Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_19930 Physcomitrium patens HOM05D001648 ORTHO05D001657 1.6e-97 359.4 181 100.0
Mapoly0020s0056 Marchantia polymorpha HOM05D001648 ORTHO05D001657 1.2e-12 77.4 106 40.6
SEGI_37409 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 1.6e-12 77.0 106 38.7
ATR0693G172 Amborella trichopoda HOM05D001648 ORTHO05D001657 4.7e-12 75.5 113 36.3
FAN12G4038 Fragaria x ananassa HOM05D001648 ORTHO05D001657 4.7e-12 75.5 112 35.7
Pp3c17_9810 Physcomitrium patens HOM05D001648 ORTHO05D001657 8.1e-12 74.7 102 41.2
Eucgr.H04043 Eucalyptus grandis HOM05D001648 ORTHO05D001657 1.1e-11 74.3 104 36.5
Sed0017670 Sechium edule HOM05D001648 ORTHO05D001657 1.1e-11 74.3 115 36.5
SMO197G0103 Selaginella moellendorffii HOM05D001648 ORTHO05D001657 1.4e-11 73.9 105 40.0
MELO3C014490.2 Cucumis melo HOM05D001648 ORTHO05D001657 1.8e-11 73.6 110 39.1
PSO170G2428 Papaver somniferum HOM05D001648 ORTHO05D001657 1.8e-11 73.6 170 31.2
Prupe.4G006300 Prunus persica HOM05D001648 ORTHO05D001657 1.8e-11 73.6 104 40.4
SHI00142 Sapria himalayana HOM05D001648 ORTHO05D001657 1.8e-11 73.6 105 38.1
Sed0017525 Sechium edule HOM05D001648 ORTHO05D001657 1.8e-11 73.6 108 35.2
Lsat_1_v5_gn_1_41040 Lactuca sativa HOM05D001648 ORTHO05D001657 2.4e-11 73.2 112 36.6
CsaV3_6G048340 Cucumis sativus L. HOM05D001648 ORTHO05D001657 3.1e-11 72.8 108 39.8
Dinv15171 Davidia involucrata HOM05D001648 ORTHO05D001657 3.1e-11 72.8 108 35.2
Lalb_Chr20g0120871 Lupinus albus HOM05D001648 ORTHO05D001657 3.1e-11 72.8 122 32.8
Solyc11g012645.1 Solanum lycopersicum HOM05D001648 ORTHO05D001657 3.1e-11 72.8 105 36.2
Sopen11g007380 Solanum pennellii HOM05D001648 ORTHO05D001657 3.1e-11 72.8 105 36.2
DCAR_030847 Daucus carota HOM05D001648 ORTHO05D001657 4.0e-11 72.4 104 36.5
Peaxi162Scf00008g10013 Petunia axillaris HOM05D001648 ORTHO05D001657 4.0e-11 72.4 105 38.1
Pp3c22_22420 Physcomitrium patens HOM05D001648 ORTHO05D001657 4.0e-11 72.4 117 42.7
TPR.G27255 Trifolium pratense HOM05D001648 ORTHO05D001657 4.0e-11 72.4 113 32.7
arahy.Tifrunner.gnm1.ann1.8D5WLD Arachis hypogaea HOM05D001648 ORTHO05D001657 5.2e-11 72.0 108 38.0
arahy.Tifrunner.gnm1.ann1.V2EIWI Arachis hypogaea HOM05D001648 ORTHO05D001657 5.2e-11 72.0 108 38.0
FvH4_4g19680 Fragaria vesca HOM05D001648 ORTHO05D001657 5.2e-11 72.0 131 32.8
MD00G1057600 Malus domestica HOM05D001648 ORTHO05D001657 5.2e-11 72.0 104 39.4
Pp3c15_2600 Physcomitrium patens HOM05D001648 ORTHO05D001657 5.2e-11 72.0 114 39.5
PGR004G1939 Punica granatum HOM05D001648 ORTHO05D001657 5.2e-11 72.0 105 38.1
SHI14351 Sapria himalayana HOM05D001648 ORTHO05D001657 5.2e-11 72.0 108 37.0
CiPaw.01G138800 Carya illinoinensis HOM05D001648 ORTHO05D001657 6.8e-11 71.6 105 35.2
RcHm_v2.0_Chr5g0000721 Rosa chinensis HOM05D001648 ORTHO05D001657 6.8e-11 71.6 104 36.5
TAR362G1115 Trochodendron aralioides HOM05D001648 ORTHO05D001657 6.8e-11 71.6 105 37.1
GSVIVG01034993001 Vitis vinifera HOM05D001648 ORTHO05D001657 6.8e-11 71.6 105 37.1
Ciclev10006815m.g Citrus clementina HOM05D001648 ORTHO05D001657 8.9e-11 71.2 114 32.5
FvH4_3g00520 Fragaria vesca HOM05D001648 ORTHO05D001657 8.9e-11 71.2 104 36.5
CSS0005046 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 1.2e-10 70.9 126 33.3
ClCG01G021330 Citrullus lanatus HOM05D001648 ORTHO05D001657 1.2e-10 70.9 100 40.0
Haze_01296 Corylus avellana HOM05D001648 ORTHO05D001657 1.2e-10 70.9 119 33.6
MELO3C007447.2 Cucumis melo HOM05D001648 ORTHO05D001657 1.2e-10 70.9 86 43.0
FAN25G2232 Fragaria x ananassa HOM05D001648 ORTHO05D001657 1.2e-10 70.9 104 35.6
Peaxi162Scf00120g00014 Petunia axillaris HOM05D001648 ORTHO05D001657 1.2e-10 70.9 146 33.6
Phvul.009G162500 Phaseolus vulgaris HOM05D001648 ORTHO05D001657 1.2e-10 70.9 106 38.7
Thecc.06G238000 Theobroma cacao HOM05D001648 ORTHO05D001657 1.2e-10 70.9 104 36.5
TAR629G1950 Trochodendron aralioides HOM05D001648 ORTHO05D001657 1.2e-10 70.9 105 41.0
VMungo1309G1403 Vigna mungo HOM05D001648 ORTHO05D001657 1.2e-10 70.9 106 38.7
Cc03_g00850 Coffea canephora HOM05D001648 ORTHO05D001657 1.5e-10 70.5 105 38.1
COL.COLO4_34617 Corchorus olitorius HOM05D001648 ORTHO05D001657 1.5e-10 70.5 100 37.0
Glyma.06G167300 Glycine max HOM05D001648 ORTHO05D001657 1.5e-10 70.5 106 38.7
PSO357G0566 Papaver somniferum HOM05D001648 ORTHO05D001657 1.5e-10 70.5 118 35.6
PGR102G0903 Punica granatum HOM05D001648 ORTHO05D001657 1.5e-10 70.5 114 40.4
Glyma.04G198200 Glycine max HOM05D001648 ORTHO05D001657 2.0e-10 70.1 106 37.7
Lj4g0004667 Lotus japonicus HOM05D001648 ORTHO05D001657 2.0e-10 70.1 110 31.8
Lj4g0026101 Lotus japonicus HOM05D001648 ORTHO05D001657 2.0e-10 70.1 113 36.3
Medtr3g098960 Medicago truncatula HOM05D001648 ORTHO05D001657 2.0e-10 70.1 106 37.7
Peaxi162Scf00063g00612 Petunia axillaris HOM05D001648 ORTHO05D001657 2.0e-10 70.1 99 38.4
PGSC0003DMG400013361 Solanum tuberosum HOM05D001648 ORTHO05D001657 2.0e-10 70.1 105 35.2
Aa31LG7G10760 Aethionema arabicum HOM05D001648 ORTHO05D001657 2.6e-10 69.7 109 37.6
arahy.Tifrunner.gnm1.ann1.8Q9Y6K Arachis hypogaea HOM05D001648 ORTHO05D001657 2.6e-10 69.7 124 31.5
Glyma.15G140600 Glycine max HOM05D001648 ORTHO05D001657 2.6e-10 69.7 100 34.0
Glyma.15G184800 Glycine max HOM05D001648 ORTHO05D001657 2.6e-10 69.7 100 34.0
Lj1g0019506 Lotus japonicus HOM05D001648 ORTHO05D001657 2.6e-10 69.7 102 39.2
Psat5g052920 Pisum sativum HOM05D001648 ORTHO05D001657 2.6e-10 69.7 106 37.7
Actinidia25551 Actinidia chinensis HOM05D001648 ORTHO05D001657 3.4e-10 69.3 125 37.6
Aqoxy2G02724 Aquilegia oxysepala HOM05D001648 ORTHO05D001657 3.4e-10 69.3 100 38.0
Thhalv10027160m.g Eutrema salsugineum HOM05D001648 ORTHO05D001657 3.4e-10 69.3 100 38.0
Peaxi162Scf00063g00411 Petunia axillaris HOM05D001648 ORTHO05D001657 3.4e-10 69.3 79 41.8
Peaxi162Scf00063g00412 Petunia axillaris HOM05D001648 ORTHO05D001657 3.4e-10 69.3 79 41.8
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.4e-10 68.9 108 37.0
Ah.02g114760 Amaranthus hybridus HOM05D001648 ORTHO05D001657 4.4e-10 68.9 105 38.1
EL10Ac5g11357 Beta vulgaris HOM05D001648 ORTHO05D001657 4.4e-10 68.9 109 37.6
Pp3c19_9830 Physcomitrium patens HOM05D001648 ORTHO05D001657 4.4e-10 68.9 123 39.8
AL1G46840 Arabidopsis lyrata HOM05D001648 ORTHO05D001657 5.8e-10 68.6 109 36.7
CiPaw.09G107100 Carya illinoinensis HOM05D001648 ORTHO05D001657 5.8e-10 68.6 122 35.2
PSO017G0251 Papaver somniferum HOM05D001648 ORTHO05D001657 5.8e-10 68.6 100 37.0
PSO478G0651 Papaver somniferum HOM05D001648 ORTHO05D001657 5.8e-10 68.6 100 37.0
TPR.G35265 Trifolium pratense HOM05D001648 ORTHO05D001657 5.8e-10 68.6 106 36.8
GSVIVG01003483001 Vitis vinifera HOM05D001648 ORTHO05D001657 5.8e-10 68.6 109 37.6
AUR62025947 Chenopodium quinoa HOM05D001648 ORTHO05D001657 7.6e-10 68.2 109 34.9
Nitab4.5_0001198g0360 Nicotiana tabacum HOM05D001648 ORTHO05D001657 7.6e-10 68.2 101 39.6
SMO116G0188 Selaginella moellendorffii HOM05D001648 ORTHO05D001657 7.6e-10 68.2 99 34.3
AT1G32583 Arabidopsis thaliana HOM05D001648 ORTHO05D001657 9.9e-10 67.8 132 33.3
Duzib151G0410 Durio zibethinus HOM05D001648 ORTHO05D001657 9.9e-10 67.8 132 32.6
Nitab4.5_0000143g0570 Nicotiana tabacum HOM05D001648 ORTHO05D001657 9.9e-10 67.8 105 37.1
Potri.006G017600 Populus trichocarpa HOM05D001648 ORTHO05D001657 9.9e-10 67.8 108 36.1
RcHm_v2.0_Chr7g0189441 Rosa chinensis HOM05D001648 ORTHO05D001657 9.9e-10 67.8 100 39.0
Cc00_g35920 Coffea canephora HOM05D001648 ORTHO05D001657 1.3e-09 67.4 82 40.2
Cc09_g00540 Coffea canephora HOM05D001648 ORTHO05D001657 1.3e-09 67.4 82 40.2
Duzib192G0395 Durio zibethinus HOM05D001648 ORTHO05D001657 1.3e-09 67.4 100 38.0
Lj6g0022876 Lotus japonicus HOM05D001648 ORTHO05D001657 1.3e-09 67.4 122 31.1
Duzib084G0483 Durio zibethinus HOM05D001648 ORTHO05D001657 1.7e-09 67.0 100 39.0
Lsat_1_v5_gn_7_14040 Lactuca sativa HOM05D001648 ORTHO05D001657 1.7e-09 67.0 105 36.2
Lj4g0020793 Lotus japonicus HOM05D001648 ORTHO05D001657 1.7e-09 67.0 110 32.7
PSO017G6248 Papaver somniferum HOM05D001648 ORTHO05D001657 1.7e-09 67.0 100 37.0
Peaxi162Scf00043g00032 Petunia axillaris HOM05D001648 ORTHO05D001657 1.7e-09 67.0 105 37.1
Sabra06G0012600 Salix brachista HOM05D001648 ORTHO05D001657 1.7e-09 67.0 108 35.2
vmacro19143 Vaccinium macrocarpon HOM05D001648 ORTHO05D001657 1.7e-09 67.0 147 34.7
AUR62029562 Chenopodium quinoa HOM05D001648 ORTHO05D001657 2.2e-09 66.6 103 34.0
ECA246G5144 Erigeron canadensis HOM05D001648 ORTHO05D001657 2.2e-09 66.6 167 29.3
Psat1g161320 Pisum sativum HOM05D001648 ORTHO05D001657 2.2e-09 66.6 112 32.1
Ca_16063_v3 Cicer arietinum L. HOM05D001648 ORTHO05D001657 2.9e-09 66.2 106 37.7
Ca_16066_v3 Cicer arietinum L. HOM05D001648 ORTHO05D001657 2.9e-09 66.2 106 37.7
Duzib212G0345 Durio zibethinus HOM05D001648 ORTHO05D001657 2.9e-09 66.2 99 36.4
PSO478G1048 Papaver somniferum HOM05D001648 ORTHO05D001657 2.9e-09 66.2 100 37.0
Nitab4.5_0003383g0020 Nicotiana tabacum HOM05D001648 ORTHO05D001657 3.8e-09 65.9 100 38.0
QL06p012252 Quercus lobata HOM05D001648 ORTHO05D001657 3.8e-09 65.9 167 28.7
PGSC0003DMG400031737 Solanum tuberosum HOM05D001648 ORTHO05D001657 3.8e-09 65.9 144 32.6
Atru.chr6.1871 Acer truncatum HOM05D001648 ORTHO05D001657 4.9e-09 65.5 100 38.0
Actinidia18332 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.9e-09 65.5 100 39.0
Actinidia36825 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.9e-09 65.5 141 32.6
Aqoxy3G02894 Aquilegia oxysepala HOM05D001648 ORTHO05D001657 4.9e-09 65.5 116 32.8
CARHR032030 Cardamine hirsuta HOM05D001648 ORTHO05D001657 4.9e-09 65.5 133 33.8
FAN11G3183 Fragaria x ananassa HOM05D001648 ORTHO05D001657 4.9e-09 65.5 105 37.1
FAN16G2923 Fragaria x ananassa HOM05D001648 ORTHO05D001657 4.9e-09 65.5 105 37.1
Oeu002773.1 Olea europaea HOM05D001648 ORTHO05D001657 4.9e-09 65.5 100 36.0
Rhsim08G0193300 Rhododendron simsii HOM05D001648 ORTHO05D001657 4.9e-09 65.5 145 32.4
TAR374G0776 Trochodendron aralioides HOM05D001648 ORTHO05D001657 4.9e-09 65.5 100 36.0
VMungo0540G0987 Vigna mungo HOM05D001648 ORTHO05D001657 4.9e-09 65.5 109 31.2
Actinidia11901 Actinidia chinensis HOM05D001648 ORTHO05D001657 6.4e-09 65.1 109 34.9
Actinidia26838 Actinidia chinensis HOM05D001648 ORTHO05D001657 6.4e-09 65.1 109 33.9
CSS0000298 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 6.4e-09 65.1 123 32.5
FAN21G3275 Fragaria x ananassa HOM05D001648 ORTHO05D001657 6.4e-09 65.1 105 37.1
Glyma.08G010200 Glycine max HOM05D001648 ORTHO05D001657 6.4e-09 65.1 104 37.5
Medtr2g034150 Medicago truncatula HOM05D001648 ORTHO05D001657 6.4e-09 65.1 100 35.0
Nn4g25567 Nelumbo nucifera HOM05D001648 ORTHO05D001657 6.4e-09 65.1 134 32.8
Solyc03g097530.3 Solanum lycopersicum HOM05D001648 ORTHO05D001657 6.4e-09 65.1 144 34.0
Sopen03g028290 Solanum pennellii HOM05D001648 ORTHO05D001657 6.4e-09 65.1 144 34.0
Lj1P1245T25 Lonicera japonica HOM05D001648 ORTHO05D001657 8.4e-09 64.7 86 38.4
Peaxi162Scf00063g00413 Petunia axillaris HOM05D001648 ORTHO05D001657 8.4e-09 64.7 123 32.5
Dinv23183 Davidia involucrata HOM05D001648 ORTHO05D001657 1.1e-08 64.3 170 29.4
ECA232G3473 Erigeron canadensis HOM05D001648 ORTHO05D001657 1.1e-08 64.3 100 38.0
Lalb_Chr23g0273631 Lupinus albus HOM05D001648 ORTHO05D001657 1.1e-08 64.3 106 35.8
TWI14G1223 Tripterygium wilfordii HOM05D001648 ORTHO05D001657 1.1e-08 64.3 104 37.5
Dinv11202 Davidia involucrata HOM05D001648 ORTHO05D001657 1.4e-08 63.9 139 31.7
HanXRQChr09g0273521 Helianthus annuus HOM05D001648 ORTHO05D001657 1.4e-08 63.9 100 38.0
Mapoly0020s0057 Marchantia polymorpha HOM05D001648 ORTHO05D001657 1.4e-08 63.9 114 33.3
Medtr8g096400 Medicago truncatula HOM05D001648 ORTHO05D001657 1.4e-08 63.9 84 42.9
Nitab4.5_0001332g0060 Nicotiana tabacum HOM05D001648 ORTHO05D001657 1.4e-08 63.9 100 37.0
Carub.0001s3098 Capsella rubella HOM05D001648 ORTHO05D001657 1.9e-08 63.5 129 33.3
FvH4_3g11000 Fragaria vesca HOM05D001648 ORTHO05D001657 1.9e-08 63.5 129 33.3
HanXRQChr05g0155601 Helianthus annuus HOM05D001648 ORTHO05D001657 1.9e-08 63.5 85 43.5
TPR.G22738 Trifolium pratense HOM05D001648 ORTHO05D001657 1.9e-08 63.5 120 31.7
TWI23G0166 Tripterygium wilfordii HOM05D001648 ORTHO05D001657 1.9e-08 63.5 104 37.5
Manes.03G204733 Manihot esculenta HOM05D001648 ORTHO05D001657 2.4e-08 63.2 126 32.5
Potri.015G101000 Populus trichocarpa HOM05D001648 ORTHO05D001657 2.4e-08 63.2 100 35.0
Sabra15G0121400 Salix brachista HOM05D001648 ORTHO05D001657 2.4e-08 63.2 169 30.2
Gohir.A06G155700 Gossypium hirsutum HOM05D001648 ORTHO05D001657 3.2e-08 62.8 166 30.1
Gorai.010G189100 Gossypium raimondii HOM05D001648 ORTHO05D001657 3.2e-08 62.8 166 30.7
MSTRG.16043 Avicennia marina HOM05D001648 ORTHO05D001657 4.2e-08 62.4 108 36.1
CANSAT56G4242 Cannabis sativa HOM05D001648 ORTHO05D001657 4.2e-08 62.4 144 31.2
FAN07G0572 Fragaria x ananassa HOM05D001648 ORTHO05D001657 4.2e-08 62.4 131 31.3
Phvul.003G085600 Phaseolus vulgaris HOM05D001648 ORTHO05D001657 4.2e-08 62.4 100 35.0
CANSAT80G2897 Cannabis sativa HOM05D001648 ORTHO05D001657 5.4e-08 62.0 180 31.1
MELO3C022935.2 Cucumis melo HOM05D001648 ORTHO05D001657 5.4e-08 62.0 82 40.2
Gohir.D06G162100 Gossypium hirsutum HOM05D001648 ORTHO05D001657 7.1e-08 61.6 166 30.7
SEGI_22146 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 7.1e-08 61.6 128 30.5
Sc05g0009770 Simmondsia chinensis HOM05D001648 ORTHO05D001657 7.1e-08 61.6 104 36.5
QL01p017545 Quercus lobata HOM05D001648 ORTHO05D001657 9.3e-08 61.2 82 41.5
SEGI_08703 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 1.2e-07 60.8 164 28.7
Rhsim12G0177800 Rhododendron simsii HOM05D001648 ORTHO05D001657 1.6e-07 60.5 173 31.2
Migut.K00279 Erythranthe guttata HOM05D001648 ORTHO05D001657 2.1e-07 60.1 98 35.7
Migut.K00283 Erythranthe guttata HOM05D001648 ORTHO05D001657 2.1e-07 60.1 118 36.4
Mapoly0030s0109 Marchantia polymorpha HOM05D001648 ORTHO05D001657 2.1e-07 60.1 104 30.8
Zm00001eb408950 Zea mays HOM05D001648 ORTHO05D001657 2.7e-07 59.7 117 34.2
Solyc11g005845.1 Solanum lycopersicum HOM05D001648 ORTHO05D001657 3.5e-07 59.3 116 31.0
Actinidia02293 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.6e-07 58.9 119 31.1
CARHR005380 Cardamine hirsuta HOM05D009409 ORTHO05D010962 1.3e-06 57.4 102 28.4
BcaB03g13418 Brassica carinata HOM05D009409 ORTHO05D010962 1.7e-06 57.0 102 30.4
SEGI_06802 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 2.3e-06 56.6 84 33.3
AUR62012834 Chenopodium quinoa HOM05D001648 ORTHO05D001657 3.0e-06 56.2 70 38.6
AagrBONN_evm.TU.Sc2ySwM_344.3222 Anthoceros agrestis HOM05D001648 ORTHO05D001657 3.9e-06 55.8 96 39.6
AT1G05835 Arabidopsis thaliana HOM05D009409 ORTHO05D010962 6.6e-06 55.1 102 29.4
Thhalv10009110m.g Eutrema salsugineum HOM05D009409 ORTHO05D010962 6.6e-06 55.1 102 29.4
HanXRQChr08g0236511 Helianthus annuus HOM05D001648 ORTHO05D001657 6.6e-06 55.1 75 38.7
Sp1g04650 Schrenkiella parvula HOM05D009409 ORTHO05D010962 6.6e-06 55.1 102 29.4
AL1G15770 Arabidopsis lyrata HOM05D009409 ORTHO05D010962 8.7e-06 54.7 102 29.4


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