Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 4.2e-92 341.3 165 100.0
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 5.8e-41 171.4 117 68.4
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.6e-35 153.3 124 58.9
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 4.7e-35 151.8 125 57.6
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 2.9e-32 142.5 115 59.1
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 7.3e-28 127.9 105 56.2
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 7.3e-28 127.9 105 52.4
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 9.6e-28 127.5 105 55.2
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.3e-27 127.1 105 53.3
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.6e-27 126.7 117 49.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 3.6e-27 125.6 104 53.8
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 8.1e-27 124.4 102 55.9
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 8.1e-27 124.4 104 54.8
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.4e-26 123.6 106 52.8
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.4e-26 123.6 105 52.4
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 2.4e-26 122.9 114 50.0
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 2.4e-26 122.9 105 55.2
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 4.0e-26 122.1 105 52.4
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.3e-26 121.7 113 52.2
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 5.3e-26 121.7 113 52.2
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 5.3e-26 121.7 105 55.2
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 5.3e-26 121.7 105 54.3
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.9e-26 121.3 105 55.2
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 9.0e-26 120.9 106 54.7
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 1.2e-25 120.6 105 56.2
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.5e-25 120.2 115 48.7
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.5e-25 120.2 111 55.9
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 1.5e-25 120.2 121 48.8
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 2.0e-25 119.8 106 52.8
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 2.6e-25 119.4 117 50.4
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 2.6e-25 119.4 105 52.4
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.6e-25 119.4 116 49.1
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 4.5e-25 118.6 105 54.3
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 5.8e-25 118.2 117 46.2
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 5.8e-25 118.2 104 53.8
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 5.8e-25 118.2 110 47.3
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 5.8e-25 118.2 111 53.2
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 5.8e-25 118.2 106 53.8
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 5.8e-25 118.2 117 47.9
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 9.9e-25 117.5 114 47.4
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 53.3
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 53.3
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 9.9e-25 117.5 105 49.5
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 9.9e-25 117.5 106 53.8
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.3e-24 117.1 115 50.4
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.3e-24 117.1 105 52.4
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.3e-24 117.1 105 52.4
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.3e-24 117.1 106 50.9
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 1.7e-24 116.7 105 48.6
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.7e-24 116.7 105 48.6
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.7e-24 116.7 115 53.9
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 2.2e-24 116.3 105 48.6
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 2.2e-24 116.3 105 51.4
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.2e-24 116.3 106 51.9
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.2e-24 116.3 118 47.5
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 2.2e-24 116.3 105 48.6
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 2.9e-24 115.9 113 48.7
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.8e-24 115.5 105 51.4
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 3.8e-24 115.5 113 48.7
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 4.9e-24 115.2 106 48.1
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 4.9e-24 115.2 106 50.0
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 4.9e-24 115.2 118 48.3
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 4.9e-24 115.2 114 50.9
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 6.4e-24 114.8 117 48.7
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 6.4e-24 114.8 105 51.4
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 6.4e-24 114.8 107 51.4
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 6.4e-24 114.8 103 50.5
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 6.4e-24 114.8 106 48.1
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 6.4e-24 114.8 104 50.0
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 8.4e-24 114.4 105 55.2
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 8.4e-24 114.4 95 54.7
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.4e-23 113.6 105 46.7
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.4e-23 113.6 105 50.5
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.4e-23 113.6 105 52.4
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 2.4e-23 112.8 105 48.6
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.4e-23 112.8 104 49.0
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 3.2e-23 112.5 114 48.2
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 3.2e-23 112.5 113 44.2
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 4.2e-23 112.1 105 44.8
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 4.2e-23 112.1 106 52.8
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 4.2e-23 112.1 114 49.1
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 5.4e-23 111.7 105 47.6
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 5.4e-23 111.7 105 51.4
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 7.1e-23 111.3 112 54.5
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.5e-22 109.0 106 50.0
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 3.5e-22 109.0 113 48.7
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 3.5e-22 109.0 119 47.1
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.0e-21 107.5 105 47.6
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 3.9e-21 105.5 114 50.0
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 7.4e-20 101.3 113 46.0
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 9.6e-20 100.9 107 44.9
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 1.6e-19 100.1 158 36.1
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 2.8e-19 99.4 122 44.3
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 8.1e-19 97.8 105 46.7
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 3.1e-18 95.9 114 44.7
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 9.0e-18 94.4 89 47.2
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.2e-17 94.0 94 42.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 2.6e-17 92.8 107 43.0
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 2.4e-15 86.3 76 52.6
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 4.2e-15 85.5 78 48.7
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 4.2e-15 85.5 68 55.9
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 7.1e-15 84.7 66 59.1
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 6.0e-14 81.6 78 48.7
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.8e-13 80.1 73 52.1
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.5e-12 77.0 119 36.1
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 3.3e-12 75.9 136 31.6
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.1e-11 73.2 69 47.8
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.4e-07 60.5 43 58.1
Pp3c7_25710 Physcomitrium patens HOM05D006897 ORTHO05D309391 2.1e-06 56.6 33 66.7
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.0e-06 55.1 53 45.3


User provided reference genes

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