Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 6.4e-79 297.4 150 100.0
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.3e-26 123.6 111 55.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 2.8e-26 122.5 128 49.2
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 6.9e-25 117.9 108 60.2
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 3.4e-24 115.5 124 50.8
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 7.6e-24 114.4 120 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 1.0e-23 114.0 133 48.1
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.2e-23 112.8 118 53.4
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.2e-23 112.8 118 51.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 1.1e-22 110.5 118 50.0
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.4e-22 110.2 108 56.5
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.4e-22 110.2 108 56.5
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.9e-22 109.8 124 47.6
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.6e-21 106.7 89 59.6
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.1e-21 106.3 91 52.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.1e-21 106.3 108 50.0
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 2.7e-21 105.9 108 46.3
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.7e-21 105.9 88 54.5
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 3.5e-21 105.5 118 51.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.5e-21 105.5 108 50.9
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.5e-21 105.5 107 54.2
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 4.6e-21 105.1 107 52.3
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 6.0e-21 104.8 126 47.6
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 6.0e-21 104.8 112 50.0
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 7.9e-21 104.4 121 47.1
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.0e-20 104.0 119 50.4
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.0e-20 104.0 126 46.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.0e-20 104.0 115 49.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.3e-20 103.6 108 51.9
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.3e-20 103.6 119 49.6
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.8e-20 103.2 118 50.8
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.8e-20 103.2 121 46.3
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.3e-20 102.8 127 48.0
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 3.0e-20 102.4 123 48.8
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 3.9e-20 102.1 128 47.7
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.1e-20 101.7 90 51.1
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 5.1e-20 101.7 92 52.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 5.1e-20 101.7 106 51.9
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.7e-20 101.3 116 46.6
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.1e-19 100.5 103 51.5
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.1e-19 100.5 87 54.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.5e-19 100.1 118 49.2
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.5e-19 100.1 107 53.3
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.5e-19 100.1 130 46.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.5e-19 100.1 125 44.0
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.5e-19 99.4 118 49.2
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.5e-19 99.4 89 56.2
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.5e-19 99.4 115 48.7
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.3e-19 99.0 88 53.4
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 3.3e-19 99.0 107 50.5
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 4.3e-19 98.6 108 49.1
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 4.3e-19 98.6 85 54.1
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 4.3e-19 98.6 105 51.4
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 4.3e-19 98.6 106 51.9
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 4.3e-19 98.6 107 52.3
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.3e-19 98.6 114 46.5
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 5.7e-19 98.2 99 52.5
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 7.4e-19 97.8 89 55.1
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 9.7e-19 97.4 108 50.9
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.3e-18 97.1 105 49.5
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.6e-18 96.7 128 45.3
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.6e-18 96.7 108 52.8
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.6e-18 96.7 88 53.4
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.6e-18 96.7 107 49.5
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 2.2e-18 96.3 108 50.0
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.2e-18 96.3 84 58.3
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.2e-18 96.3 87 57.5
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.2e-18 96.3 119 52.1
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.8e-18 95.9 108 48.1
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 6.3e-18 94.7 103 52.4
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 6.3e-18 94.7 103 50.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 8.2e-18 94.4 106 51.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 1.4e-17 93.6 89 50.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.4e-17 93.6 101 49.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.1e-17 92.4 89 48.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.1e-17 92.4 89 48.3
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.1e-17 92.4 89 48.3
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 3.1e-17 92.4 108 48.1
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 4.1e-17 92.0 108 47.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 4.1e-17 92.0 89 48.3
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 6.9e-17 91.3 89 49.4
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 9.0e-17 90.9 89 49.4
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 9.0e-17 90.9 89 49.4
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.5e-16 90.1 108 45.4
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.5e-16 90.1 108 45.4
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.6e-16 89.4 85 56.5
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 3.4e-16 89.0 108 44.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 3.4e-16 89.0 108 46.3
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 3.4e-16 89.0 108 44.4
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.3e-15 87.0 108 43.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 5.0e-15 85.1 141 39.0
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 6.5e-15 84.7 97 45.4
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 6.5e-15 84.7 108 42.6
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 2.5e-14 82.8 116 43.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.7e-13 79.3 72 56.9
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.0e-12 77.4 86 40.7
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 8.8e-12 74.3 117 41.9
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 8.8e-12 74.3 89 44.9
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.3e-11 72.4 57 52.6
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 6.5e-07 58.2 94 42.6
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.9e-06 56.6 55 47.3
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.5e-06 56.2 72 48.6


User provided reference genes

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