Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.2e-168 595.5 290 100.0
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.1e-123 446.0 275 77.8
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 3.0e-48 196.4 280 40.0
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.0e-45 188.0 263 39.9
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.9e-35 153.3 268 35.4
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 4.9e-35 152.5 276 33.7
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.2e-33 147.9 268 32.1
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.6e-33 147.5 262 34.0
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 2.1e-33 147.1 274 34.3
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 2.1e-33 147.1 263 33.8
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 2.7e-33 146.7 274 30.7
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 2.7e-33 146.7 268 32.8
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 6.0e-33 145.6 269 33.8
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 1.0e-32 144.8 266 35.3
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 1.0e-32 144.8 266 33.1
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.3e-32 144.4 263 33.5
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 3.0e-32 143.3 267 33.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 3.9e-32 142.9 270 31.5
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 5.1e-32 142.5 272 30.9
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 8.6e-32 141.7 265 31.7
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 1.5e-31 141.0 266 30.8
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.5e-31 141.0 263 31.2
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.5e-31 141.0 263 31.2
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 3.3e-31 139.8 264 32.2
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 4.3e-31 139.4 268 31.3
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 4.3e-31 139.4 275 34.2
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.3e-31 139.4 268 31.3
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 4.3e-31 139.4 272 32.4
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 5.6e-31 139.0 271 31.0
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 5.6e-31 139.0 271 31.0
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 7.3e-31 138.7 264 33.0
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 9.5e-31 138.3 270 31.1
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 1.2e-30 137.9 264 32.2
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 1.6e-30 137.5 277 32.5
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.6e-30 137.5 265 32.1
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 2.1e-30 137.1 261 32.2
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.1e-30 137.1 247 33.2
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 2.8e-30 136.7 258 34.1
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 8.1e-30 135.2 255 31.0
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 8.1e-30 135.2 265 31.3
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.1e-29 134.8 246 33.7
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.8e-29 134.0 269 31.6
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 3.1e-29 133.3 260 30.8
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 3.1e-29 133.3 256 30.9
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 6.8e-29 132.1 267 30.3
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.5e-28 131.0 260 30.4
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 1.5e-28 131.0 242 32.2
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 2.0e-28 130.6 256 32.4
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 2.6e-28 130.2 267 30.3
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 2.6e-28 130.2 275 33.1
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 4.4e-28 129.4 265 31.7
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 4.4e-28 129.4 260 33.1
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 9.9e-28 128.3 265 31.3
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 9.9e-28 128.3 248 30.6
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 3.8e-27 126.3 265 31.3
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 3.8e-27 126.3 241 32.0
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 4.9e-27 125.9 260 30.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 6.4e-27 125.6 262 29.0
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 8.4e-27 125.2 264 29.2
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 2.4e-26 123.6 264 30.3
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 3.2e-26 123.2 261 33.3
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 3.2e-26 123.2 243 30.9
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 4.1e-26 122.9 266 28.9
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 4.1e-26 122.9 250 29.6
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 5.4e-26 122.5 263 29.7
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 5.4e-26 122.5 159 42.1
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 5.4e-26 122.5 246 29.3
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.2e-25 121.3 140 45.0
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.2e-25 121.3 257 28.4
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 4.6e-25 119.4 262 28.6
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 1.7e-24 117.5 253 30.0
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.7e-24 117.5 182 37.9
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 1.7e-24 117.5 182 36.8
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.0e-24 116.7 135 45.2
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 8.6e-24 115.2 258 31.4
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.2e-22 111.3 171 38.6
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.7e-22 109.4 135 42.2
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.4e-18 97.8 130 41.5
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.5e-17 93.2 117 41.9
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 3.0e-16 90.1 261 28.7
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.1e-14 82.0 149 32.2
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-13 80.9 136 33.1
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.0e-13 79.7 138 35.5
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-12 77.4 129 34.9
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-12 76.6 131 32.8
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.8e-12 75.9 117 39.3
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-10 71.6 131 32.8
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-10 71.2 118 38.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.1e-10 68.9 180 26.7
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 8.7e-08 62.0 52 51.9
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.1e-07 61.6 130 26.2
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 4.8e-06 56.2 63 41.3
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 6.2e-06 55.8 37 54.1
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.2e-06 55.8 37 54.1


User provided reference genes

Program Settings