Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 5.1e-260 900.6 464 100.0
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 5.1e-260 900.6 464 100.0
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.5e-73 281.2 392 44.1
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.1e-49 201.8 217 47.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.6e-43 179.9 219 43.8
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.0e-42 177.2 214 45.8
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.1e-41 175.3 226 46.5
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.1e-41 175.3 216 47.2
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.5e-41 174.9 221 47.5
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.5e-41 174.9 205 47.8
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 3.3e-41 173.7 188 50.0
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 5.6e-41 172.9 224 46.0
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.2e-40 171.8 216 47.7
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 2.1e-40 171.0 236 44.1
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.8e-40 170.6 216 45.4
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 2.8e-40 170.6 217 46.1
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 3.6e-40 170.2 216 46.3
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 3.6e-40 170.2 212 47.6
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 4.7e-40 169.9 190 48.4
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.7e-40 169.9 213 48.8
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 6.2e-40 169.5 216 45.8
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 6.2e-40 169.5 224 45.5
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.2e-40 169.5 213 44.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.1e-39 168.7 213 48.4
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.4e-39 168.3 213 44.6
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.8e-39 167.9 213 47.9
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 2.3e-39 167.5 216 44.9
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 4.0e-39 166.8 216 44.0
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 4.0e-39 166.8 224 43.8
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 4.0e-39 166.8 213 45.1
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 5.2e-39 166.4 213 46.0
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 5.2e-39 166.4 213 45.5
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 5.2e-39 166.4 220 44.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 6.8e-39 166.0 213 45.5
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 6.8e-39 166.0 225 43.6
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 8.9e-39 165.6 216 44.9
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 8.9e-39 165.6 216 46.8
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.2e-38 165.2 230 42.2
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.2e-38 165.2 214 45.8
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-38 165.2 216 47.7
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.5e-38 164.9 217 45.2
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.5e-38 164.9 217 44.7
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.5e-38 164.9 216 44.0
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.5e-38 164.9 216 44.0
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.5e-38 164.9 219 45.2
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.5e-38 164.9 218 45.0
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 2.0e-38 164.5 213 44.6
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 2.0e-38 164.5 217 46.1
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 2.0e-38 164.5 215 44.2
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 2.6e-38 164.1 216 44.0
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 2.6e-38 164.1 216 44.4
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 2.6e-38 164.1 209 44.0
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.6e-38 164.1 216 43.5
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 4.4e-38 163.3 224 43.8
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 4.4e-38 163.3 216 44.4
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 4.4e-38 163.3 214 45.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 5.8e-38 162.9 213 44.6
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 5.8e-38 162.9 216 44.9
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 7.6e-38 162.5 212 45.3
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 9.9e-38 162.2 213 45.5
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 9.9e-38 162.2 267 40.1
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.3e-37 161.8 224 43.3
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.3e-37 161.8 216 45.8
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.3e-37 161.8 224 42.9
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.7e-37 161.4 213 44.1
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 2.2e-37 161.0 214 44.4
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.2e-37 161.0 227 42.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 2.2e-37 161.0 224 42.9
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 2.9e-37 160.6 181 49.7
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 2.9e-37 160.6 216 43.5
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 4.9e-37 159.8 219 43.8
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 6.4e-37 159.5 249 42.6
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 8.4e-37 159.1 233 42.5
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.1e-36 158.7 216 42.1
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.4e-36 158.3 216 44.0
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 1.4e-36 158.3 226 42.9
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.4e-36 157.5 219 44.3
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 3.2e-36 157.1 216 44.0
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 3.2e-36 157.1 225 41.3
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 4.1e-36 156.8 276 38.4
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 4.1e-36 156.8 225 41.3
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 7.1e-36 156.0 233 42.9
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 7.1e-36 156.0 212 43.9
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 7.1e-36 156.0 216 44.0
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 9.2e-36 155.6 227 41.4
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.2e-35 155.2 216 41.7
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 1.2e-35 155.2 222 43.2
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.2e-35 155.2 216 42.6
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.6e-35 154.8 216 41.7
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 2.7e-35 154.1 238 38.7
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 3.5e-35 153.7 216 43.5
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.6e-35 153.3 229 42.8
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 6.0e-35 152.9 213 41.8
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 7.8e-35 152.5 218 42.2
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 7.8e-35 152.5 224 42.9
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.3e-34 151.8 216 43.1
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 5.1e-34 149.8 191 45.5
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.6e-34 149.4 216 42.1
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.6e-34 149.4 216 42.1
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.6e-34 149.4 241 40.7
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 8.6e-34 149.1 216 41.7
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.1e-33 148.7 203 41.9
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.1e-33 148.7 203 41.9
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 3.3e-33 147.1 230 38.7
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 5.6e-33 146.4 191 45.0
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.2e-32 145.2 214 41.6
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.6e-32 144.8 262 35.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 3.6e-32 143.7 220 39.1
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.4e-31 141.0 241 39.4
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.4e-31 141.0 250 39.2
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 3.1e-31 140.6 263 36.1
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 1.2e-30 138.7 232 37.1
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 4.4e-30 136.7 211 41.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.9e-29 134.0 142 50.7
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.9e-28 131.3 215 42.3
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.6e-27 128.3 226 35.4
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.1e-25 122.1 150 45.3
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.5e-25 120.9 409 29.6
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 7.3e-25 119.4 215 34.9
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-19 101.7 147 46.9
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 3.3e-17 94.0 147 41.5
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 1.3e-13 82.0 177 31.6
MCO07G740 Micromonas commoda HOM05D006231 ORTHO05D007857 1.6e-11 75.1 131 37.4
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 4.6e-11 73.6 225 24.9
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 8.7e-10 69.3 97 42.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.3e-08 65.5 78 46.2
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.1e-07 62.4 85 38.8
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.3e-07 60.1 80 38.8
PRCOL_00000814 Prasinoderma coloniale HOM05D005733 ORTHO05D006928 2.6e-06 57.8 116 31.9
PRCOL_00000981 Prasinoderma coloniale HOM05D006270 ORTHO05D007755 5.8e-06 56.6 94 41.5


User provided reference genes

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