Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_28760 Physcomitrium patens HOM05D002369 ORTHO05D002435 1.5e-71 272.7 136 100.0
Pp3c11_980 Physcomitrium patens HOM05D002369 ORTHO05D002435 4.2e-21 105.1 86 61.6
AagrBONN_evm.TU.Sc2ySwM_362.2112 Anthoceros agrestis HOM05D002369 ORTHO05D002435 5.5e-13 78.2 120 39.2
SEGI_16021 Sequoiadendron giganteum HOM05D002369 ORTHO05D002435 2.8e-09 65.9 90 38.9
GSVIVG01018076001 Vitis vinifera HOM05D002369 ORTHO05D002435 6.3e-09 64.7 97 37.1
Mapoly0073s0064 Marchantia polymorpha HOM05D002369 ORTHO05D002435 8.2e-09 64.3 130 33.8
Rhsim04G0195900 Rhododendron simsii HOM05D002369 ORTHO05D002435 1.8e-08 63.2 86 39.5
Peaxi162Scf00788g00012 Petunia axillaris HOM05D002369 ORTHO05D002435 3.1e-08 62.4 103 36.9
Actinidia08457 Actinidia chinensis HOM05D002369 ORTHO05D002435 5.3e-08 61.6 88 38.6
Nn1g02504 Nelumbo nucifera HOM05D002369 ORTHO05D002435 5.3e-08 61.6 103 33.0
TWI53G0837 Tripterygium wilfordii HOM05D002369 ORTHO05D002435 5.3e-08 61.6 103 35.0
Cc03_g04470 Coffea canephora HOM05D002369 ORTHO05D002435 9.1e-08 60.8 84 39.3
CiPaw.01G193600 Carya illinoinensis HOM05D002369 ORTHO05D002435 1.5e-07 60.1 86 39.5
Solyc09g082940.3 Solanum lycopersicum HOM05D002369 ORTHO05D002435 2.0e-07 59.7 88 39.8
Sopen09g031810 Solanum pennellii HOM05D002369 ORTHO05D002435 2.0e-07 59.7 88 39.8
PGSC0003DMG400006078 Solanum tuberosum HOM05D002369 ORTHO05D002435 2.0e-07 59.7 88 39.8
CSS0011418 Camellia sinensis var. sinensis HOM05D002369 ORTHO05D002435 2.6e-07 59.3 86 38.4
CAN.G749.11 Capsicum annuum HOM05D002369 ORTHO05D002435 2.6e-07 59.3 88 38.6
FAN17G0856 Fragaria x ananassa HOM05D002369 ORTHO05D002435 2.6e-07 59.3 86 38.4
Gohir.A10G117266 Gossypium hirsutum HOM05D002369 ORTHO05D002435 3.4e-07 58.9 107 36.4
Oeu043467.1 Olea europaea HOM05D002369 ORTHO05D002435 3.4e-07 58.9 88 37.5
Dinv44599 Davidia involucrata HOM05D002369 ORTHO05D002435 4.5e-07 58.5 85 38.8
Phvul.007G111000 Phaseolus vulgaris HOM05D002369 ORTHO05D002435 4.5e-07 58.5 92 37.0
MSTRG.9944 Avicennia marina HOM05D002369 ORTHO05D002435 5.9e-07 58.2 88 36.4
HanXRQChr13g0423531 Helianthus annuus HOM05D002369 ORTHO05D002435 5.9e-07 58.2 83 39.8
Lj5g0017731 Lotus japonicus HOM05D002369 ORTHO05D002435 5.9e-07 58.2 84 35.7
Manes.03G171400 Manihot esculenta HOM05D002369 ORTHO05D002435 5.9e-07 58.2 84 38.1
RcHm_v2.0_Chr4g0388841 Rosa chinensis HOM05D002369 ORTHO05D002435 5.9e-07 58.2 86 38.4
Glyma.10G178700 Glycine max HOM05D002369 ORTHO05D002435 7.7e-07 57.8 92 37.0
Thecc.04G241600 Theobroma cacao HOM05D002369 ORTHO05D002435 7.7e-07 57.8 86 38.4
Actinidia18524 Actinidia chinensis HOM05D002369 ORTHO05D002435 1.0e-06 57.4 88 34.1
ATR0665G333 Amborella trichopoda HOM05D002369 ORTHO05D002435 1.0e-06 57.4 88 34.1
TWI09G0544 Tripterygium wilfordii HOM05D002369 ORTHO05D002435 1.0e-06 57.4 99 34.3
MSTRG.4075 Avicennia marina HOM05D002369 ORTHO05D002435 1.3e-06 57.0 91 37.4
DCAR_002359 Daucus carota HOM05D002369 ORTHO05D002435 1.3e-06 57.0 79 40.5
ECA240G0675 Erigeron canadensis HOM05D002369 ORTHO05D002435 1.3e-06 57.0 73 41.1
Glyma.20G211400 Glycine max HOM05D002369 ORTHO05D002435 1.3e-06 57.0 92 37.0
FAN22G2026 Fragaria x ananassa HOM05D002369 ORTHO05D002435 1.7e-06 56.6 86 37.2
Gohir.D10G150000 Gossypium hirsutum HOM05D002369 ORTHO05D002435 1.7e-06 56.6 86 38.4
Lj5g0000230 Lotus japonicus HOM05D002369 ORTHO05D002435 1.7e-06 56.6 84 36.9
Nitab4.5_0000941g0110 Nicotiana tabacum HOM05D002369 ORTHO05D002435 1.7e-06 56.6 88 37.5
Actinidia40105 Actinidia chinensis HOM05D002369 ORTHO05D002435 2.2e-06 56.2 86 34.9
Migut.G00406 Erythranthe guttata HOM05D002369 ORTHO05D002435 2.2e-06 56.2 86 34.9
FvH4_4g01800 Fragaria vesca HOM05D002369 ORTHO05D002435 2.2e-06 56.2 86 37.2
MD16G1202400 Malus domestica HOM05D002369 ORTHO05D002435 2.2e-06 56.2 86 37.2
vmacro15392 Vaccinium macrocarpon HOM05D002369 ORTHO05D002435 2.2e-06 56.2 87 35.6
arahy.Tifrunner.gnm1.ann1.D98VB5 Arachis hypogaea HOM05D002369 ORTHO05D002435 2.9e-06 55.8 86 36.0
Duzib052G0941 Durio zibethinus HOM05D002369 ORTHO05D002435 2.9e-06 55.8 100 34.0
Duzib212G0042 Durio zibethinus HOM05D002369 ORTHO05D002435 2.9e-06 55.8 95 34.7
Eucgr.H03396 Eucalyptus grandis HOM05D002369 ORTHO05D002435 2.9e-06 55.8 85 37.6
TAR549G0004 Trochodendron aralioides HOM05D002369 ORTHO05D002435 2.9e-06 55.8 103 34.0
Aqoxy2G03486 Aquilegia oxysepala HOM05D002369 ORTHO05D002435 3.8e-06 55.5 86 38.4
BraA01t03343Z Brassica rapa HOM05D002369 ORTHO05D002435 3.8e-06 55.5 76 38.2
Medtr1g076640 Medicago truncatula HOM05D002369 ORTHO05D002435 3.8e-06 55.5 86 37.2
Prupe.1G024000 Prunus persica HOM05D002369 ORTHO05D002435 3.8e-06 55.5 86 37.2
EL10Ac3g06275 Beta vulgaris HOM05D002369 ORTHO05D002435 5.0e-06 55.1 81 38.3
FAN20G0999 Fragaria x ananassa HOM05D002369 ORTHO05D002435 5.0e-06 55.1 76 36.8
PSO210G4121 Papaver somniferum HOM05D002369 ORTHO05D002435 5.0e-06 55.1 86 34.9
Potri.015G142500 Populus trichocarpa HOM05D002369 ORTHO05D002435 5.0e-06 55.1 86 37.2
AL3G37320 Arabidopsis lyrata HOM05D002369 ORTHO05D002435 6.5e-06 54.7 76 38.2
BcaB04g20484 Brassica carinata HOM05D002369 ORTHO05D002435 6.5e-06 54.7 80 37.5
BcaC09g49225 Brassica carinata HOM05D002369 ORTHO05D002435 6.5e-06 54.7 76 38.2
BcaC09g49226 Brassica carinata HOM05D002369 ORTHO05D002435 6.5e-06 54.7 76 38.2
C01p41210 Brassica napus HOM05D002369 ORTHO05D002435 6.5e-06 54.7 76 38.2
BolC1t04075H Brassica oleracea HOM05D002369 ORTHO05D002435 6.5e-06 54.7 76 38.2
CANSAT78G0524 Cannabis sativa HOM05D002369 ORTHO05D002435 6.5e-06 54.7 86 36.0
MD13G1202200 Malus domestica HOM05D002369 ORTHO05D002435 6.5e-06 54.7 86 36.0
Oeu002907.1 Olea europaea HOM05D002369 ORTHO05D002435 6.5e-06 54.7 88 36.4
Sabra15G0152500 Salix brachista HOM05D002369 ORTHO05D002435 6.5e-06 54.7 82 36.6
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 6.5e-06 54.7 82 40.2
Gohir.A09G220600 Gossypium hirsutum HOM05D002369 ORTHO05D002435 8.5e-06 54.3 79 38.0
Gohir.D09G222900 Gossypium hirsutum HOM05D002369 ORTHO05D002435 8.5e-06 54.3 79 38.0
Gorai.006G244200 Gossypium raimondii HOM05D002369 ORTHO05D002435 8.5e-06 54.3 79 38.0
Hund20657 Selenicereus undatus HOM05D002369 ORTHO05D002435 8.5e-06 54.3 79 38.0


User provided reference genes

Program Settings