Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_21990 Physcomitrium patens HOM05D003323 ORTHO05D003726 8.7e-113 410.2 193 100.0
Pp3c13_11160 Physcomitrium patens HOM05D003323 ORTHO05D003726 9.8e-16 87.8 169 34.9
Pp3c26_13000 Physcomitrium patens HOM05D003323 ORTHO05D003726 1.9e-14 83.6 169 32.0
Pp3c3_10250 Physcomitrium patens HOM05D003323 ORTHO05D003726 8.6e-12 74.7 103 38.8
AagrBONN_evm.TU.Sc2ySwM_117.2501 Anthoceros agrestis HOM05D003323 ORTHO05D003726 1.1e-11 74.3 112 38.4
SMO134G0176 Selaginella moellendorffii HOM05D003323 ORTHO05D003726 1.9e-11 73.6 161 34.8
BcaB01g03645 Brassica carinata HOM05D003323 ORTHO05D003726 9.5e-11 71.2 176 31.2
A03p21850 Brassica napus HOM05D003323 ORTHO05D003726 9.5e-11 71.2 176 31.2
C03p25920 Brassica napus HOM05D003323 ORTHO05D003726 9.5e-11 71.2 176 31.2
BolC3t14977H Brassica oleracea HOM05D003323 ORTHO05D003726 9.5e-11 71.2 176 31.2
BraA03t11421Z Brassica rapa HOM05D003323 ORTHO05D003726 9.5e-11 71.2 176 31.2
SEGI_18255 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 3.6e-10 69.3 106 35.8
Lsat_1_v5_gn_6_38161 Lactuca sativa HOM05D003323 ORTHO05D003726 6.2e-10 68.6 116 32.8
THA.LOC104805794 Tarenaya hassleriana HOM05D003323 ORTHO05D003726 6.2e-10 68.6 111 34.2
CARHR133820 Cardamine hirsuta HOM05D003323 ORTHO05D003726 8.1e-10 68.2 172 30.8
AT2G39050 Arabidopsis thaliana HOM05D003323 ORTHO05D003726 1.1e-09 67.8 172 30.2
SEGI_09676 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 1.1e-09 67.8 106 34.9
SEGI_27346 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 1.1e-09 67.8 176 30.1
ATR0048G048 Amborella trichopoda HOM05D003323 ORTHO05D003726 1.8e-09 67.0 170 28.8
Hma1.2p1_0044F.1_g026200 Hydrangea macrophylla HOM05D003323 ORTHO05D003726 2.3e-09 66.6 111 36.9
Aa31LG5G20560 Aethionema arabicum HOM05D003323 ORTHO05D003726 3.1e-09 66.2 175 29.7
SEGI_06304 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 3.1e-09 66.2 106 34.0
Cpa.g.sc51.81 Carica papaya HOM05D003323 ORTHO05D003726 4.0e-09 65.9 173 31.8
ECA233G2568 Erigeron canadensis HOM05D003323 ORTHO05D003726 4.0e-09 65.9 116 33.6
TWI59G0257 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 4.0e-09 65.9 116 34.5
Lsat_1_v5_gn_6_38201 Lactuca sativa HOM05D003323 ORTHO05D003726 5.2e-09 65.5 114 29.8
SalBow8G1550 Salvia bowleyana HOM05D003323 ORTHO05D003726 5.2e-09 65.5 174 29.3
CSS0044054 Camellia sinensis var. sinensis HOM05D003323 ORTHO05D003726 6.8e-09 65.1 172 29.7
Carub.0004s2111 Capsella rubella HOM05D003323 ORTHO05D003726 6.8e-09 65.1 111 35.1
Lalb_Chr24g0403091 Lupinus albus HOM05D003323 ORTHO05D003726 6.8e-09 65.1 169 30.8
SEGI_30613 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 6.8e-09 65.1 107 32.7
CsaV3_4G013410 Cucumis sativus L. HOM05D003323 ORTHO05D003726 8.9e-09 64.7 108 34.3
Sp4g21410 Schrenkiella parvula HOM05D003323 ORTHO05D003726 1.2e-08 64.3 172 29.7
Dinv14597 Davidia involucrata HOM05D003323 ORTHO05D003726 1.5e-08 63.9 170 30.0
TWI59G0976 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 1.5e-08 63.9 104 35.6
SEGI_20983 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 2.0e-08 63.5 116 35.3
SEGI_37521 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 2.0e-08 63.5 131 33.6
TWI59G0053 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 2.0e-08 63.5 105 33.3
Eucgr.A02073 Eucalyptus grandis HOM05D003323 ORTHO05D003726 2.6e-08 63.2 107 33.6
Thhalv10016926m.g Eutrema salsugineum HOM05D003323 ORTHO05D003726 2.6e-08 63.2 111 34.2
MELO3C008791.2 Cucumis melo HOM05D003323 ORTHO05D003726 4.4e-08 62.4 111 35.1
Mapoly0011s0183 Marchantia polymorpha HOM05D003323 ORTHO05D003726 4.4e-08 62.4 115 33.9
PSO339G1654 Papaver somniferum HOM05D003323 ORTHO05D003726 4.4e-08 62.4 108 34.3
SEGI_18397 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 4.4e-08 62.4 114 33.3
TWI32G0068 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 4.4e-08 62.4 171 28.1
HanXRQChr13g0397641 Helianthus annuus HOM05D003323 ORTHO05D003726 5.8e-08 62.0 117 32.5
Lj1g0017895 Lotus japonicus HOM05D003323 ORTHO05D003726 5.8e-08 62.0 111 34.2
MD14G1001100 Malus domestica HOM05D003323 ORTHO05D003726 5.8e-08 62.0 176 27.3
Oeu048439.1 Olea europaea HOM05D003323 ORTHO05D003726 5.8e-08 62.0 171 28.7
SEGI_11158 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 5.8e-08 62.0 178 29.8
Aqoxy2G00016 Aquilegia oxysepala HOM05D003323 ORTHO05D003726 7.6e-08 61.6 168 26.8
Haze_19396 Corylus avellana HOM05D003323 ORTHO05D003726 9.9e-08 61.2 169 29.0
HanXRQChr13g0397651 Helianthus annuus HOM05D003323 ORTHO05D003726 9.9e-08 61.2 117 32.5
Lj1A1139G46 Lonicera japonica HOM05D003323 ORTHO05D003726 9.9e-08 61.2 169 29.6
Rhsim01G0232200 Rhododendron simsii HOM05D003323 ORTHO05D003726 1.3e-07 60.8 169 28.4
PSO210G1588 Papaver somniferum HOM05D003323 ORTHO05D003726 1.7e-07 60.5 108 32.4
Actinidia22097 Actinidia chinensis HOM05D003323 ORTHO05D003726 2.9e-07 59.7 170 28.8
GSVIVG01033372001 Vitis vinifera HOM05D000010 ORTHO05D000151 2.9e-07 59.7 167 26.3
Zm00001eb111670 Zea mays HOM05D003323 ORTHO05D003726 2.9e-07 59.7 109 32.1
Actinidia30567 Actinidia chinensis HOM05D003323 ORTHO05D003726 3.7e-07 59.3 110 32.7
Cc00_g09510 Coffea canephora HOM05D003323 ORTHO05D003726 3.7e-07 59.3 167 28.7
Glyma.16G043100 Glycine max HOM05D003323 ORTHO05D003726 3.7e-07 59.3 107 32.7
SEGI_32661 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 3.7e-07 59.3 106 32.1
TAR626G0517 Trochodendron aralioides HOM05D003323 ORTHO05D003726 4.9e-07 58.9 169 27.8
AUR62013327 Chenopodium quinoa HOM05D003323 ORTHO05D003726 6.4e-07 58.5 177 30.5
Medtr7g085240 Medicago truncatula HOM05D003323 ORTHO05D003726 6.4e-07 58.5 169 27.8
Glyma.16G043000 Glycine max HOM05D003323 ORTHO05D003726 8.4e-07 58.2 108 33.3
Lsat_1_v5_gn_2_58781 Lactuca sativa HOM05D003323 ORTHO05D003726 8.4e-07 58.2 175 25.7
Sed0012422 Sechium edule HOM05D003323 ORTHO05D003726 8.4e-07 58.2 108 33.3
SGA_v2.0_scaffold374G50226 Striga asiatica HOM05D003323 ORTHO05D003726 8.4e-07 58.2 108 32.4
Zm00001eb015620 Zea mays HOM05D003323 ORTHO05D003726 8.4e-07 58.2 110 30.9
Migut.N00506 Erythranthe guttata HOM05D003323 ORTHO05D003726 1.1e-06 57.8 168 28.0
HanXRQChr14g0437961 Helianthus annuus HOM05D003323 ORTHO05D003726 1.1e-06 57.8 114 32.5
Prupe.7G001300 Prunus persica HOM05D003323 ORTHO05D003726 1.1e-06 57.8 174 25.3
Sabra19G0040200 Salix brachista HOM05D003323 ORTHO05D003726 1.1e-06 57.8 168 27.4
AUR62011161 Chenopodium quinoa HOM05D003323 ORTHO05D003726 1.4e-06 57.4 177 30.5
ECA238G3705 Erigeron canadensis HOM05D001256 ORTHO05D003726 1.4e-06 57.4 111 33.3
SEGI_25185 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 1.4e-06 57.4 108 31.5
AagrBONN_evm.TU.Sc2ySwM_368.2220 Anthoceros agrestis HOM05D003323 ORTHO05D003726 1.9e-06 57.0 169 24.9
COL.COLO4_05925 Corchorus olitorius HOM05D003323 ORTHO05D003726 1.9e-06 57.0 101 33.7
Glyma.19G109000 Glycine max HOM05D003323 ORTHO05D003726 1.9e-06 57.0 108 33.3
Gohir.A13G101900 Gossypium hirsutum HOM05D003323 ORTHO05D003726 1.9e-06 57.0 169 27.2
Os07g0684000 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 1.9e-06 57.0 109 31.2
Zm00001eb330890 Zea mays HOM05D003323 ORTHO05D003726 1.9e-06 57.0 110 33.6
Zm00001eb330900 Zea mays HOM05D003323 ORTHO05D003726 1.9e-06 57.0 110 33.6
Atru.chr2.1263 Acer truncatum HOM05D003323 ORTHO05D003726 2.4e-06 56.6 107 29.9
Os07g0683900 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 2.4e-06 56.6 108 33.3
Psat3g090320 Pisum sativum HOM05D003323 ORTHO05D003726 2.4e-06 56.6 108 31.5
Ca_08250_v3 Cicer arietinum L. HOM05D003323 ORTHO05D003726 3.2e-06 56.2 169 27.2
Ciclev10021104m.g Citrus clementina HOM05D003323 ORTHO05D003726 3.2e-06 56.2 110 29.1
Gorai.013G118100 Gossypium raimondii HOM05D003323 ORTHO05D003726 3.2e-06 56.2 169 26.6
Nn7g35780 Nelumbo nucifera HOM05D003323 ORTHO05D003726 3.2e-06 56.2 107 30.8
Os01g0104400 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 4.1e-06 55.8 109 33.9
Os07g0683600 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 4.1e-06 55.8 107 30.8
SEGI_33927 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 4.1e-06 55.8 127 33.1
arahy.Tifrunner.gnm1.ann1.1BJ025 Arachis hypogaea HOM05D003323 ORTHO05D003726 5.4e-06 55.5 106 34.0
Sabra19G0040300 Salix brachista HOM05D003323 ORTHO05D003726 5.4e-06 55.5 168 26.8
CDE09G0895 Ceratophyllum demersum HOM05D003323 ORTHO05D003726 7.1e-06 55.1 107 31.8
MD12G1000900 Malus domestica HOM05D003323 ORTHO05D003726 7.1e-06 55.1 175 25.1
Thecc.05G259200 Theobroma cacao HOM05D003323 ORTHO05D003726 7.1e-06 55.1 169 26.6
TWI34G1347 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 7.1e-06 55.1 109 31.2
CiPaw.09G000100 Carya illinoinensis HOM05D003323 ORTHO05D003726 9.2e-06 54.7 105 30.5
Gohir.1Z049450 Gossypium hirsutum HOM05D003323 ORTHO05D003726 9.2e-06 54.7 169 26.6
Gohir.1Z049550 Gossypium hirsutum HOM05D003323 ORTHO05D003726 9.2e-06 54.7 169 26.6
Lsat_1_v5_gn_6_38181 Lactuca sativa HOM05D003323 ORTHO05D003726 9.2e-06 54.7 117 28.2
SEGI_14009 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 9.2e-06 54.7 87 32.2
Sc18g0000450 Simmondsia chinensis HOM05D003323 ORTHO05D003726 9.2e-06 54.7 98 30.6
TWI34G1557 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 9.2e-06 54.7 109 32.1
TWI34G2035 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 9.2e-06 54.7 109 32.1
Zm00001eb126900 Zea mays HOM05D003323 ORTHO05D003726 9.2e-06 54.7 110 32.7


User provided reference genes

Program Settings