Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 7.8e-172 607.1 314 100.0
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.0e-144 513.8 314 83.4
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.6e-108 396.7 315 61.9
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 8.3e-105 384.4 322 59.3
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.0e-87 325.1 316 50.6
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.0e-86 324.3 316 50.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.6e-84 315.8 314 47.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 6.8e-83 311.6 315 47.9
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 8.9e-83 311.2 315 48.3
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 8.9e-83 311.2 315 49.2
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.2e-82 310.8 315 48.9
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 4.4e-82 308.9 315 48.9
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.4e-82 308.9 315 48.3
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 7.5e-82 308.1 314 47.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 9.8e-82 307.8 302 49.3
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.3e-81 307.4 315 47.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.7e-81 307.0 314 47.5
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 2.2e-81 306.6 315 49.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 4.9e-81 305.4 315 47.3
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 8.3e-81 304.7 314 47.1
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 8.3e-81 304.7 315 48.9
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.1e-80 304.3 316 47.5
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.4e-80 303.9 305 51.1
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.9e-80 303.5 314 48.1
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.9e-80 303.5 313 47.9
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.9e-80 303.5 313 47.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.4e-80 303.1 312 48.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 3.2e-80 302.8 313 49.2
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.1e-80 301.6 317 47.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 7.1e-80 301.6 314 47.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 9.2e-80 301.2 314 45.9
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 9.2e-80 301.2 314 45.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 9.2e-80 301.2 315 47.3
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.2e-79 300.8 314 45.5
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.2e-79 300.8 315 47.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.6e-79 300.4 313 47.6
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 2.1e-79 300.1 315 46.7
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.7e-79 299.7 322 47.8
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 3.5e-79 299.3 314 45.2
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 6.0e-79 298.5 314 45.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 6.0e-79 298.5 317 48.3
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 7.8e-79 298.1 311 47.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.8e-79 298.1 302 47.4
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.0e-78 297.7 314 45.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.0e-78 297.7 314 45.2
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.3e-78 297.4 316 46.5
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.3e-78 297.4 314 45.2
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.7e-78 297.0 314 46.5
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.7e-78 297.0 317 48.3
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 2.3e-78 296.6 316 45.9
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 2.3e-78 296.6 317 48.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 2.3e-78 296.6 315 45.4
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.3e-78 296.6 313 49.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.0e-78 296.2 315 47.6
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 3.9e-78 295.8 314 44.9
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.9e-78 295.8 313 46.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 5.1e-78 295.4 312 47.1
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 5.1e-78 295.4 285 49.5
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 5.1e-78 295.4 315 45.1
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.5e-77 293.9 317 46.1
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.9e-77 293.5 320 44.7
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.9e-77 293.5 313 49.2
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 4.3e-77 292.4 316 44.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 5.6e-77 292.0 315 45.7
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 7.3e-77 291.6 317 47.3
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.2e-76 290.8 317 46.1
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.2e-76 290.8 311 48.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 6.2e-76 288.5 290 46.6
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.1e-75 287.7 283 49.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.1e-75 287.7 301 47.8
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.8e-75 287.0 321 45.2
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 8.9e-75 284.6 309 46.9
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 4.4e-74 282.3 315 46.3
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 4.9e-73 278.9 314 44.9
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 8.4e-73 278.1 294 50.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.4e-72 277.3 317 46.7
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 5.4e-72 275.4 294 46.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 9.2e-72 274.6 357 42.0
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.0e-70 269.6 315 43.8
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.9e-70 269.2 268 51.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.1e-70 268.9 269 48.7
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.1e-68 263.5 316 42.7
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.8e-68 263.1 316 43.4
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.4e-67 260.8 334 42.5
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.4e-67 260.0 312 44.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 5.8e-66 255.4 298 44.0
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 7.6e-66 255.0 309 43.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.9e-64 250.4 314 43.0
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.3e-60 237.7 317 42.9
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.3e-60 237.7 244 46.7
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.1e-60 236.9 254 46.1
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-58 231.1 335 39.4
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 2.0e-58 230.3 338 37.9
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.4e-58 229.6 240 45.4
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.4e-56 223.4 239 46.0
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.3e-54 217.6 186 54.3
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.1e-54 215.7 249 45.4
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.1e-54 215.7 249 45.4
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.8e-46 190.7 238 45.0
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 6.7e-46 188.7 178 52.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.1e-45 188.0 202 48.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.5e-45 187.6 189 47.6
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 7.1e-40 168.7 178 45.5
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 4.8e-28 129.4 147 40.8
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 5.9e-26 122.5 210 37.6
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.9e-24 117.5 241 33.6
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.2e-24 115.5 103 54.4
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.7e-23 113.6 128 43.8
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 5.1e-22 109.4 129 40.3
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 6.5e-17 92.4 96 45.8
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.6e-15 87.8 76 56.6
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.0e-14 83.6 93 43.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.6e-13 80.5 88 39.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 3.2e-08 63.5 70 44.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-07 60.5 72 41.7


User provided reference genes

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