Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.9e-311 1071.6 562 100.0
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 7.6e-210 734.2 565 69.6
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 3.5e-146 522.7 458 58.1
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.0e-145 521.2 460 57.0
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 8.9e-134 481.5 530 49.8
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 5.4e-131 472.2 460 50.9
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.1e-130 470.3 458 54.6
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.7e-130 469.9 490 49.6
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 4.6e-130 469.2 483 49.1
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.3e-129 466.8 490 49.6
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 6.6e-129 465.3 458 52.4
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 6.6e-129 465.3 474 50.0
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 8.6e-129 464.9 488 49.2
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 8.6e-129 464.9 486 48.8
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.5e-128 464.2 468 49.6
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.9e-128 463.8 456 52.2
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 5.6e-128 462.2 468 50.6
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 9.5e-128 461.5 470 49.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.6e-127 460.7 491 48.5
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 1.6e-127 460.7 460 50.2
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 3.6e-127 459.5 454 51.1
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 3.6e-127 459.5 538 47.8
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 4.7e-127 459.1 491 48.3
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.7e-127 459.1 543 46.2
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 6.2e-127 458.8 467 49.5
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 6.2e-127 458.8 479 47.8
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 8.1e-127 458.4 488 49.6
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.1e-126 458.0 492 48.6
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 1.1e-126 458.0 502 47.2
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.1e-126 458.0 541 46.4
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 1.1e-126 458.0 479 48.6
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.1e-126 458.0 470 49.1
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.8e-126 457.2 480 48.8
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 2.3e-126 456.8 533 46.9
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 2.3e-126 456.8 492 48.4
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 3.1e-126 456.4 470 49.4
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 4.0e-126 456.1 483 48.9
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.0e-126 456.1 541 46.2
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 5.2e-126 455.7 526 46.4
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 6.8e-126 455.3 440 53.0
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 8.9e-126 454.9 468 48.5
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.0e-125 453.8 473 48.6
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 2.0e-125 453.8 497 47.7
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 2.6e-125 453.4 492 47.0
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 3.4e-125 453.0 470 48.5
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 4.4e-125 452.6 478 49.8
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 5.8e-125 452.2 470 48.5
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 5.8e-125 452.2 474 48.7
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 9.9e-125 451.4 491 47.7
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 2.2e-124 450.3 458 50.0
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.9e-124 449.9 473 47.4
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.7e-124 449.5 444 50.7
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 4.9e-124 449.1 473 47.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 4.9e-124 449.1 476 47.9
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 6.4e-124 448.7 518 45.8
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 8.4e-124 448.4 466 47.9
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.4e-123 447.6 468 47.9
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 1.4e-123 447.6 527 44.4
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 1.4e-123 447.6 462 49.4
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.4e-123 447.6 478 46.4
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 4.1e-123 446.0 473 46.9
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 4.1e-123 446.0 491 47.3
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 4.1e-123 446.0 499 45.9
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.2e-122 444.5 462 48.1
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.1e-122 443.7 581 44.1
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 4.6e-122 442.6 487 46.8
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.8e-122 441.8 473 48.0
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.3e-121 440.3 536 43.5
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 3.0e-121 439.9 456 48.5
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 6.6e-121 438.7 473 47.8
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 8.6e-121 438.3 468 47.0
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.5e-120 437.6 487 46.8
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 5.6e-120 435.6 444 48.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 9.6e-120 434.9 466 46.1
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.2e-119 434.5 458 47.4
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.6e-119 434.1 500 46.2
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 3.6e-119 433.0 458 46.9
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 3.6e-119 433.0 458 46.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 6.2e-119 432.2 466 45.9
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 6.2e-119 432.2 548 42.3
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.1e-118 431.4 441 47.8
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.4e-118 431.0 497 44.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.8e-118 430.6 500 45.8
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 6.8e-118 428.7 456 48.2
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 6.8e-118 428.7 456 48.2
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.5e-117 427.6 466 46.6
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 4.4e-117 426.0 454 46.7
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 9.9e-117 424.9 464 45.7
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 1.7e-116 424.1 528 44.7
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.4e-115 421.0 553 41.6
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.9e-115 420.6 489 45.2
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 3.2e-115 419.9 448 48.4
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.0e-113 414.8 498 44.4
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.3e-113 413.7 530 42.3
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.8e-111 406.8 509 43.4
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.4e-110 403.7 473 45.2
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 5.3e-110 402.5 479 44.1
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.6e-109 400.2 529 42.5
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.6e-106 391.0 500 44.0
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 2.1e-106 390.6 541 39.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.0e-106 389.0 454 43.6
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.3e-97 361.3 374 50.3
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.3e-97 360.5 375 48.0
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.9e-96 357.5 490 42.0
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 2.0e-93 347.4 490 39.6
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.8e-89 334.3 407 44.7
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.3e-89 334.0 366 45.9
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.1e-81 306.2 309 49.2
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 6.9e-78 295.8 466 36.1
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.4e-73 281.6 423 37.4
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.1e-66 257.7 310 43.9
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 1.8e-33 148.3 445 23.6
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 3.9e-28 130.6 382 29.1
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 3.3e-27 127.5 138 45.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 5.6e-27 126.7 140 46.4
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 2.8e-26 124.4 136 41.9
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 4.0e-25 120.6 241 34.4
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 6.4e-23 113.2 110 54.5
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.4e-14 84.7 68 57.4
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 1.6e-13 82.0 471 22.5
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 5.6e-11 73.6 94 40.4
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 2.1e-10 71.6 113 38.1
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 3.6e-10 70.9 193 26.9
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.1e-09 69.3 80 43.8
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 7.6e-08 63.2 120 36.7
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 2.9e-07 61.2 220 24.5
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.8e-07 60.8 218 24.3


User provided reference genes

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