Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 9.7e-220 766.9 512 100.0
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 4.0e-48 196.8 374 36.4
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 3.2e-45 187.2 381 34.1
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 2.7e-44 184.1 382 37.2
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 3.5e-44 183.7 351 37.3
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 3.5e-44 183.7 382 34.8
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 6.0e-44 183.0 375 34.4
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.0e-43 182.2 381 36.0
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.7e-43 181.4 352 37.2
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 2.3e-43 181.0 371 37.2
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 3.9e-43 180.3 388 34.8
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 5.0e-43 179.9 390 35.1
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 6.6e-43 179.5 384 33.3
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 8.6e-43 179.1 383 35.2
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 4.3e-42 176.8 392 34.9
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.5e-42 175.6 390 34.6
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 2.1e-41 174.5 379 34.8
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 3.6e-41 173.7 381 33.3
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 4.7e-41 173.3 379 35.9
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 8.1e-41 172.6 384 34.1
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.4e-40 171.8 372 34.4
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 5.2e-40 169.9 375 36.3
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 5.2e-40 169.9 385 35.8
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 6.8e-40 169.5 380 33.9
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 6.8e-40 169.5 380 33.9
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.2e-39 168.7 377 35.5
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 2.0e-39 167.9 375 34.1
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 5.8e-39 166.4 374 34.2
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 7.5e-39 166.0 378 33.6
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 7.5e-39 166.0 377 34.5
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 9.9e-39 165.6 383 33.7
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 1.7e-38 164.9 375 31.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.2e-38 164.5 370 34.9
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 2.9e-38 164.1 377 34.2
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 2.9e-38 164.1 376 32.2
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 2.9e-38 164.1 383 33.9
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 3.7e-38 163.7 382 33.0
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.7e-38 163.7 369 31.2
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 8.3e-38 162.5 375 32.5
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 1.1e-37 162.2 374 33.2
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 1.4e-37 161.8 375 33.9
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 1.9e-37 161.4 380 32.9
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 2.4e-37 161.0 377 36.1
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.2e-37 160.6 402 33.6
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.2e-36 158.7 339 32.2
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 1.6e-36 158.3 390 32.1
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 1.6e-36 158.3 376 33.2
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 2.1e-36 157.9 384 32.3
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 4.6e-36 156.8 379 32.2
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 6.0e-36 156.4 373 34.0
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 1.0e-35 155.6 377 31.6
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.3e-35 155.2 374 31.3
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.3e-35 155.2 374 30.5
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 2.3e-35 154.5 386 34.5
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.3e-35 154.5 373 30.6
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 3.0e-35 154.1 378 30.2
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 5.1e-35 153.3 375 31.2
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 6.6e-35 152.9 387 33.3
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 1.5e-34 151.8 375 30.4
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.9e-34 151.4 374 33.4
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 3.3e-34 150.6 383 33.2
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 4.3e-34 150.2 384 33.1
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 5.6e-34 149.8 380 32.1
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 9.5e-34 149.1 372 32.5
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.2e-33 148.7 382 31.9
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 1.2e-33 148.7 382 31.4
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 1.2e-33 148.7 375 32.8
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.2e-33 148.7 366 33.3
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 3.6e-33 147.1 394 30.7
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 4.7e-33 146.7 377 34.0
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 6.2e-33 146.4 397 30.7
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 8.1e-33 146.0 376 30.1
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 3.1e-32 144.1 377 32.1
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 5.2e-32 143.3 377 30.8
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 5.2e-32 143.3 376 31.6
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 5.2e-32 143.3 385 32.7
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.2e-31 142.1 385 31.4
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 9.9e-31 139.0 383 30.8
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 1.3e-30 138.7 407 32.7
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 2.9e-30 137.5 364 32.1
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 3.8e-30 137.1 383 32.1
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 1.9e-29 134.8 189 47.6
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 2.4e-29 134.4 338 33.1
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 3.2e-29 134.0 358 29.9
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 5.4e-29 133.3 280 34.6
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 7.1e-29 132.9 291 35.4
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 9.2e-29 132.5 394 32.5
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.2e-28 132.1 346 34.1
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 2.1e-28 131.3 403 31.3
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 3.5e-28 130.6 378 31.7
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 6.0e-28 129.8 385 29.9
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 7.8e-28 129.4 381 31.0
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 7.8e-28 129.4 383 31.9
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 1.3e-27 128.6 370 30.8
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.7e-27 128.3 384 30.7
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 3.0e-27 127.5 377 30.2
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 5.1e-27 126.7 381 28.3
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.1e-26 125.6 115 56.5
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 2.5e-26 124.4 369 29.3
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 5.6e-26 123.2 378 31.0
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 9.6e-26 122.5 377 31.6
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 2.1e-25 121.3 384 28.1
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 1.1e-24 119.0 279 34.4
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.4e-24 117.9 370 30.0
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 4.0e-24 117.1 382 29.6
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 7.6e-23 112.8 341 29.6
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 9.9e-23 112.5 341 29.3
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 2.9e-22 110.9 376 29.8
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 4.9e-22 110.2 367 28.6
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.9e-21 108.2 383 29.0
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 7.1e-21 106.3 377 27.9
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 6.0e-20 103.2 371 27.2
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.3e-19 102.1 373 26.5
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 8.7e-19 99.4 329 28.9
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 2.8e-17 94.4 374 25.9
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.4e-16 92.0 374 25.7
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.0e-16 90.5 393 26.2
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.5e-15 88.6 374 25.7
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.5e-15 88.6 374 25.7
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.5e-15 88.6 393 27.0
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 6.7e-11 73.2 162 38.3


User provided reference genes

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