 Lonicera japonica HOM05D001109 ORTHO05D001051 4.0e-09 66.6 141 29.8
Mapoly0005s0112 Marchantia polymorpha HOM05D001109 ORTHO05D000739 4.0e-09 66.6 130 29.2
Mapoly0005s0113 Marchantia polymorpha HOM05D001109 ORTHO05D000739 4.0e-09 66.6 130 29.2
RcHm_v2.0_Chr1g0358431 Rosa chinensis HOM05D001109 ORTHO05D001051 5.3e-09 66.2 187 26.7
Dinv43883 Davidia involucrata HOM05D003005 ORTHO05D004170 6.9e-09 65.9 132 29.5
Aa31LG5G3990 Aethionema arabicum HOM05D001109 ORTHO05D001051 9.0e-09 65.5 149 28.2
Nitab4.5_0013021g0020 Nicotiana tabacum HOM05D001109 ORTHO05D001051 9.0e-09 65.5 128 28.9
Rhsim07G0186400 Rhododendron simsii HOM05D000865 ORTHO05D000739 9.0e-09 65.5 209 26.8
Solyc05g055920.4 Solanum lycopersicum HOM05D001109 ORTHO05D001051 9.0e-09 65.5 140 25.7
Sopen05g034320 Solanum pennellii HOM05D001109 ORTHO05D001051 9.0e-09 65.5 140 25.7
TWI36G1547 Tripterygium wilfordii HOM05D001109 ORTHO05D001051 9.0e-09 65.5 136 30.9
TAR330G0002 Trochodendron aralioides HOM05D001109 ORTHO05D001051 9.0e-09 65.5 131 28.2
Ca_11881_v3 Cicer arietinum L. HOM05D001109 ORTHO05D001051 1.2e-08 65.1 150 30.0
PGR042G3249 Punica granatum HOM05D001109 ORTHO05D001051 1.5e-08 64.7 132 28.0
SEGI_31534 Sequoiadendron giganteum HOM05D001109 ORTHO05D002124 1.5e-08 64.7 135 29.6
MSTRG.4176 Avicennia marina HOM05D001109 ORTHO05D001051 2.0e-08 64.3 147 27.2
Oeu051338.1 Olea europaea HOM05D001109 ORTHO05D001051 2.6e-08 63.9 145 29.0
ATR0680G098 Amborella trichopoda HOM05D002301 ORTHO05D002316 3.4e-08 63.5 131 32.8
Solyc07g008070.1 Solanum lycopersicum HOM05D001109 ORTHO05D001051 3.4e-08 63.5 131 27.5
Sopen07g003950 Solanum pennellii HOM05D001109 ORTHO05D001051 3.4e-08 63.5 131 27.5
Hma1.2p1_0384F.1_g140860 Hydrangea macrophylla HOM05D001109 ORTHO05D001051 4.5e-08 63.2 132 27.3
MD01G1073700 Malus domestica HOM05D001109 ORTHO05D001051 4.5e-08 63.2 129 31.0
MD05G1286300 Malus domestica HOM05D001109 ORTHO05D011777 4.5e-08 63.2 135 29.6
arahy.Tifrunner.gnm1.ann1.CT9WHN Arachis hypogaea HOM05D001109 ORTHO05D001051 5.8e-08 62.8 145 28.3
CSS0011580 Camellia sinensis var. sinensis HOM05D001109 ORTHO05D001051 5.8e-08 62.8 142 27.5
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 5.8e-08 62.8 186 26.3
Psat6g107680 Pisum sativum HOM05D001109 ORTHO05D001051 5.8e-08 62.8 150 28.7
THA.LOC104826097 Tarenaya hassleriana HOM05D001109 ORTHO05D001051 5.8e-08 62.8 151 27.2
vmacro20871 Vaccinium macrocarpon HOM05D001109 ORTHO05D001051 5.8e-08 62.8 132 27.3
HanXRQChr03g0080821 Helianthus annuus HOM05D000865 ORTHO05D000739 7.6e-08 62.4 200 24.5
TPR.G23988 Trifolium pratense HOM05D001109 ORTHO05D001051 7.6e-08 62.4 149 24.8
arahy.Tifrunner.gnm1.ann1.E6I8MS Arachis hypogaea HOM05D001109 ORTHO05D001051 9.9e-08 62.0 145 28.3
CARHR249100 Cardamine hirsuta HOM05D001109 ORTHO05D001051 9.9e-08 62.0 136 25.7
Duzib160G0840 Durio zibethinus HOM05D001109 ORTHO05D011777 9.9e-08 62.0 151 31.8
Thhalv10028892m.g Eutrema salsugineum HOM05D001109 ORTHO05D001051 9.9e-08 62.0 136 25.7
Oeu004922.1 Olea europaea HOM05D001109 ORTHO05D001051 9.9e-08 62.0 129 27.1
Prupe.4G078600 Prunus persica HOM05D001109 ORTHO05D011777 9.9e-08 62.0 159 25.8
SalBow1G6404 Salvia bowleyana HOM05D001109 ORTHO05D001051 9.9e-08 62.0 149 28.9
DCAR_025234 Daucus carota HOM05D001109 ORTHO05D001051 1.3e-07 61.6 145 24.8
Dinv32272 Davidia involucrata HOM05D001109 ORTHO05D011777 1.7e-07 61.2 134 30.6
Nn4g26541 Nelumbo nucifera HOM05D001109 ORTHO05D011777 1.7e-07 61.2 151 29.1
Oeu059394.1 Olea europaea HOM05D001109 ORTHO05D001051 1.7e-07 61.2 147 26.5
Sed0013569 Sechium edule HOM05D001109 ORTHO05D001051 1.7e-07 61.2 164 25.0
Nitab4.5_0000305g0300 Nicotiana tabacum HOM05D001109 ORTHO05D001051 2.2e-07 60.8 137 26.3
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 2.2e-07 60.8 186 26.9
Sc11g0008450 Simmondsia chinensis HOM05D001109 ORTHO05D001051 2.2e-07 60.8 87 33.3
Eucgr.E00081 Eucalyptus grandis HOM05D001109 ORTHO05D001051 2.9e-07 60.5 136 25.7
Lalb_Chr18g0051731 Lupinus albus HOM05D000865 ORTHO05D000739 2.9e-07 60.5 134 28.4
PGSC0003DMG400030915 Solanum tuberosum HOM05D001109 ORTHO05D001051 2.9e-07 60.5 129 26.4
TPR.G26844 Trifolium pratense HOM05D000865 ORTHO05D000739 2.9e-07 60.5 192 26.6
Glyma.09G045700 Glycine max HOM05D000865 ORTHO05D000739 3.8e-07 60.1 191 24.6
Nn3g20695 Nelumbo nucifera HOM05D001109 ORTHO05D011777 3.8e-07 60.1 134 27.6
PSO384G1490 Papaver somniferum HOM05D002301 ORTHO05D002316 3.8e-07 60.1 140 31.4
CAN.G484.84 Capsicum annuum HOM05D001109 ORTHO05D001051 6.4e-07 59.3 135 27.4
Lj6g0011988 Lotus japonicus HOM05D000865 ORTHO05D000739 6.4e-07 59.3 185 26.5
Nn4g25897 Nelumbo nucifera HOM05D000865 ORTHO05D000739 6.4e-07 59.3 132 30.3
Nitab4.5_0002344g0080 Nicotiana tabacum HOM05D000865 ORTHO05D000739 6.4e-07 59.3 188 25.0
Pp3c15_8180 Physcomitrium patens HOM05D023949 ORTHO05D000739 6.4e-07 59.3 160 30.6
Rhsim01G0168900 Rhododendron simsii HOM05D001109 ORTHO05D001051 6.4e-07 59.3 130 26.9
FvH4_3g05810 Fragaria vesca HOM05D001109 ORTHO05D011777 8.4e-07 58.9 136 27.2
Cc00_g01750 Coffea canephora HOM05D001109 ORTHO05D001051 1.1e-06 58.5 142 24.6
Duzib052G0438 Durio zibethinus HOM05D000865 ORTHO05D000739 1.1e-06 58.5 188 25.0
Duzib147G0441 Durio zibethinus HOM05D001109 ORTHO05D001051 1.1e-06 58.5 106 32.1
Peaxi162Scf00037g00096 Petunia axillaris HOM05D000865 ORTHO05D000739 1.1e-06 58.5 184 23.9
Psat1g152800 Pisum sativum HOM05D000865 ORTHO05D000739 1.1e-06 58.5 195 26.2
GSVIVG01028889001 Vitis vinifera HOM05D000277 ORTHO05D006364 1.1e-06 58.5 135 31.9
Aqoxy4G00626 Aquilegia oxysepala HOM05D001109 ORTHO05D011777 1.4e-06 58.2 141 27.7
EL10Ac1g00332 Beta vulgaris HOM05D001109 ORTHO05D001051 1.4e-06 58.2 136 25.7
Cpa.g.sc184.8 Carica papaya HOM05D001109 ORTHO05D001051 1.4e-06 58.2 131 25.2
DCAR_030533 Daucus carota HOM05D000865 ORTHO05D000739 1.4e-06 58.2 185 24.3
Glyma.20G081900 Glycine max HOM05D001109 ORTHO05D001051 1.4e-06 58.2 143 25.9
SalBow1G8496 Salvia bowleyana HOM05D001109 ORTHO05D001051 1.4e-06 58.2 149 28.2
SEGI_10261 Sequoiadendron giganteum HOM05D000865 ORTHO05D000739 1.4e-06 58.2 144 25.0
PSO339G6346 Papaver somniferum HOM05D002301 ORTHO05D002316 1.9e-06 57.8 129 31.8
Nitab4.5_0014335g0010 Nicotiana tabacum HOM05D000865 ORTHO05D000739 2.4e-06 57.4 130 26.9
PGSC0003DMG400008289 Solanum tuberosum HOM05D001109 ORTHO05D011777 2.4e-06 57.4 177 26.6
TAR626G0715 Trochodendron aralioides HOM05D001109 ORTHO05D001051 2.4e-06 57.4 141 25.5
Hma1.2p1_1374F.1_g278910 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 3.2e-06 57.0 132 28.8
Pp3c7_13100 Physcomitrium patens HOM05D023949 ORTHO05D000739 3.2e-06 57.0 130 30.8
TAR374G0163 Trochodendron aralioides HOM05D002301 ORTHO05D002316 3.2e-06 57.0 131 29.0
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 4.2e-06 56.6 152 24.3
EL10Ac7g17489 Beta vulgaris HOM05D000865 ORTHO05D000739 4.2e-06 56.6 190 28.9
AUR62000627 Chenopodium quinoa HOM05D001109 ORTHO05D001051 4.2e-06 56.6 131 26.7
ECA236G3171 Erigeron canadensis HOM05D002301 ORTHO05D002316 4.2e-06 56.6 190 26.3
Lalb_Chr15g0083531 Lupinus albus HOM05D000865 ORTHO05D000739 4.2e-06 56.6 202 25.7
Thecc.04G025400 Theobroma cacao HOM05D001109 ORTHO05D001051 4.2e-06 56.6 132 26.5
Gohir.A05G149500 Gossypium hirsutum HOM05D001109 ORTHO05D011777 5.4e-06 56.2 139 29.5
Nn7g37339 Nelumbo nucifera HOM05D001109 ORTHO05D001051 5.4e-06 56.2 87 33.3
Nitab4.5_0006471g0020 Nicotiana tabacum HOM05D001109 ORTHO05D001051 5.4e-06 56.2 132 28.0
SMO340G0080 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 5.4e-06 56.2 153 24.2
Nitab4.5_0000061g0060 Nicotiana tabacum HOM05D001109 ORTHO05D001051 7.1e-06 55.8 131 26.7
Sed0001218 Sechium edule HOM05D001109 ORTHO05D001051 7.1e-06 55.8 131 28.2
THA.LOC104803088 Tarenaya hassleriana HOM05D000865 ORTHO05D000739 7.1e-06 55.8 87 32.2
VMungo0720G0550 Vigna mungo HOM05D001109 ORTHO05D001051 7.1e-06 55.8 151 25.8
COL.COLO4_29200 Corchorus olitorius HOM05D001109 ORTHO05D001051 9.3e-06 55.5 102 25.5


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