Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 4.5e-141 504.6 256 100.0
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 9.2e-78 294.3 234 71.4
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 5.0e-76 288.5 200 67.5
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 3.5e-69 265.8 205 62.9
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 2.3e-68 263.1 206 62.1
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 5.1e-68 261.9 169 70.4
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.5e-67 260.4 182 65.9
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 2.5e-67 259.6 173 68.2
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 4.3e-67 258.8 171 67.8
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 7.3e-67 258.1 184 63.0
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.2e-66 257.3 182 63.7
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.2e-66 257.3 190 64.2
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 1.2e-66 257.3 168 67.3
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.6e-66 256.9 184 62.5
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 2.1e-66 256.5 190 63.7
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 2.1e-66 256.5 168 67.3
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 3.6e-66 255.8 162 69.8
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 3.6e-66 255.8 168 69.6
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 3.6e-66 255.8 160 71.2
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 6.2e-66 255.0 181 64.6
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.1e-65 254.2 179 65.4
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.4e-65 253.8 164 68.3
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.3e-65 253.1 189 64.0
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 2.3e-65 253.1 158 70.3
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 2.3e-65 253.1 157 72.6
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 3.1e-65 252.7 188 63.3
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 3.1e-65 252.7 204 58.8
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 4.0e-65 252.3 157 72.6
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 6.8e-65 251.5 164 67.7
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 6.8e-65 251.5 181 64.6
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 8.9e-65 251.1 158 70.9
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 8.9e-65 251.1 163 68.1
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 8.9e-65 251.1 158 70.3
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.2e-64 250.8 175 66.3
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.2e-64 250.8 171 66.7
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.5e-64 250.4 157 72.0
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.0e-64 250.0 164 67.7
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 2.0e-64 250.0 164 67.7
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 2.6e-64 249.6 158 70.3
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.6e-64 249.6 158 70.3
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 2.6e-64 249.6 184 62.0
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 2.6e-64 249.6 164 66.5
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 3.4e-64 249.2 228 57.0
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.4e-64 249.2 165 68.5
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 4.4e-64 248.8 157 71.3
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 7.5e-64 248.1 194 59.3
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 9.9e-64 247.7 168 67.3
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 9.9e-64 247.7 176 64.8
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.3e-63 247.3 168 66.7
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.3e-63 247.3 164 66.5
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 1.3e-63 247.3 162 68.5
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.2e-63 246.5 163 68.1
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 2.2e-63 246.5 174 64.4
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 2.9e-63 246.1 179 63.1
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 3.7e-63 245.7 172 65.7
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 3.7e-63 245.7 215 57.7
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 3.7e-63 245.7 215 57.7
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 4.9e-63 245.4 236 53.0
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 4.9e-63 245.4 157 70.7
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 6.4e-63 245.0 215 56.3
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 6.4e-63 245.0 169 65.7
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.4e-63 245.0 169 65.7
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.4e-63 245.0 169 65.7
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 6.4e-63 245.0 157 70.7
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 8.3e-63 244.6 172 65.7
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.1e-62 244.2 172 65.7
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.1e-62 244.2 214 55.6
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.4e-62 243.8 157 70.1
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.4e-62 243.8 193 58.0
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 2.4e-62 243.0 198 61.1
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 4.1e-62 242.3 170 64.7
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 4.1e-62 242.3 158 67.7
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 5.4e-62 241.9 162 67.9
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 9.2e-62 241.1 163 66.9
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.2e-61 240.7 172 65.1
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 1.2e-61 240.7 161 67.1
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 1.2e-61 240.7 172 65.7
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.1e-61 240.0 224 55.4
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 2.1e-61 240.0 155 69.0
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 4.6e-61 238.8 171 63.2
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 6.0e-61 238.4 179 63.1
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 6.0e-61 238.4 179 63.1
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 1.0e-60 237.7 172 64.5
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.0e-60 236.1 172 64.5
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.0e-60 236.1 172 64.5
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.0e-60 236.1 172 64.5
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 3.9e-60 235.7 163 65.0
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 3.9e-60 235.7 192 57.8
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 6.6e-60 235.0 161 65.8
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.1e-59 234.2 143 74.1
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 2.5e-59 233.0 169 65.7
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 8.9e-57 224.6 142 71.8
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.5e-56 223.8 197 57.9
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 2.0e-56 223.4 184 60.9
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 3.4e-56 222.6 223 52.9
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 2.2e-55 219.9 188 58.5
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 3.5e-53 212.6 160 63.8
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 5.8e-48 195.3 129 67.4
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 7.1e-46 188.3 125 67.2
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 7.8e-45 184.9 116 70.7
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.9e-43 180.3 106 76.4
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.8e-41 173.7 140 58.6
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 5.4e-38 162.2 147 54.4
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.3e-36 157.5 169 47.9
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 3.3e-35 152.9 174 45.4
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 7.1e-30 135.2 163 43.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 4.6e-21 105.9 86 57.0
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.7e-15 87.4 99 47.5
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.0e-12 76.6 42 78.6
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.9e-12 76.3 48 64.6


User provided reference genes

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