Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 7.5e-211 736.9 358 100.0
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 5.3e-164 581.3 356 75.8
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 9.9e-155 550.4 356 71.6
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.9e-153 546.2 356 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 2.9e-146 522.3 360 68.3
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 4.9e-146 521.5 359 68.8
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.1e-145 520.4 357 69.5
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 2.5e-145 519.2 358 69.3
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.2e-145 518.5 359 69.4
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.1e-144 516.2 358 68.4
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.1e-144 516.2 357 69.2
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.7e-144 515.8 358 68.4
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 3.5e-144 515.4 358 68.4
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 3.5e-144 515.4 358 68.4
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 3.5e-144 515.4 358 68.4
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 6.0e-144 514.6 357 68.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.0e-143 513.8 358 68.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.0e-143 513.8 357 68.6
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-143 513.5 358 68.2
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.3e-143 513.5 357 68.6
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.3e-143 513.5 358 67.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.3e-143 513.5 357 67.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.3e-143 512.7 357 68.3
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.3e-143 512.7 358 68.2
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.3e-143 512.7 357 67.2
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.3e-143 512.7 357 67.5
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 3.9e-143 511.9 358 68.7
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 3.9e-143 511.9 358 69.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 5.1e-143 511.5 357 68.1
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 8.7e-143 510.8 357 68.1
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 8.7e-143 510.8 357 67.5
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 8.7e-143 510.8 358 67.6
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.5e-142 510.0 357 67.2
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.9e-142 509.6 357 66.4
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.9e-142 509.6 357 68.1
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 3.3e-142 508.8 361 67.3
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.3e-142 508.8 358 67.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 3.3e-142 508.8 357 68.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.3e-142 508.8 359 67.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.3e-142 508.4 357 67.5
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 5.7e-142 508.1 357 66.7
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 5.7e-142 508.1 357 67.5
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.7e-142 508.1 357 66.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 7.4e-142 507.7 356 68.0
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 7.4e-142 507.7 358 67.6
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.3e-141 506.9 358 67.0
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-141 506.9 358 67.3
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-141 506.9 358 67.3
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.3e-141 506.9 359 67.4
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.3e-141 506.9 358 67.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.3e-141 506.9 357 68.3
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.6e-141 506.5 357 66.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.6e-141 506.5 357 66.1
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.6e-141 506.5 357 67.5
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.7e-141 505.4 357 66.9
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 3.7e-141 505.4 359 67.7
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 4.8e-141 505.0 357 66.1
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 6.3e-141 504.6 358 67.3
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 6.3e-141 504.6 358 67.0
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 6.3e-141 504.6 357 66.1
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-140 503.8 358 66.5
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.4e-140 503.4 358 66.8
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.4e-140 503.4 357 66.7
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 2.4e-140 502.7 358 66.5
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.1e-140 502.3 356 66.0
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 3.1e-140 502.3 357 66.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.2e-139 500.4 358 65.9
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.2e-139 500.4 357 66.9
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 1.5e-139 500.0 357 66.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 2.0e-139 499.6 357 65.5
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 3.4e-139 498.8 394 62.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 5.9e-139 498.0 357 66.4
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 7.6e-139 497.7 354 66.4
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.0e-138 497.3 358 65.9
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.3e-138 496.9 355 65.9
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.3e-138 496.9 355 65.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.7e-138 496.5 355 65.9
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.9e-138 495.7 357 65.5
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.9e-138 495.7 355 65.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 3.8e-138 495.4 358 66.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 5.0e-138 495.0 358 65.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 6.5e-138 494.6 387 63.6
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 6.5e-138 494.6 358 65.1
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.4e-137 493.4 383 62.4
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.4e-137 493.4 358 65.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 3.2e-137 492.3 357 65.8
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.6e-136 490.0 355 65.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 7.9e-136 487.6 368 64.1
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.3e-135 486.9 368 63.0
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 8.7e-135 484.2 345 66.7
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.1e-134 483.8 370 61.1
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 4.3e-134 481.9 358 64.2
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.3e-133 480.3 356 63.8
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.4e-132 476.1 370 59.2
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.1e-132 475.7 424 56.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 7.7e-131 471.1 358 62.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.3e-130 470.3 399 58.4
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 3.2e-129 465.7 415 56.6
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.2e-128 463.8 333 67.0
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.1e-128 461.5 356 62.4
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 6.5e-122 441.4 297 69.7
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 2.6e-118 429.5 292 68.5
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.1e-116 422.2 358 57.5
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 3.6e-112 409.1 307 64.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 5.2e-111 405.2 311 65.0
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.7e-107 392.9 358 57.0
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 8.0e-104 381.3 407 49.1
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.4e-103 380.6 358 53.9
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 3.0e-103 379.4 244 73.8
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.3e-101 371.7 233 76.0
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 4.2e-97 359.0 233 71.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 4.0e-87 325.9 369 48.5
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.0e-83 313.5 201 74.6
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.9e-76 290.4 215 62.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.2e-61 240.4 164 71.3
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 4.9e-45 186.0 151 56.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.2e-43 181.4 158 55.1
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 6.0e-43 179.1 326 36.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.4e-33 145.6 121 53.7
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 9.6e-33 145.2 130 53.8
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.6e-32 144.4 199 40.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.6e-30 137.1 98 68.4
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.7e-27 127.1 98 61.2
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-18 98.2 52 76.9
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.7e-13 81.3 79 51.9
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 5.0e-13 79.7 104 45.2
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 9.4e-12 75.5 37 81.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.7e-11 73.9 46 67.4
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.8e-08 63.9 215 29.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 5.3e-07 59.7 162 32.7


User provided reference genes

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