Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.1e-56 223.0 109 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.1e-35 151.8 103 65.0
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 8.0e-31 137.1 101 59.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 3.4e-29 131.7 97 56.7
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 4.4e-29 131.3 97 56.7
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 5.7e-29 131.0 97 58.8
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 5.7e-29 131.0 97 59.8
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 7.5e-29 130.6 101 55.4
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 7.5e-29 130.6 101 55.4
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.3e-28 129.8 101 56.4
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.7e-28 129.4 97 56.7
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.3e-28 127.5 97 54.6
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 8.3e-28 127.1 97 54.6
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.1e-27 126.7 97 55.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.1e-27 126.7 107 51.4
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.1e-27 126.7 97 54.6
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.1e-27 126.7 101 54.5
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 1.1e-27 126.7 97 53.6
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.1e-27 126.7 101 54.5
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.1e-27 126.7 97 54.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.4e-27 126.3 97 54.6
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.4e-27 126.3 97 54.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.4e-27 126.3 97 54.6
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.4e-27 126.3 97 54.6
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.8e-27 125.9 97 53.6
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.8e-27 125.9 101 53.5
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 1.8e-27 125.9 101 53.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.4e-27 125.6 97 54.6
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 2.4e-27 125.6 101 50.5
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.4e-27 125.6 97 53.6
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.4e-27 125.6 97 56.7
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.1e-27 125.2 97 54.6
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 3.1e-27 125.2 97 54.6
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 3.1e-27 125.2 97 53.6
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 3.1e-27 125.2 97 52.6
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 3.1e-27 125.2 107 54.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.1e-27 125.2 101 52.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.1e-27 125.2 101 51.5
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 3.1e-27 125.2 97 53.6
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 3.1e-27 125.2 101 53.5
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 4.1e-27 124.8 97 55.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.1e-27 124.8 97 54.6
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 4.1e-27 124.8 97 53.6
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 4.1e-27 124.8 97 53.6
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 4.1e-27 124.8 97 52.6
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.4e-27 124.4 101 52.5
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 5.4e-27 124.4 97 52.6
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.4e-27 124.4 97 52.6
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 5.4e-27 124.4 97 54.6
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 7.0e-27 124.0 101 50.5
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 52.6
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 56.7
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 54.6
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 51.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 51.5
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 7.0e-27 124.0 97 51.5
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 9.1e-27 123.6 101 52.5
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 9.1e-27 123.6 97 54.6
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 9.1e-27 123.6 97 55.7
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 51.5
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 51.5
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 51.5
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.6e-26 122.9 101 52.5
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.6e-26 122.9 101 51.5
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 53.6
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.6e-26 122.9 101 52.5
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 55.7
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.6e-26 122.9 97 53.6
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-26 122.5 97 51.5
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.0e-26 122.5 97 51.5
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.7e-26 122.1 101 51.5
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.7e-26 122.1 107 50.5
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 3.5e-26 121.7 97 52.6
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 3.5e-26 121.7 103 49.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 3.5e-26 121.7 107 50.5
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 4.5e-26 121.3 100 56.0
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 5.9e-26 120.9 101 51.5
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 7.7e-26 120.6 97 50.5
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 7.7e-26 120.6 97 53.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 7.7e-26 120.6 101 50.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.0e-25 120.2 101 49.5
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.3e-25 119.8 101 50.5
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.3e-25 119.8 97 50.5
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.3e-25 119.8 97 51.5
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 2.3e-25 119.0 101 50.5
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 2.3e-25 119.0 101 50.5
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.3e-25 119.0 101 50.5
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.3e-25 119.0 97 52.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.3e-25 119.0 97 51.5
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.9e-25 118.6 91 51.6
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.9e-25 118.6 101 51.5
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.9e-25 118.6 97 49.5
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.8e-25 118.2 101 49.5
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 6.5e-25 117.5 97 52.6
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 6.5e-25 117.5 97 53.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 8.6e-25 117.1 97 52.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 8.6e-25 117.1 103 48.5
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 8.6e-25 117.1 95 52.6
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 1.5e-24 116.3 101 48.5
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.9e-24 115.9 101 48.5
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.9e-24 115.9 97 50.5
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.9e-24 115.9 97 50.5
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 2.5e-24 115.5 101 50.5
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 4.2e-24 114.8 105 48.6
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 4.2e-24 114.8 101 49.5
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 5.5e-24 114.4 101 49.5
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.8e-23 112.1 97 51.5
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.6e-23 111.7 101 47.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 8.0e-23 110.5 101 47.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.0e-22 110.2 101 45.5
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.4e-22 109.8 87 52.9
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 2.0e-21 105.9 101 44.6
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.6e-21 105.5 78 57.7
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 5.7e-21 104.4 78 56.4
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 7.5e-21 104.0 98 46.9
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.3e-20 100.9 78 53.8
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 6.3e-20 100.9 73 57.5
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.4e-19 99.8 84 50.0
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.1e-19 98.2 149 34.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 5.9e-18 94.4 140 35.7
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.0e-17 91.3 101 42.6
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 3.3e-16 88.6 66 59.1
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.4e-13 78.6 61 59.0
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 4.4e-13 78.2 61 54.1
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 2.2e-12 75.9 61 50.8
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.9e-12 74.7 61 55.7
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 6.4e-12 74.3 98 38.8
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.7e-09 66.2 96 35.4
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.2e-07 60.1 57 45.6
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 2.3e-06 55.8 41 53.7
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 6.8e-06 54.3 49 44.9


User provided reference genes

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