Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_27120 Physcomitrium patens HOM05D007144 ORTHO05D008709 1.1e-42 177.2 167 100.0
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 2.2e-08 63.2 63 55.6
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 1.5e-07 60.5 44 63.6
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 5.5e-07 58.5 56 55.4
MCO14G389 Micromonas commoda HOM05D007144 ORTHO05D008709 5.5e-07 58.5 43 65.1
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 9.4e-07 57.8 43 65.1
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.2e-06 57.4 63 46.0
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.2e-06 57.4 63 46.0
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 2.1e-06 56.6 47 61.7
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 2.7e-06 56.2 43 58.1
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 2.7e-06 56.2 47 59.6
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 2.7e-06 56.2 43 58.1
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 2.7e-06 56.2 43 58.1
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.7e-06 56.2 43 60.5
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 2.7e-06 56.2 43 58.1
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 2.7e-06 56.2 47 55.3
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 3.6e-06 55.8 47 59.6
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 6.1e-06 55.1 43 55.8
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 6.1e-06 55.1 43 55.8
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 6.1e-06 55.1 52 53.8
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 6.1e-06 55.1 47 59.6
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 8.0e-06 54.7 43 55.8
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 8.0e-06 54.7 43 58.1
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 8.0e-06 54.7 47 57.4
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 8.0e-06 54.7 43 58.1
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 8.0e-06 54.7 53 50.9
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 8.0e-06 54.7 47 57.4


User provided reference genes

Program Settings