Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_26700 Physcomitrium patens HOM05D005519 ORTHO05D006423 1.3e-66 256.5 160 100.0
AagrBONN_evm.TU.Sc2ySwM_117.629 Anthoceros agrestis HOM05D005519 ORTHO05D006423 1.2e-14 84.0 117 59.8
Mapoly0065s0010 Marchantia polymorpha HOM05D005519 ORTHO05D006423 4.9e-13 78.6 48 79.2
SMO139G0065 Selaginella moellendorffii HOM05D005519 ORTHO05D006423 1.0e-10 70.9 139 46.0
CBR_g32244 Chara braunii HOM05D005519 ORTHO05D006423 1.1e-09 67.4 62 54.8
Lalb_Chr19g0130091 Lupinus albus HOM05D005519 ORTHO05D006423 1.9e-09 66.6 132 35.6
Potri.002G065000 Populus trichocarpa HOM05D005519 ORTHO05D006423 3.3e-09 65.9 107 57.0
vmacro01488 Vaccinium macrocarpon HOM05D005519 ORTHO05D006423 5.7e-09 65.1 142 43.0
Cre06.g251150 Chlamydomonas reinhardtii HOM05D005519 ORTHO05D006423 2.8e-08 62.8 51 54.9
Gohir.A05G246000 Gossypium hirsutum HOM05D005519 ORTHO05D006423 2.8e-08 62.8 129 49.6
Lsat_1_v5_gn_6_101660 Lactuca sativa HOM05D005519 ORTHO05D006423 2.8e-08 62.8 132 44.7
TPR.G17016 Trifolium pratense HOM05D005519 ORTHO05D006423 2.8e-08 62.8 135 45.9
TWI32G0061 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 2.8e-08 62.8 117 36.8
HPP92_000679 Vanilla planifolia HOM05D005519 ORTHO05D006423 2.8e-08 62.8 112 47.3
CDE04G2354 Ceratophyllum demersum HOM05D005519 ORTHO05D006423 3.7e-08 62.4 130 43.8
CiPaw.15G012900 Carya illinoinensis HOM05D005519 ORTHO05D006423 8.2e-08 61.2 106 45.3
Glyma.02G079400 Glycine max HOM05D005519 ORTHO05D006423 8.2e-08 61.2 130 36.9
Sc26g0002910 Simmondsia chinensis HOM05D005519 ORTHO05D006423 8.2e-08 61.2 133 48.1
arahy.Tifrunner.gnm1.ann1.8F5AL7 Arachis hypogaea HOM05D005519 ORTHO05D006423 1.1e-07 60.8 113 46.0
arahy.Tifrunner.gnm1.ann1.SKG6R6 Arachis hypogaea HOM05D005519 ORTHO05D006423 1.1e-07 60.8 113 46.0
Duzib093G1843 Durio zibethinus HOM05D005519 ORTHO05D006423 1.1e-07 60.8 131 50.4
Duzib116G0927 Durio zibethinus HOM05D005519 ORTHO05D006423 1.1e-07 60.8 136 40.4
ATR0580G316 Amborella trichopoda HOM05D005519 ORTHO05D006423 1.4e-07 60.5 137 48.2
PSO541G5828 Papaver somniferum HOM05D005519 ORTHO05D006423 1.4e-07 60.5 120 39.2
Phvul.004G091300 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 1.4e-07 60.5 106 36.8
BcaB04g17909 Brassica carinata HOM05D005519 ORTHO05D006423 1.8e-07 60.1 132 48.5
Peaxi162Scf00160g01746 Petunia axillaris HOM05D005519 ORTHO05D006423 1.8e-07 60.1 110 45.5
DCAR_001160 Daucus carota HOM05D005519 ORTHO05D006423 2.4e-07 59.7 130 41.5
Thhalv10008704m.g Eutrema salsugineum HOM05D005519 ORTHO05D006423 2.4e-07 59.7 109 55.0
Manes.18G094400 Manihot esculenta HOM05D005519 ORTHO05D006423 2.4e-07 59.7 106 54.7
PSO675G0400 Papaver somniferum HOM05D005519 ORTHO05D006423 2.4e-07 59.7 107 53.3
QL02p037831 Quercus lobata HOM05D005519 ORTHO05D006423 2.4e-07 59.7 114 41.2
Sopen12g029280 Solanum pennellii HOM05D005519 ORTHO05D006423 2.4e-07 59.7 110 37.3
Actinidia17771 Actinidia chinensis HOM05D005519 ORTHO05D006423 3.1e-07 59.3 111 38.7
Cpa.g.sc49.79 Carica papaya HOM05D005519 ORTHO05D006423 3.1e-07 59.3 109 51.4
Gohir.D05G247500 Gossypium hirsutum HOM05D005519 ORTHO05D006423 3.1e-07 59.3 135 48.9
Lalb_Chr03g0035541 Lupinus albus HOM05D005519 ORTHO05D006423 3.1e-07 59.3 134 34.3
Manes.02G182800 Manihot esculenta HOM05D005519 ORTHO05D006423 3.1e-07 59.3 106 53.8
Ca_10667_v3 Cicer arietinum L. HOM05D005519 ORTHO05D006423 4.1e-07 58.9 107 39.3
Hma1.2p1_0358F.1_g134710 Hydrangea macrophylla HOM05D005519 ORTHO05D006423 4.1e-07 58.9 114 44.7
Lsat_1_v5_gn_9_42101 Lactuca sativa HOM05D005519 ORTHO05D006423 4.1e-07 58.9 134 44.0
Nn1g06007 Nelumbo nucifera HOM05D005519 ORTHO05D006423 4.1e-07 58.9 114 54.4
Nn5g28816 Nelumbo nucifera HOM05D005519 ORTHO05D006423 4.1e-07 58.9 149 43.6
C06p12090 Brassica napus HOM05D005519 ORTHO05D006423 5.3e-07 58.5 129 49.6
Glyma.16G163800 Glycine max HOM05D005519 ORTHO05D006423 5.3e-07 58.5 130 34.6
Psat6g190880 Pisum sativum HOM05D005519 ORTHO05D006423 5.3e-07 58.5 107 40.2
Potri.005G196100 Populus trichocarpa HOM05D005519 ORTHO05D006423 5.3e-07 58.5 106 53.8
A08p08390 Brassica napus HOM05D005519 ORTHO05D006423 6.9e-07 58.2 131 50.4
BraA08t32855Z Brassica rapa HOM05D005519 ORTHO05D006423 6.9e-07 58.2 131 50.4
Dinv41044 Davidia involucrata HOM05D005519 ORTHO05D006423 6.9e-07 58.2 115 53.0
Gorai.005G077500 Gossypium raimondii HOM05D005519 ORTHO05D006423 6.9e-07 58.2 106 53.8
Gorai.009G258300 Gossypium raimondii HOM05D005519 ORTHO05D006423 6.9e-07 58.2 135 49.6
Solyc12g056620.2 Solanum lycopersicum HOM05D005519 ORTHO05D006423 6.9e-07 58.2 110 37.3
VMungo0464G1678 Vigna mungo HOM05D005519 ORTHO05D006423 6.9e-07 58.2 108 53.7
Aa31LG6G8220 Aethionema arabicum HOM05D005519 ORTHO05D006423 9.0e-07 57.8 140 47.9
BcaC08g43825 Brassica carinata HOM05D005519 ORTHO05D006423 1.2e-06 57.4 129 44.2
BolC6t36346H Brassica oleracea HOM05D005519 ORTHO05D006423 1.2e-06 57.4 129 44.2
FAN27G0467 Fragaria x ananassa HOM05D005519 ORTHO05D006423 1.2e-06 57.4 109 49.5
A09p32470 Brassica napus HOM05D005519 ORTHO05D006423 1.5e-06 57.0 130 49.2
Medtr1g098280 Medicago truncatula HOM05D005519 ORTHO05D006423 1.5e-06 57.0 130 44.6
QL02p038173 Quercus lobata HOM05D005519 ORTHO05D006423 1.5e-06 57.0 114 43.0
Sp1g29260 Schrenkiella parvula HOM05D005519 ORTHO05D006423 1.5e-06 57.0 108 50.9
Sed0015682 Sechium edule HOM05D005519 ORTHO05D006423 1.5e-06 57.0 106 46.2
Sopen04g027910 Solanum pennellii HOM05D005519 ORTHO05D006423 1.5e-06 57.0 134 40.3
BolC8t47881H Brassica oleracea HOM05D005519 ORTHO05D006423 2.0e-06 56.6 130 49.2
Cfa018287 Carpinus fangiana HOM05D005519 ORTHO05D006423 2.0e-06 56.6 107 42.1
FvH4_2g13070 Fragaria vesca HOM05D005519 ORTHO05D006423 2.0e-06 56.6 108 50.0
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.0e-06 56.6 108 50.0
PGSC0003DMG400025068 Solanum tuberosum HOM05D005519 ORTHO05D006423 2.0e-06 56.6 110 46.4
MSTRG.25301 Avicennia marina HOM05D005519 ORTHO05D006423 2.6e-06 56.2 106 51.9
Glyma.20G169500 Glycine max HOM05D005519 ORTHO05D006423 2.6e-06 56.2 133 33.8
Prupe.8G039900 Prunus persica HOM05D005519 ORTHO05D006423 2.6e-06 56.2 115 47.8
BraA09t38789Z Brassica rapa HOM05D005519 ORTHO05D006423 3.4e-06 55.8 129 48.1
CANSAT25G1666 Cannabis sativa HOM05D005519 ORTHO05D006423 3.4e-06 55.8 112 38.4
Dinv25895 Davidia involucrata HOM05D005519 ORTHO05D006423 3.4e-06 55.8 113 48.7
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 3.4e-06 55.8 108 50.0
MCO05G699 Micromonas commoda HOM05D005519 ORTHO05D006423 3.4e-06 55.8 48 47.9
Nitab4.5_0001103g0040 Nicotiana tabacum HOM05D005519 ORTHO05D006423 3.4e-06 55.8 110 43.6
RcHm_v2.0_Chr6g0274331 Rosa chinensis HOM05D005519 ORTHO05D006423 3.4e-06 55.8 108 50.0
SGA_v2.0_scaffold108G30869 Striga asiatica HOM05D005519 ORTHO05D006423 3.4e-06 55.8 106 50.9
Zm00001eb160790 Zea mays HOM05D005519 ORTHO05D006423 3.4e-06 55.8 127 44.1
MD05G1032800 Malus domestica HOM05D005519 ORTHO05D006423 4.5e-06 55.5 106 50.0
Phvul.007G083000 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 4.5e-06 55.5 106 36.8
Thecc.08G158600 Theobroma cacao HOM05D005519 ORTHO05D006423 4.5e-06 55.5 106 50.9
TAR381G0167 Trochodendron aralioides HOM05D005519 ORTHO05D006423 4.5e-06 55.5 139 37.4
Glyma.10G222100 Glycine max HOM05D005519 ORTHO05D006423 5.9e-06 55.1 144 34.0
PGSC0003DMG400018793 Solanum tuberosum HOM05D005519 ORTHO05D006423 5.9e-06 55.1 107 38.3
AL1G48440 Arabidopsis lyrata HOM05D005519 ORTHO05D006423 7.7e-06 54.7 109 45.0
AT1G34000 Arabidopsis thaliana HOM05D005519 ORTHO05D006423 7.7e-06 54.7 109 45.9
CAN.G26.8 Capsicum annuum HOM05D005519 ORTHO05D006423 7.7e-06 54.7 130 44.6
ClCG08G008840 Citrullus lanatus HOM05D005519 ORTHO05D006423 7.7e-06 54.7 107 52.3
Solyc04g071930.4 Solanum lycopersicum HOM05D005519 ORTHO05D006423 7.7e-06 54.7 110 47.3
BcaB07g33022 Brassica carinata HOM05D005519 ORTHO05D006423 1.0e-05 54.3 133 45.9
Migut.C00964 Erythranthe guttata HOM05D005519 ORTHO05D006423 1.0e-05 54.3 136 41.2
Lj5g0019555 Lotus japonicus HOM05D005519 ORTHO05D006423 1.0e-05 54.3 108 48.1
Peaxi162Scf00360g00028 Petunia axillaris HOM05D005519 ORTHO05D006423 1.0e-05 54.3 110 50.0


User provided reference genes

Program Settings