Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 7.8e-186 653.7 334 100.0
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 1.7e-92 343.6 270 67.4
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 3.0e-76 289.7 225 68.4
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 2.8e-58 229.9 215 54.4
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 4.7e-58 229.2 251 48.6
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.4e-57 227.6 216 54.6
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 1.8e-57 227.3 216 54.6
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 4.4e-56 222.6 219 53.0
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 5.8e-56 222.2 215 54.0
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 9.9e-56 221.5 215 53.5
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 1.3e-55 221.1 217 53.0
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.3e-55 221.1 220 51.8
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.7e-55 220.7 215 53.0
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.7e-55 220.7 215 53.0
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 2.9e-55 219.9 210 52.9
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 2.9e-55 219.9 215 53.0
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 2.9e-55 219.9 215 53.5
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.9e-55 219.9 214 53.3
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 4.9e-55 219.2 220 51.4
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 6.4e-55 218.8 213 53.5
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 2.4e-54 216.9 215 53.0
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.4e-54 216.9 207 54.1
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 2.4e-54 216.9 230 50.4
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 2.4e-54 216.9 213 52.6
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 4.1e-54 216.1 234 48.3
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 7.1e-54 215.3 215 52.1
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 9.2e-54 214.9 200 54.5
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.6e-53 214.2 217 52.1
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 2.1e-53 213.8 215 52.6
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 2.7e-53 213.4 205 53.7
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.5e-53 213.0 217 52.1
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.5e-53 213.0 273 45.1
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 4.6e-53 212.6 214 49.1
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 6.0e-53 212.2 215 52.1
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 6.0e-53 212.2 216 52.3
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 7.8e-53 211.8 213 53.1
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 7.8e-53 211.8 215 51.6
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 1.0e-52 211.5 299 43.1
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.3e-52 211.1 215 51.6
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 1.3e-52 211.1 215 52.1
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 3.9e-52 209.5 215 50.7
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 5.1e-52 209.1 215 52.1
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 6.6e-52 208.8 215 52.1
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 6.6e-52 208.8 214 50.9
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 6.6e-52 208.8 215 52.1
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 8.6e-52 208.4 218 50.9
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 1.1e-51 208.0 200 53.5
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.5e-51 207.6 215 51.2
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 1.9e-51 207.2 218 50.9
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 2.5e-51 206.8 214 50.9
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 5.6e-51 205.7 213 50.7
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 5.6e-51 205.7 218 51.4
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 5.6e-51 205.7 218 50.0
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 7.3e-51 205.3 268 44.0
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 7.3e-51 205.3 218 50.5
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 9.6e-51 204.9 218 51.4
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.2e-50 204.5 215 50.2
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 1.6e-50 204.1 215 50.7
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 2.8e-50 203.4 183 54.1
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.7e-50 202.6 220 50.5
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 6.2e-50 202.2 284 43.3
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 8.1e-50 201.8 216 51.4
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.8e-49 200.7 213 50.2
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 4.0e-49 199.5 188 54.3
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 5.2e-49 199.1 214 49.1
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 5.2e-49 199.1 216 49.1
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 6.9e-49 198.7 215 50.7
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 6.9e-49 198.7 259 45.9
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 6.9e-49 198.7 215 49.3
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 8.9e-49 198.4 210 51.4
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.2e-48 198.0 221 48.9
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.5e-48 197.6 210 50.5
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 2.0e-48 197.2 278 41.7
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.6e-48 196.8 222 46.8
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 2.6e-48 196.8 218 50.0
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 2.6e-48 196.8 213 49.3
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 3.4e-48 196.4 274 43.1
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 3.4e-48 196.4 212 47.6
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 4.4e-48 196.1 225 48.4
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 9.9e-48 194.9 233 44.2
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 9.9e-48 194.9 188 53.2
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.9e-46 190.7 190 53.2
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 9.3e-46 188.3 215 47.9
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.2e-45 188.0 215 50.7
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 2.7e-45 186.8 203 48.3
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 6.0e-45 185.7 242 45.5
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 3.9e-44 183.0 201 48.3
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 4.3e-43 179.5 219 46.1
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 5.6e-43 179.1 292 38.7
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 5.3e-41 172.6 215 44.7
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 9.0e-41 171.8 184 48.4
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.5e-40 171.0 192 47.4
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 2.0e-40 170.6 221 46.6
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 2.0e-40 170.6 175 48.6
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 7.6e-40 168.7 181 48.6
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.7e-39 167.5 178 48.9
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.2e-38 163.3 252 42.5
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.2e-38 163.3 252 42.5
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 3.2e-38 163.3 204 44.6
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 7.9e-37 158.7 298 36.6
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 3.9e-36 156.4 306 35.3
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 7.4e-35 152.1 236 39.8
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.4e-33 147.9 212 39.6
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 3.1e-33 146.7 161 48.4
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.9e-27 127.5 133 49.6
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.5e-27 127.1 151 47.0
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 8.1e-26 122.1 133 47.4
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 2.0e-24 117.5 181 39.2
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.4e-22 111.3 197 37.6
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 6.0e-21 105.9 115 50.4
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 7.9e-21 105.5 171 33.3
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 7.9e-21 105.5 172 38.4
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 9.6e-19 98.6 243 32.9
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 5.9e-16 89.4 86 54.7
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.7e-15 87.8 88 51.1
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.3e-12 78.2 70 55.7
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 1.6e-10 71.2 65 58.5
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.4e-09 68.2 59 64.4
Pp3c8_1430 Physcomitrium patens HOM05D006516 ORTHO05D313492 1.7e-07 61.2 77 45.5
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 8.5e-07 58.9 46 56.5


User provided reference genes

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