Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 5.0e-102 374.4 184 100.0
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 5.7e-29 131.7 141 44.0
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.3e-28 130.6 170 41.8
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 2.2e-28 129.8 171 40.9
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.8e-27 126.7 172 40.1
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.1e-27 125.6 139 45.3
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 4.1e-27 125.6 142 40.8
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 5.3e-27 125.2 160 41.2
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 6.9e-27 124.8 138 42.8
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.2e-26 124.0 144 43.1
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.2e-26 124.0 147 40.1
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.5e-26 123.6 142 41.5
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 2.0e-26 123.2 147 40.1
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.0e-26 123.2 147 40.1
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 3.4e-26 122.5 147 40.1
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.4e-26 122.5 134 41.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 4.5e-26 122.1 144 39.6
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 5.9e-26 121.7 138 41.3
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 5.9e-26 121.7 144 43.1
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 5.9e-26 121.7 160 40.0
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 5.9e-26 121.7 134 44.8
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 7.7e-26 121.3 138 41.3
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 7.7e-26 121.3 138 41.3
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.0e-25 120.9 131 43.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.0e-25 120.9 138 41.3
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.0e-25 120.9 138 41.3
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.0e-25 120.9 131 42.7
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.3e-25 120.6 145 39.3
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.3e-25 120.6 139 43.9
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.2e-25 119.8 130 42.3
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 2.2e-25 119.8 137 41.6
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.2e-25 119.8 138 40.6
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.9e-25 119.4 161 40.4
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.9e-25 119.4 160 39.4
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.0e-25 118.6 134 41.8
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 8.5e-25 117.9 132 43.2
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 8.5e-25 117.9 143 41.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.1e-24 117.5 143 38.5
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.5e-24 116.3 162 38.9
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 4.2e-24 115.5 153 37.3
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 4.2e-24 115.5 153 37.3
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 5.5e-24 115.2 137 39.4
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 5.5e-24 115.2 138 39.9
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 5.5e-24 115.2 127 42.5
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 5.5e-24 115.2 143 40.6
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 7.2e-24 114.8 132 43.2
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 7.2e-24 114.8 134 42.5
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 9.4e-24 114.4 124 41.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 9.4e-24 114.4 181 35.4
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 1.2e-23 114.0 131 41.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.2e-23 114.0 168 36.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.6e-23 113.6 131 42.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.6e-23 113.6 145 39.3
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.1e-23 113.2 134 40.3
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.7e-23 112.8 144 38.9
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 3.6e-23 112.5 161 37.3
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 3.6e-23 112.5 131 41.2
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.6e-23 112.5 130 42.3
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 4.6e-23 112.1 174 36.8
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 6.1e-23 111.7 143 37.8
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 6.1e-23 111.7 124 40.3
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 6.1e-23 111.7 142 38.0
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.4e-22 110.5 135 41.5
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.8e-22 110.2 137 42.3
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 2.3e-22 109.8 136 39.7
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 3.0e-22 109.4 131 39.7
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 3.9e-22 109.0 134 40.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 3.9e-22 109.0 129 41.1
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 5.1e-22 108.6 136 39.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 6.7e-22 108.2 125 41.6
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 6.7e-22 108.2 130 40.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.1e-21 107.5 123 42.3
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.1e-21 107.5 132 38.6
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.5e-21 107.1 144 38.9
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.5e-21 107.1 132 40.9
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.5e-21 106.3 131 38.9
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.5e-21 106.3 131 38.9
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.5e-21 106.3 131 38.9
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 3.3e-21 105.9 124 40.3
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 3.3e-21 105.9 187 32.6
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 4.3e-21 105.5 132 38.6
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 5.7e-21 105.1 134 41.8
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 5.7e-21 105.1 134 38.8
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 7.4e-21 104.8 134 41.8
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 7.4e-21 104.8 135 40.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 9.7e-21 104.4 135 38.5
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.3e-20 104.0 141 39.7
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.7e-20 103.6 131 38.2
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.7e-20 103.6 144 36.1
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 4.8e-20 102.1 143 38.5
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 6.3e-20 101.7 153 37.3
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.8e-19 100.1 141 39.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.4e-19 99.8 157 37.6
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 4.1e-19 99.0 136 37.5
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.1e-19 99.0 144 35.4
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 5.3e-19 98.6 111 40.5
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 5.3e-19 98.6 144 34.0
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 4.5e-18 95.5 110 40.9
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 4.5e-18 95.5 149 37.6
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 7.7e-18 94.7 119 43.7
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 8.5e-17 91.3 122 39.3
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 5.5e-16 88.6 118 38.1
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 5.5e-16 88.6 121 36.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.3e-14 83.2 142 33.1
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.6e-13 79.7 95 40.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.7e-12 77.0 163 32.5
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 4.5e-10 68.9 79 48.1
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 7.7e-10 68.2 74 45.9
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.9e-09 66.2 55 49.1
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 5.0e-09 65.5 57 50.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 8.5e-09 64.7 140 32.1
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.2e-07 60.8 114 32.5
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 4.0e-06 55.8 155 26.5


User provided reference genes

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