Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_14150 Physcomitrium patens HOM05D005723 ORTHO05D005968 2.3e-162 575.5 285 100.0
Pp3c12_9930 Physcomitrium patens HOM05D005723 ORTHO05D005968 9.9e-57 224.6 253 51.0
AagrBONN_evm.TU.Sc2ySwM_117.3227 Anthoceros agrestis HOM05D005723 ORTHO05D005968 5.0e-40 169.1 126 63.5
Mapoly0013s0082 Marchantia polymorpha HOM05D005723 ORTHO05D005968 1.2e-38 164.5 135 58.5
SMO358G0738 Selaginella moellendorffii HOM05D005723 ORTHO05D005968 2.5e-36 156.8 158 53.2
Manes.08G043200 Manihot esculenta HOM05D005723 ORTHO05D005968 1.3e-35 154.5 181 50.8
Potri.006G192800 Populus trichocarpa HOM05D005723 ORTHO05D005968 1.7e-35 154.1 175 49.7
Potri.016G045300 Populus trichocarpa HOM05D005723 ORTHO05D005968 1.8e-34 150.6 179 48.0
Sabra06G0148000 Salix brachista HOM05D005723 ORTHO05D005968 3.1e-34 149.8 175 48.0
CsaV3_3G038770 Cucumis sativus L. HOM05D005723 ORTHO05D005968 4.1e-34 149.4 189 47.6
TWI53G1132 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 4.1e-34 149.4 186 48.4
ATR0807G138 Amborella trichopoda HOM05D005723 ORTHO05D005968 5.3e-34 149.1 177 46.9
HPP92_009080 Vanilla planifolia HOM05D005723 ORTHO05D005968 9.1e-34 148.3 112 63.4
Zm00001eb104410 Zea mays HOM05D005723 ORTHO05D005968 9.1e-34 148.3 158 51.3
MELO3C009621.2 Cucumis melo HOM05D005723 ORTHO05D005968 1.2e-33 147.9 191 47.6
Cfa020161 Carpinus fangiana HOM05D005723 ORTHO05D005968 2.0e-33 147.1 127 60.6
Sc13g0002300 Simmondsia chinensis HOM05D005723 ORTHO05D005968 2.0e-33 147.1 179 46.9
BolC3t15179H Brassica oleracea HOM05D005723 ORTHO05D005968 2.6e-33 146.7 225 43.1
Zm00001eb320790 Zea mays HOM05D005723 ORTHO05D005968 2.6e-33 146.7 158 51.3
Nitab4.5_0000324g0030 Nicotiana tabacum HOM05D005723 ORTHO05D005968 3.4e-33 146.4 158 50.0
Rhsim04G0096600 Rhododendron simsii HOM05D005723 ORTHO05D005968 3.4e-33 146.4 181 46.4
A03p23560 Brassica napus HOM05D005723 ORTHO05D005968 4.5e-33 146.0 208 43.3
PGR142G4063 Punica granatum HOM05D005723 ORTHO05D005968 4.5e-33 146.0 126 59.5
SGA_v2.0_scaffold274G46488 Striga asiatica HOM05D005723 ORTHO05D005968 4.5e-33 146.0 175 46.3
C03p28100 Brassica napus HOM05D005723 ORTHO05D005968 5.9e-33 145.6 209 43.5
Os09g0553300 Oryza sativa ssp. japonica HOM05D005723 ORTHO05D005968 5.9e-33 145.6 110 63.6
HPP92_009024 Vanilla planifolia HOM05D005723 ORTHO05D005968 5.9e-33 145.6 112 62.5
CDE05G1067 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 7.7e-33 145.2 174 44.8
CDE05G2791 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 7.7e-33 145.2 174 45.4
Nn2g15696 Nelumbo nucifera HOM05D005723 ORTHO05D005968 7.7e-33 145.2 158 51.3
Peaxi162Scf00258g00623 Petunia axillaris HOM05D005723 ORTHO05D005968 7.7e-33 145.2 180 47.2
Lj1g0008741 Lotus japonicus HOM05D005723 ORTHO05D005968 1.0e-32 144.8 127 58.3
BcaC01g05310 Brassica carinata HOM05D005723 ORTHO05D005968 1.3e-32 144.4 223 41.7
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 1.3e-32 144.4 183 46.4
CiPaw.09G030000 Carya illinoinensis HOM05D005723 ORTHO05D005968 1.3e-32 144.4 158 50.0
Glyma.03G145000 Glycine max HOM05D005723 ORTHO05D005968 1.3e-32 144.4 110 63.6
Atru.chr8.1119 Acer truncatum HOM05D005723 ORTHO05D005968 1.7e-32 144.1 222 41.0
Glyma.19G148100 Glycine max HOM05D005723 ORTHO05D005968 1.7e-32 144.1 110 63.6
Gohir.D09G124200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 1.7e-32 144.1 135 55.6
Gorai.006G143000 Gossypium raimondii HOM05D005723 ORTHO05D005968 1.7e-32 144.1 135 55.6
HanXRQChr13g0390481 Helianthus annuus HOM05D005723 ORTHO05D005968 1.7e-32 144.1 174 46.0
Sed0013306 Sechium edule HOM05D005723 ORTHO05D005968 1.7e-32 144.1 185 47.0
Actinidia17274 Actinidia chinensis HOM05D005723 ORTHO05D005968 2.2e-32 143.7 175 47.4
Aa31LG1G24130 Aethionema arabicum HOM05D005723 ORTHO05D005968 2.2e-32 143.7 228 40.8
CARHR137150 Cardamine hirsuta HOM05D005723 ORTHO05D005968 2.2e-32 143.7 197 44.2
Duzib093G0286 Durio zibethinus HOM05D005723 ORTHO05D005968 2.2e-32 143.7 135 56.3
Gohir.A09G128200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 2.2e-32 143.7 135 55.6
Oeu024483.2 Olea europaea HOM05D005723 ORTHO05D005968 2.2e-32 143.7 110 63.6
PSO384G0309 Papaver somniferum HOM05D005723 ORTHO05D005968 2.2e-32 143.7 187 43.3
BraA03t11573Z Brassica rapa HOM05D005723 ORTHO05D005968 2.9e-32 143.3 208 42.8
Cpa.g.sc85.50 Carica papaya HOM05D005723 ORTHO05D005968 2.9e-32 143.3 157 51.6
Cc06_g15920 Coffea canephora HOM05D005723 ORTHO05D005968 2.9e-32 143.3 158 50.0
FvH4_6g22180 Fragaria vesca HOM05D005723 ORTHO05D005968 2.9e-32 143.3 158 50.0
FAN14G2504 Fragaria x ananassa HOM05D005723 ORTHO05D005968 2.9e-32 143.3 158 50.0
PSO339G0271 Papaver somniferum HOM05D005723 ORTHO05D005968 2.9e-32 143.3 187 43.3
VMungo1383G0807 Vigna mungo HOM05D005723 ORTHO05D005968 2.9e-32 143.3 111 61.3
GSVIVG01033492001 Vitis vinifera HOM05D005723 ORTHO05D005968 2.9e-32 143.3 158 51.3
BcaB01g03439 Brassica carinata HOM05D005723 ORTHO05D005968 3.8e-32 142.9 208 43.3
Medtr7g093280 Medicago truncatula HOM05D005723 ORTHO05D005968 3.8e-32 142.9 110 62.7
BcaC02g12456 Brassica carinata HOM05D005723 ORTHO05D005968 5.0e-32 142.5 158 50.6
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 5.0e-32 142.5 183 45.9
BolC4t21962H Brassica oleracea HOM05D005723 ORTHO05D005968 5.0e-32 142.5 158 50.6
Ciclev10013558m.g Citrus clementina HOM05D005723 ORTHO05D005968 5.0e-32 142.5 157 51.0
TPR.G18229 Trifolium pratense HOM05D005723 ORTHO05D005968 5.0e-32 142.5 125 57.6
TAR623G0918 Trochodendron aralioides HOM05D005723 ORTHO05D005968 5.0e-32 142.5 157 51.0
AT2G42070 Arabidopsis thaliana HOM05D005723 ORTHO05D005968 6.5e-32 142.1 158 49.4
CANSAT64G2568 Cannabis sativa HOM05D005723 ORTHO05D005968 6.5e-32 142.1 208 42.8
Carub.0004s2440 Capsella rubella HOM05D005723 ORTHO05D005968 6.5e-32 142.1 158 49.4
FAN02G2166 Fragaria x ananassa HOM05D005723 ORTHO05D005968 6.5e-32 142.1 217 43.8
MBI08_g23085_MAGBIO Magnolia biondii HOM05D005723 ORTHO05D005968 6.5e-32 142.1 161 49.1
Phvul.001G142700 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 6.5e-32 142.1 111 60.4
arahy.Tifrunner.gnm1.ann1.USMU0G Arachis hypogaea HOM05D005723 ORTHO05D005968 8.5e-32 141.7 110 61.8
COL.COLO4_33978 Corchorus olitorius HOM05D005723 ORTHO05D005968 8.5e-32 141.7 158 50.0
Dinv14303 Davidia involucrata HOM05D005723 ORTHO05D005968 8.5e-32 141.7 157 50.3
FAN05G3703 Fragaria x ananassa HOM05D005723 ORTHO05D005968 8.5e-32 141.7 158 49.4
Glyma.09G111000 Glycine max HOM05D005723 ORTHO05D005968 8.5e-32 141.7 110 62.7
BraA05t19263Z Brassica rapa HOM05D005723 ORTHO05D005968 1.1e-31 141.4 208 43.8
Ca_08526_v3 Cicer arietinum L. HOM05D005723 ORTHO05D005968 1.1e-31 141.4 110 61.8
QL07p023897 Quercus lobata HOM05D005723 ORTHO05D005968 1.1e-31 141.4 183 45.9
Thecc.05G171800 Theobroma cacao HOM05D005723 ORTHO05D005968 1.1e-31 141.4 110 62.7
Migut.K00036 Erythranthe guttata HOM05D005723 ORTHO05D005968 1.4e-31 141.0 204 41.2
Prupe.7G077500 Prunus persica HOM05D005723 ORTHO05D005968 1.4e-31 141.0 158 49.4
Sopen03g015150 Solanum pennellii HOM05D005723 ORTHO05D005968 1.4e-31 141.0 183 45.4
AL4G40430 Arabidopsis lyrata HOM05D005723 ORTHO05D005968 1.9e-31 140.6 158 49.4
MD14G1055000 Malus domestica HOM05D005723 ORTHO05D005968 1.9e-31 140.6 110 62.7
RcHm_v2.0_Chr3g0479531 Rosa chinensis HOM05D005723 ORTHO05D005968 1.9e-31 140.6 158 48.1
Solyc03g062830.3 Solanum lycopersicum HOM05D005723 ORTHO05D005968 1.9e-31 140.6 183 45.4
Hma1.2p1_0648F.1_g195110 Hydrangea macrophylla HOM05D005723 ORTHO05D005968 2.5e-31 140.2 175 45.7
Phvul.007G260200 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 2.5e-31 140.2 110 62.7
SalBow1G1145 Salvia bowleyana HOM05D005723 ORTHO05D005968 2.5e-31 140.2 110 60.9
VMungo0720G2417 Vigna mungo HOM05D005723 ORTHO05D005968 2.5e-31 140.2 131 55.7
C04p03240 Brassica napus HOM05D005723 ORTHO05D005968 4.2e-31 139.4 158 50.0
MD12G1056700 Malus domestica HOM05D005723 ORTHO05D005968 4.2e-31 139.4 158 48.7
Thhalv10017043m.g Eutrema salsugineum HOM05D005723 ORTHO05D005968 5.5e-31 139.0 158 49.4
Lalb_Chr18g0047891 Lupinus albus HOM05D005723 ORTHO05D005968 5.5e-31 139.0 110 60.9
Psat3g068400 Pisum sativum HOM05D005723 ORTHO05D005968 5.5e-31 139.0 125 56.8
Ah.04g152500 Amaranthus hybridus HOM05D005723 ORTHO05D005968 7.2e-31 138.7 158 47.5
Aqoxy1G00026 Aquilegia oxysepala HOM05D005723 ORTHO05D005968 7.2e-31 138.7 172 45.9
ClCG10G017570 Citrullus lanatus HOM05D005723 ORTHO05D005968 7.2e-31 138.7 180 47.2
THA.LOC104802583 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 1.6e-30 137.5 195 42.1
THA.LOC104824477 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 1.6e-30 137.5 195 41.5
arahy.Tifrunner.gnm1.ann1.4E6ATU Arachis hypogaea HOM05D005723 ORTHO05D005968 2.7e-30 136.7 178 45.5
EL10Ac3g06909 Beta vulgaris HOM05D005723 ORTHO05D005968 2.7e-30 136.7 181 46.4
Lju124A25G33 Lonicera japonica HOM05D005723 ORTHO05D005968 2.7e-30 136.7 158 47.5
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 6.1e-30 135.6 158 48.1
Cre06.g285200 Chlamydomonas reinhardtii HOM05D005723 ORTHO05D005968 1.8e-29 134.0 184 42.4
Sp4g24280 Schrenkiella parvula HOM05D005723 ORTHO05D005968 1.8e-29 134.0 110 60.9
MSTRG.6477 Avicennia marina HOM05D005723 ORTHO05D005968 3.0e-29 133.3 174 44.8
Lsat_1_v5_gn_5_163580 Lactuca sativa HOM05D005723 ORTHO05D005968 6.7e-29 132.1 170 44.1
Nitab4.5_0002488g0020 Nicotiana tabacum HOM05D005723 ORTHO05D005968 1.5e-28 131.0 158 47.5
PRCOL_00004505 Prasinoderma coloniale HOM05D005723 ORTHO05D005968 1.5e-28 131.0 161 46.0
DCAR_019848 Daucus carota HOM05D005723 ORTHO05D005968 1.2e-25 121.3 183 41.5
Oeu034265.1 Olea europaea HOM05D005723 ORTHO05D005968 1.3e-24 117.9 89 67.4
AUR62012024 Chenopodium quinoa HOM05D005723 ORTHO05D005968 1.7e-24 117.5 137 48.9
Sed0026560 Sechium edule HOM05D005723 ORTHO05D005968 2.3e-21 107.1 108 53.7
SEGI_25574 Sequoiadendron giganteum HOM05D005723 ORTHO05D005968 2.8e-19 100.1 119 52.9
HanXRQChr01g0009761 Helianthus annuus HOM05D005723 ORTHO05D005968 1.1e-18 98.2 113 47.8
AUR62015361 Chenopodium quinoa HOM05D005723 ORTHO05D005968 1.4e-18 97.8 113 47.8
ECA248G2266 Erigeron canadensis HOM05D005723 ORTHO05D005968 7.0e-18 95.5 113 48.7
CBR_g29504 Chara braunii HOM05D005723 ORTHO05D005968 1.2e-17 94.7 118 44.1
arahy.Tifrunner.gnm1.ann1.WEU379 Arachis hypogaea HOM05D005723 ORTHO05D005968 2.0e-17 94.0 169 36.1
TWI74G1261 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 2.2e-16 90.5 148 38.5
unitig_748.g7589 Utricularia gibba HOM05D005723 ORTHO05D005968 2.2e-16 90.5 133 43.6
MCO15G614 Micromonas commoda HOM05D005723 ORTHO05D005968 2.6e-12 77.0 101 38.6
C05p20370 Brassica napus HOM05D005723 ORTHO05D005968 1.7e-11 74.3 47 78.7
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 1.7e-11 74.3 47 78.7
vmacro09121 Vaccinium macrocarpon HOM05D005723 ORTHO05D005968 1.8e-10 70.9 101 36.6
Actinidia38586 Actinidia chinensis HOM05D005723 ORTHO05D005968 7.7e-09 65.5 53 66.0
Gohir.A13G075901 Gossypium hirsutum HOM05D005723 ORTHO05D005968 5.0e-08 62.8 45 68.9
MSTRG.10844 Avicennia marina HOM05D005723 ORTHO05D005968 1.9e-07 60.8 87 47.1
Haze_19995 Corylus avellana HOM05D005723 ORTHO05D005968 4.2e-07 59.7 39 59.0
Haze_19996 Corylus avellana HOM05D005723 ORTHO05D005968 4.2e-07 59.7 39 79.5


User provided reference genes

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