Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_22470 Physcomitrium patens HOM05D005925 ORTHO05D007270 1.2e-163 579.7 278 100.0
Pp3c2_22478 Physcomitrium patens HOM05D005925 ORTHO05D007270 1.2e-163 579.7 278 100.0
TAR628G0202 Trochodendron aralioides HOM05D005925 ORTHO05D007270 1.5e-73 280.4 282 49.3
Gohir.D02G235800 Gossypium hirsutum HOM05D005925 ORTHO05D007270 4.3e-73 278.9 283 50.9
GSVIVG01031883001 Vitis vinifera HOM05D005925 ORTHO05D007270 5.7e-73 278.5 284 49.6
Gorai.005G263900 Gossypium raimondii HOM05D005925 ORTHO05D007270 9.7e-73 277.7 283 50.9
FvH4_5g27360 Fragaria vesca HOM05D005925 ORTHO05D007270 2.2e-72 276.6 283 50.2
Gohir.A03G214300 Gossypium hirsutum HOM05D005925 ORTHO05D007270 1.1e-71 274.2 283 50.5
MD10G1085900 Malus domestica HOM05D005925 ORTHO05D007270 1.4e-71 273.9 282 48.6
Sc14g0001730 Simmondsia chinensis HOM05D005925 ORTHO05D007270 1.4e-71 273.9 283 48.8
Potri.004G148500 Populus trichocarpa HOM05D005925 ORTHO05D007270 3.1e-71 272.7 281 47.0
Potri.004G148700 Populus trichocarpa HOM05D005925 ORTHO05D007270 4.1e-71 272.3 281 47.0
Duzib248G1621 Durio zibethinus HOM05D005925 ORTHO05D007270 5.3e-71 271.9 283 48.4
Thecc.02G029300 Theobroma cacao HOM05D005925 ORTHO05D007270 6.9e-71 271.6 284 49.3
Manes.17G097200 Manihot esculenta HOM05D005925 ORTHO05D007270 9.0e-71 271.2 282 47.9
PSO170G4903 Papaver somniferum HOM05D005925 ORTHO05D007270 9.0e-71 271.2 283 48.4
TPR.G10224 Trifolium pratense HOM05D005925 ORTHO05D007270 9.0e-71 271.2 281 48.0
ATR0733G151 Amborella trichopoda HOM05D005925 ORTHO05D007270 1.2e-70 270.8 286 50.3
Lj3g0007485 Lotus japonicus HOM05D005925 ORTHO05D007270 1.2e-70 270.8 285 49.1
CDE01G0621 Ceratophyllum demersum HOM05D005925 ORTHO05D007270 1.5e-70 270.4 281 49.1
vmacro22671 Vaccinium macrocarpon HOM05D005925 ORTHO05D007270 1.5e-70 270.4 283 48.8
VMungo1127G2028 Vigna mungo HOM05D005925 ORTHO05D007270 1.5e-70 270.4 282 48.9
Psat7g207080 Pisum sativum HOM05D005925 ORTHO05D007270 3.4e-70 269.2 281 47.3
PGR142G0964 Punica granatum HOM05D005925 ORTHO05D007270 3.4e-70 269.2 281 47.0
Medtr4g068475 Medicago truncatula HOM05D005925 ORTHO05D007270 4.5e-70 268.9 281 48.0
RcHm_v2.0_Chr6g0261021 Rosa chinensis HOM05D005925 ORTHO05D007270 4.5e-70 268.9 282 47.9
Ciclev10029009m.g Citrus clementina HOM05D005925 ORTHO05D007270 1.0e-69 267.7 282 48.2
PSO700G0338 Papaver somniferum HOM05D005925 ORTHO05D007270 1.0e-69 267.7 283 48.1
Hund00298 Selenicereus undatus HOM05D005925 ORTHO05D007270 1.0e-69 267.7 282 48.9
Hund00305 Selenicereus undatus HOM05D005925 ORTHO05D007270 1.0e-69 267.7 282 48.9
CiPaw.05G059200 Carya illinoinensis HOM05D005925 ORTHO05D007270 1.7e-69 266.9 282 46.5
Phvul.011G049700 Phaseolus vulgaris HOM05D005925 ORTHO05D007270 2.2e-69 266.5 281 47.7
Prupe.8G110200 Prunus persica HOM05D005925 ORTHO05D007270 2.9e-69 266.2 285 47.7
Ca_20823_v3 Cicer arietinum L. HOM05D005925 ORTHO05D007270 3.8e-69 265.8 281 47.7
Eucgr.I01229 Eucalyptus grandis HOM05D005925 ORTHO05D007270 3.8e-69 265.8 281 47.3
Solyc01g109130.3 Solanum lycopersicum HOM05D005925 ORTHO05D007270 3.8e-69 265.8 276 46.7
Sopen01g051330 Solanum pennellii HOM05D005925 ORTHO05D007270 3.8e-69 265.8 276 46.7
Glyma.11G122900 Glycine max HOM05D005925 ORTHO05D007270 5.0e-69 265.4 281 47.0
Cfa004956 Carpinus fangiana HOM05D005925 ORTHO05D007270 6.5e-69 265.0 282 47.5
DCAR_003633 Daucus carota HOM05D005925 ORTHO05D007270 6.5e-69 265.0 285 46.7
FAN04G2258 Fragaria x ananassa HOM05D005925 ORTHO05D007270 8.5e-69 264.6 294 48.0
Oeu034077.1 Olea europaea HOM05D005925 ORTHO05D007270 8.5e-69 264.6 283 47.7
Ah.01g019810 Amaranthus hybridus HOM05D005925 ORTHO05D007270 1.1e-68 264.2 281 47.0
arahy.Tifrunner.gnm1.ann1.JZQ5CR Arachis hypogaea HOM05D005925 ORTHO05D007270 1.1e-68 264.2 281 48.0
Lalb_Chr01g0002931 Lupinus albus HOM05D005925 ORTHO05D007270 1.1e-68 264.2 281 47.0
arahy.Tifrunner.gnm1.ann1.EU6551 Arachis hypogaea HOM05D005925 ORTHO05D007270 1.4e-68 263.8 281 47.7
COL.COLO4_17783 Corchorus olitorius HOM05D005925 ORTHO05D007270 1.4e-68 263.8 262 51.1
Peaxi162Scf00016g01229 Petunia axillaris HOM05D005925 ORTHO05D007270 1.4e-68 263.8 277 46.6
TWI31G0896 Tripterygium wilfordii HOM05D005925 ORTHO05D007270 1.4e-68 263.8 289 47.8
FAN08G3356 Fragaria x ananassa HOM05D005925 ORTHO05D007270 3.2e-68 262.7 294 47.6
Glyma.12G047700 Glycine max HOM05D005925 ORTHO05D007270 5.5e-68 261.9 281 47.3
QL11p039405 Quercus lobata HOM05D005925 ORTHO05D007270 5.5e-68 261.9 283 46.3
HanXRQChr10g0307581 Helianthus annuus HOM05D005925 ORTHO05D007270 7.2e-68 261.5 282 47.2
Rhsim05G0078300 Rhododendron simsii HOM05D005925 ORTHO05D007270 7.2e-68 261.5 282 46.5
Nitab4.5_0012894g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 1.6e-67 260.4 287 46.3
CAN.G322.90 Capsicum annuum HOM05D005925 ORTHO05D007270 2.1e-67 260.0 276 45.7
Cc02_g18140 Coffea canephora HOM05D005925 ORTHO05D007270 2.7e-67 259.6 266 46.2
Migut.N01222 Erythranthe guttata HOM05D005925 ORTHO05D007270 4.6e-67 258.8 278 47.5
SGA_v2.0_scaffold55G19820 Striga asiatica HOM05D005925 ORTHO05D007270 4.6e-67 258.8 278 48.9
Actinidia17837 Actinidia chinensis HOM05D005925 ORTHO05D007270 6.1e-67 258.5 282 46.1
Lsat_1_v5_gn_5_117341 Lactuca sativa HOM05D005925 ORTHO05D007270 1.4e-66 257.3 279 47.0
Os03g0766900 Oryza sativa ssp. japonica HOM05D005925 ORTHO05D007270 3.0e-66 256.1 274 47.1
MSTRG.27750 Avicennia marina HOM05D005925 ORTHO05D007270 6.7e-66 255.0 276 47.5
PGSC0003DMG400025833 Solanum tuberosum HOM05D005925 ORTHO05D007270 8.8e-66 254.6 275 45.8
SalBow1G0951 Salvia bowleyana HOM05D005925 ORTHO05D007270 2.0e-65 253.4 278 46.8
THA.LOC104803449 Tarenaya hassleriana HOM05D005925 ORTHO05D007270 2.0e-65 253.4 284 45.4
Aa31LG8G5780 Aethionema arabicum HOM05D005925 ORTHO05D007270 2.5e-65 253.1 284 46.8
A05p30640 Brassica napus HOM05D005925 ORTHO05D007270 2.5e-65 253.1 282 46.8
MELO3C018414.2 Cucumis melo HOM05D005925 ORTHO05D007270 3.3e-65 252.7 281 46.3
CsaV3_7G010150 Cucumis sativus L. HOM05D005925 ORTHO05D007270 3.3e-65 252.7 283 46.3
Sed0018300 Sechium edule HOM05D005925 ORTHO05D007270 3.3e-65 252.7 282 46.1
BcaB06g25946 Brassica carinata HOM05D005925 ORTHO05D007270 7.4e-65 251.5 282 47.2
Thhalv10021280m.g Eutrema salsugineum HOM05D005925 ORTHO05D007270 7.4e-65 251.5 282 45.7
AT3G18940 Arabidopsis thaliana HOM05D005925 ORTHO05D007270 1.7e-64 250.4 282 45.7
Aqoxy5G01754 Aquilegia oxysepala HOM05D005925 ORTHO05D007270 2.2e-64 250.0 281 45.2
SalBow3G3631 Salvia bowleyana HOM05D005925 ORTHO05D007270 2.2e-64 250.0 278 47.1
CANSAT25G2034 Cannabis sativa HOM05D005925 ORTHO05D007270 3.7e-64 249.2 285 45.3
Zm00001eb058630 Zea mays HOM05D005925 ORTHO05D007270 4.8e-64 248.8 264 49.2
ClCG02G005470 Citrullus lanatus HOM05D005925 ORTHO05D007270 6.3e-64 248.4 285 44.6
AL3G32330 Arabidopsis lyrata HOM05D005925 ORTHO05D007270 8.2e-64 248.1 282 45.0
MBI16_g31334_MAGBIO Magnolia biondii HOM05D005925 ORTHO05D007270 8.2e-64 248.1 308 43.5
Sp3g17030 Schrenkiella parvula HOM05D005925 ORTHO05D007270 8.2e-64 248.1 282 45.4
C05p46520 Brassica napus HOM05D005925 ORTHO05D007270 2.4e-63 246.5 282 45.7
CARHR094360 Cardamine hirsuta HOM05D005925 ORTHO05D007270 4.1e-63 245.7 282 44.7
Carub.0003s1876 Capsella rubella HOM05D005925 ORTHO05D007270 5.3e-63 245.4 284 45.1
Mapoly0073s0081 Marchantia polymorpha HOM05D005925 ORTHO05D007270 5.3e-63 245.4 260 50.0
QL09p038983 Quercus lobata HOM05D005925 ORTHO05D007270 5.3e-63 245.4 262 45.8
A03p40910 Brassica napus HOM05D005925 ORTHO05D007270 9.1e-63 244.6 283 44.9
BraA03t13250Z Brassica rapa HOM05D005925 ORTHO05D007270 9.1e-63 244.6 283 44.9
ECA234G0394 Erigeron canadensis HOM05D005925 ORTHO05D000001 3.4e-62 242.7 272 45.2
FAN13G1680 Fragaria x ananassa HOM05D005925 ORTHO05D007270 6.5e-61 238.4 260 48.8
Nn6g32156 Nelumbo nucifera HOM05D005925 ORTHO05D007270 1.1e-60 237.7 248 48.0
AUR62011394 Chenopodium quinoa HOM05D005925 ORTHO05D007270 2.5e-60 236.5 260 48.8
Sabra04G0098600 Salix brachista HOM05D005925 ORTHO05D007270 4.2e-60 235.7 351 36.8
SMO115G0205 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 7.2e-60 235.0 271 43.5
EL10Ac9g21785 Beta vulgaris HOM05D005925 ORTHO05D007270 2.1e-59 233.4 244 49.2
Hma1.2p1_0584F.1_g183295 Hydrangea macrophylla HOM05D005925 ORTHO05D007270 4.7e-59 232.3 243 48.6
Lj9C365T5 Lonicera japonica HOM05D005925 ORTHO05D007270 3.9e-58 229.2 248 46.8
unitig_8.g3429 Utricularia gibba HOM05D005925 ORTHO05D007270 1.2e-54 217.6 260 43.8
RcHm_v2.0_Chr6g0260971 Rosa chinensis HOM05D005925 ORTHO05D007270 4.5e-54 215.7 281 41.3
FAN18G1621 Fragaria x ananassa HOM05D005925 ORTHO05D007270 1.3e-53 214.2 249 47.0
BcaC01g03666 Brassica carinata HOM05D005925 ORTHO05D007270 2.5e-52 209.9 241 46.1
C03p49920 Brassica napus HOM05D005925 ORTHO05D007270 2.5e-52 209.9 241 46.1
BolC3t17285H Brassica oleracea HOM05D005925 ORTHO05D007270 2.5e-52 209.9 241 46.1
SGA_v2.0_scaffold13G06566 Striga asiatica HOM05D005925 ORTHO05D007270 2.5e-52 209.9 262 43.1
BcaB04g19013 Brassica carinata HOM05D005925 ORTHO05D007270 3.2e-52 209.5 261 43.3
FvH4_2g07422 Fragaria vesca HOM05D005925 ORTHO05D007270 1.2e-51 207.6 248 45.6
Haze_02451 Corylus avellana HOM05D005925 ORTHO05D007270 2.3e-50 203.4 263 41.8
Nitab4.5_0008189g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 2.3e-50 203.4 283 39.2
Dinv23574 Davidia involucrata HOM05D005925 ORTHO05D007270 1.3e-48 197.6 206 45.1
Actinidia27921 Actinidia chinensis HOM05D005925 ORTHO05D007270 3.7e-48 196.1 279 40.9
HPP92_015723 Vanilla planifolia HOM05D005925 ORTHO05D007270 2.9e-45 186.4 217 47.5
CBR_g26043 Chara braunii HOM05D005925 ORTHO05D007270 8.0e-43 178.3 339 32.2
Cpa.g.sc62.88 Carica papaya HOM05D005925 ORTHO05D007270 4.0e-42 176.0 187 46.0
AagrBONN_evm.TU.Sc2ySwM_228.3883 Anthoceros agrestis HOM05D005925 ORTHO05D007270 9.7e-41 171.4 179 46.9
FAN15G3711 Fragaria x ananassa HOM05D001143 ORTHO05D001457 1.1e-39 167.9 194 45.4
SEGI_41274 Sequoiadendron giganteum HOM05D005925 ORTHO05D007270 6.5e-37 158.7 152 50.0
FAN24G2811 Fragaria x ananassa HOM05D001143 ORTHO05D007270 8.3e-32 141.7 217 39.6
BolC5t33380H Brassica oleracea HOM05D005925 ORTHO05D007270 8.6e-29 131.7 125 55.2
Atru.chr5.2901 Acer truncatum HOM05D005925 ORTHO05D007270 1.9e-28 130.6 131 50.4
BraA05t21906Z Brassica rapa HOM05D005925 ORTHO05D007270 2.5e-28 130.2 125 54.4
SMO115G0183 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 3.6e-27 126.3 153 41.8
Haze_02453 Corylus avellana HOM05D005925 ORTHO05D007270 6.8e-26 122.1 178 38.2
SEGI_01484 Sequoiadendron giganteum HOM05D005925 ORTHO05D007270 2.0e-25 120.6 96 67.7
MCO11G864 Micromonas commoda HOM05D005925 ORTHO05D007270 9.2e-23 111.7 285 30.9
Atru.chr5.2902 Acer truncatum HOM05D005925 ORTHO05D007270 5.6e-20 102.4 85 51.8
FvH4_5g16250 Fragaria vesca HOM05D005925 ORTHO05D007270 9.5e-20 101.7 106 51.9
FAN18G0119 Fragaria x ananassa HOM05D005925 ORTHO05D007270 1.3e-13 81.3 81 51.9
CDE02G0959 Ceratophyllum demersum HOM05D007402 ORTHO05D003673 3.0e-13 80.1 110 41.8
FAN20G1704 Fragaria x ananassa HOM05D005925 ORTHO05D007270 6.6e-13 79.0 65 53.8
RcHm_v2.0_Chr7g0218511 Rosa chinensis HOM05D005925 ORTHO05D007270 3.3e-12 76.6 134 32.8


User provided reference genes

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