Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.9e-283 978.4 458 100.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.0e-270 933.3 453 93.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.3e-207 726.5 463 69.8
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.5e-205 718.4 466 70.4
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.1e-194 682.6 460 67.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 6.9e-193 677.6 450 67.3
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.6e-192 675.6 449 67.0
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.4e-192 675.2 464 65.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 7.6e-192 674.1 451 68.1
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.0e-191 673.7 460 64.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.7e-191 672.9 446 66.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.2e-191 672.5 459 65.1
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 3.8e-191 671.8 462 64.5
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.8e-191 671.8 449 67.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 6.5e-191 671.0 450 65.8
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 8.4e-191 670.6 446 66.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-190 670.2 449 66.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.2e-190 668.7 451 66.5
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 4.2e-190 668.3 450 65.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 451 66.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 7.1e-190 667.5 450 66.4
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.2e-189 666.8 449 66.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.2e-189 666.8 450 65.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.1e-189 666.0 451 65.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.7e-189 665.6 461 64.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.7e-189 665.6 471 63.7
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 4.6e-189 664.8 451 65.6
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 6.0e-189 664.5 451 65.6
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.0e-188 663.7 451 65.2
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.3e-188 663.3 452 65.9
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.3e-188 663.3 461 64.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.3e-188 663.3 461 64.6
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.8e-188 662.9 449 66.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 3.9e-188 661.8 451 66.1
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 3.9e-188 661.8 451 65.2
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 5.1e-188 661.4 451 66.1
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 6.7e-188 661.0 450 66.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 6.7e-188 661.0 450 66.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 6.7e-188 661.0 455 65.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 6.7e-188 661.0 452 65.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 8.7e-188 660.6 451 65.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 8.7e-188 660.6 450 65.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.5e-187 659.8 450 65.8
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.5e-187 659.8 450 65.8
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.9e-187 659.4 450 65.6
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.5e-187 659.1 451 66.1
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.3e-187 658.7 451 65.0
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 5.7e-187 657.9 450 64.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 5.7e-187 657.9 467 63.6
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.4e-187 657.5 450 66.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 9.6e-187 657.1 451 65.2
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.8e-186 655.6 451 64.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.7e-186 655.2 451 65.9
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 4.8e-186 654.8 451 64.1
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 4.8e-186 654.8 443 66.4
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 4.8e-186 654.8 461 65.3
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-185 653.7 454 65.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.8e-185 652.9 460 63.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.4e-185 652.5 451 64.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.1e-185 652.1 454 63.9
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.1e-185 652.1 451 65.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 4.1e-185 651.7 450 64.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 6.9e-185 651.0 451 65.0
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 6.9e-185 651.0 453 64.0
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.5e-184 649.8 472 61.2
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.0e-184 649.4 451 65.2
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.4e-184 648.7 462 63.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.2e-183 646.0 458 63.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.1e-181 639.4 460 62.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 4.6e-181 638.3 450 64.2
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.0e-180 637.1 450 64.2
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.3e-180 636.7 450 64.2
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.7e-180 634.4 450 63.8
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.7e-180 634.0 450 64.0
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 8.2e-178 627.5 450 63.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.4e-177 626.7 450 62.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.0e-175 620.5 458 61.4
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.3e-175 620.2 451 61.9
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.7e-175 619.8 443 62.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.7e-175 619.8 449 61.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.2e-175 619.4 477 60.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.9e-174 616.3 449 61.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.2e-174 615.5 450 60.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 7.2e-174 614.4 443 62.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.2e-168 597.0 460 60.2
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 3.8e-167 592.0 488 56.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.3e-164 582.8 450 58.7
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.3e-163 578.9 464 57.1
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 5.7e-163 578.2 486 56.4
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 7.0e-161 571.2 394 65.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.2e-158 562.4 450 56.7
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.1e-145 520.8 443 54.6
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.8e-140 503.4 340 66.8
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.4e-139 499.2 338 67.8
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-138 497.3 337 67.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.7e-138 495.7 341 66.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.7e-138 495.7 341 66.9
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.7e-138 495.7 337 67.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 4.9e-138 495.4 338 65.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.0e-137 491.5 338 67.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.0e-136 490.0 337 65.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.6e-133 480.3 352 64.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 4.0e-132 475.7 321 67.6
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.4e-131 472.6 289 72.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-129 466.8 337 62.6
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.4e-123 446.0 277 72.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 7.8e-120 434.9 289 66.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.3e-118 428.3 280 67.9
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.1e-113 412.5 291 63.2
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 7.8e-112 408.3 337 57.3
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.6e-110 402.1 451 43.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 7.8e-104 381.7 280 62.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-102 377.5 280 61.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 7.3e-102 375.2 488 38.7
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.9e-50 203.8 143 58.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.9e-47 193.4 110 76.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.9e-47 193.4 110 76.4
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.8e-47 192.2 110 75.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.5e-41 174.1 160 51.2
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.3e-23 114.4 88 60.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.2e-06 58.9 40 62.5


User provided reference genes

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