Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_31660 Physcomitrium patens HOM05D001560 ORTHO05D003613 2.3e-154 548.9 281 100.0
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 7.8e-38 161.8 185 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 3.9e-21 106.3 162 37.0
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 4.3e-20 102.8 126 40.5
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 4.3e-20 102.8 126 40.5
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 6.2e-19 99.0 156 37.2
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 6.2e-19 99.0 156 37.2
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.4e-18 97.8 126 39.7
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.4e-18 97.8 126 39.7
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.8e-18 97.4 126 39.7
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 3.1e-18 96.7 126 39.7
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.0e-18 96.3 126 38.9
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 6.9e-18 95.5 126 38.9
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 9.0e-18 95.1 130 38.5
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.2e-17 94.7 131 38.2
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 1.2e-17 94.7 118 39.8
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-17 94.0 126 39.7
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 3.4e-17 93.2 126 38.9
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.4e-17 93.2 126 39.7
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 3.4e-17 93.2 130 37.7
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.5e-17 92.8 131 38.2
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 4.5e-17 92.8 123 39.0
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 7.6e-17 92.0 167 34.7
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 7.6e-17 92.0 126 38.1
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 7.6e-17 92.0 126 38.1
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 7.6e-17 92.0 126 38.1
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 7.6e-17 92.0 126 38.1
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 9.9e-17 91.7 126 38.1
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 9.9e-17 91.7 126 38.1
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 9.9e-17 91.7 126 38.1
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 9.9e-17 91.7 126 38.1
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 9.9e-17 91.7 125 37.6
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 9.9e-17 91.7 130 37.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.7e-16 90.9 130 37.7
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.2e-16 90.5 126 38.1
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 2.2e-16 90.5 126 38.1
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 2.2e-16 90.5 126 37.3
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 2.2e-16 90.5 126 38.1
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 2.9e-16 90.1 126 38.1
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.9e-16 90.1 126 38.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.9e-16 90.1 126 38.1
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.9e-16 89.4 126 38.1
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.9e-16 89.4 126 38.1
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.9e-16 89.4 126 38.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.9e-16 89.4 125 37.6
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 4.9e-16 89.4 125 37.6
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-16 88.6 120 40.0
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 1.4e-15 87.8 169 31.4
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.4e-15 87.8 130 36.9
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.9e-15 87.4 134 37.3
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-15 87.0 123 38.2
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-15 87.0 114 39.5
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-15 87.0 125 37.6
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 3.2e-15 86.7 145 33.8
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 3.2e-15 86.7 134 38.1
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 4.2e-15 86.3 103 39.8
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 5.4e-15 85.9 173 33.5
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 5.4e-15 85.9 173 33.5
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 5.4e-15 85.9 125 36.8
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-15 85.9 125 36.8
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-15 85.9 128 36.7
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 9.3e-15 85.1 147 36.1
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 9.3e-15 85.1 126 37.3
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-15 85.1 123 39.0
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-15 85.1 125 37.6
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 1.2e-14 84.7 145 35.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.2e-14 84.7 169 33.7
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-14 84.3 125 36.8
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 2.1e-14 84.0 145 33.1
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 2.1e-14 84.0 145 35.2
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 2.7e-14 83.6 145 33.8
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 2.7e-14 83.6 145 34.5
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-14 83.2 128 35.9
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-14 83.2 128 35.9
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-14 83.2 125 36.0
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 4.6e-14 82.8 145 34.5
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-14 82.8 114 37.7
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 4.6e-14 82.8 145 34.5
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 6.0e-14 82.4 145 33.8
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 6.0e-14 82.4 145 34.5
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 7.9e-14 82.0 145 33.1
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 7.9e-14 82.0 145 34.5
Cpa.g.sc161.31 Carica papaya HOM05D003614 ORTHO05D004156 1.0e-13 81.6 145 34.5
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.0e-13 81.6 122 36.9
AUR62026155 Chenopodium quinoa HOM05D003614 ORTHO05D004156 1.3e-13 81.3 145 33.1
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 1.3e-13 81.3 145 34.5
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 1.8e-13 80.9 145 32.4
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 2.3e-13 80.5 145 33.8
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 2.3e-13 80.5 144 33.3
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.3e-13 80.5 130 34.6
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 2.3e-13 80.5 157 33.8
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 3.0e-13 80.1 157 34.4
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 3.0e-13 80.1 225 29.3
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 3.9e-13 79.7 145 32.4
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.9e-13 79.7 125 35.2
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 5.1e-13 79.3 145 32.4
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 5.1e-13 79.3 157 33.8
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 6.7e-13 79.0 145 33.1
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.7e-13 79.0 128 31.2
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 6.7e-13 79.0 145 33.1
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 6.7e-13 79.0 145 33.8
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 6.7e-13 79.0 226 28.3
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 8.7e-13 78.6 173 31.8
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 8.7e-13 78.6 145 33.1
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 1.5e-12 77.8 145 33.1
A10p32060 Brassica napus HOM05D003614 ORTHO05D004156 1.9e-12 77.4 144 31.9
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 1.9e-12 77.4 145 33.1
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 1.9e-12 77.4 171 30.4
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 1.9e-12 77.4 171 32.2
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.5e-12 77.0 172 32.0
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 2.5e-12 77.0 145 33.8
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.5e-12 77.0 145 33.8
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.5e-12 77.0 145 33.8
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.5e-12 77.0 145 33.8
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-12 77.0 119 37.0
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 3.3e-12 76.6 145 31.7
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 3.3e-12 76.6 145 33.8
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 3.3e-12 76.6 228 28.5
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 4.3e-12 76.3 172 30.2
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 4.3e-12 76.3 200 30.5
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 7.4e-12 75.5 225 29.3
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 9.6e-12 75.1 145 30.3
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 9.6e-12 75.1 226 29.6
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 1.3e-11 74.7 103 38.8
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 1.3e-11 74.7 89 42.7
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 1.3e-11 74.7 132 34.8
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 1.3e-11 74.7 226 28.3
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 1.3e-11 74.7 172 29.7
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 1.6e-11 74.3 174 31.6
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 1.6e-11 74.3 174 31.6
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 1.6e-11 74.3 173 30.1
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 1.6e-11 74.3 229 27.9
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 2.1e-11 73.9 182 29.1
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 2.1e-11 73.9 229 27.5
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 2.1e-11 73.9 145 32.4
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 2.8e-11 73.6 109 37.6
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 2.8e-11 73.6 182 31.3
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 3.7e-11 73.2 115 39.1
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.7e-11 73.2 81 45.7
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 3.7e-11 73.2 145 31.7
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 3.7e-11 73.2 145 31.7
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 3.7e-11 73.2 120 35.0
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 4.8e-11 72.8 226 28.3
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 4.8e-11 72.8 227 29.5
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 8.1e-11 72.0 130 33.1
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 1.1e-10 71.6 225 28.4
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 1.1e-10 71.6 227 30.0
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 1.1e-10 71.6 120 32.5
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 1.4e-10 71.2 225 27.6
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 1.4e-10 71.2 145 31.0
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.4e-10 71.2 85 42.4
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 1.4e-10 71.2 228 27.2
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 1.8e-10 70.9 229 31.0
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 1.8e-10 70.9 171 29.8
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 3.1e-10 70.1 145 33.1
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 3.1e-10 70.1 169 27.8
QL11p043133 Quercus lobata HOM05D003614 ORTHO05D004156 6.9e-10 68.9 103 35.9
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 6.9e-10 68.9 109 38.5
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-09 68.2 90 35.6
AagrBONN_evm.TU.Sc2ySwM_117.1402 Anthoceros agrestis HOM05D001806 ORTHO05D002069 1.5e-09 67.8 145 33.1
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-09 67.0 85 41.2
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 7.6e-09 65.5 128 32.0
Migut.L01806 Erythranthe guttata HOM05D003614 ORTHO05D004156 7.6e-09 65.5 103 30.1
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 7.6e-09 65.5 90 35.6
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 2.2e-08 63.9 140 30.0
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.9e-08 63.5 97 34.0
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 3.8e-08 63.2 101 35.6
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.4e-08 62.4 82 42.7
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-08 62.4 85 37.6
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-08 62.0 154 28.6
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 1.4e-07 61.2 64 45.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-07 60.5 126 31.7
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-07 59.7 100 32.0
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 9.3e-07 58.5 67 47.8
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-06 58.2 85 41.2
ECA233G5653 Erigeron canadensis HOM05D003614 ORTHO05D004156 6.0e-06 55.8 125 29.6


User provided reference genes

Program Settings