Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 7.7e-169 597.0 298 100.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.0e-56 222.6 189 57.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 5.0e-51 205.7 216 47.2
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 2.5e-50 203.4 218 47.2
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.2e-50 203.0 217 48.4
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 4.2e-50 202.6 212 48.6
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 5.5e-50 202.2 220 49.1
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 5.5e-50 202.2 229 45.9
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.7e-49 199.9 231 43.7
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 4.7e-49 199.1 229 45.0
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.4e-48 197.6 181 54.7
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.8e-48 197.2 213 47.4
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 3.0e-48 196.4 184 50.0
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.2e-47 194.5 247 42.1
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 1.5e-47 194.1 211 46.0
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.5e-47 194.1 215 45.6
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 2.0e-47 193.7 214 46.3
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 2.6e-47 193.4 223 44.4
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.4e-47 192.6 215 46.5
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 4.4e-47 192.6 236 46.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 9.8e-47 191.4 211 45.5
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.3e-46 191.0 211 46.0
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.3e-46 191.0 211 46.0
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.7e-46 190.7 218 44.5
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.7e-46 190.7 205 48.3
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.8e-46 189.1 214 44.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 8.3e-46 188.3 210 45.7
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.1e-45 188.0 218 44.5
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 1.4e-45 187.6 227 44.1
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.8e-45 187.2 216 44.9
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.4e-45 186.8 211 44.5
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.4e-45 186.8 205 47.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 4.1e-45 186.0 211 44.5
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 7.0e-45 185.3 211 44.5
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 7.0e-45 185.3 214 45.3
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 9.1e-45 184.9 204 47.5
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.2e-44 184.5 211 43.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.6e-44 184.1 238 41.2
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 2.7e-44 183.3 215 42.3
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 2.7e-44 183.3 193 49.2
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 2.7e-44 183.3 217 44.2
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 3.5e-44 183.0 223 43.0
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 4.5e-44 182.6 240 43.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.5e-44 182.6 184 48.4
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.0e-43 181.4 213 43.7
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.7e-43 180.6 215 43.3
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 2.2e-43 180.3 210 45.7
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.9e-43 179.9 227 41.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.8e-43 179.5 212 42.9
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 3.8e-43 179.5 218 42.2
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 8.5e-43 178.3 232 42.7
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.1e-42 177.9 211 46.0
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 2.5e-42 176.8 210 44.8
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.5e-42 176.8 213 44.6
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 3.2e-42 176.4 209 42.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 4.2e-42 176.0 238 41.6
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.2e-42 176.0 230 41.3
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 5.5e-42 175.6 216 44.9
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 7.2e-42 175.3 204 44.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.2e-41 174.5 226 41.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.6e-41 174.1 202 43.1
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.6e-41 174.1 234 44.9
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.6e-41 174.1 205 44.9
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.6e-41 172.9 210 42.4
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 6.1e-41 172.2 216 42.1
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 8.0e-41 171.8 214 43.9
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.4e-40 171.0 212 43.9
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.8e-40 170.6 202 44.1
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.8e-40 170.6 212 42.9
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.3e-40 170.2 208 43.3
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 4.0e-40 169.5 250 40.0
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.0e-40 169.5 191 46.6
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 8.8e-40 168.3 208 42.8
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 8.8e-40 168.3 200 44.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-39 167.9 208 42.8
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.2e-39 167.9 220 41.8
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 2.6e-39 166.8 200 43.5
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 3.4e-39 166.4 171 47.4
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 5.7e-39 165.6 220 43.2
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 9.8e-39 164.9 204 44.1
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.3e-38 164.5 203 42.4
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 2.2e-38 163.7 210 41.9
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 6.3e-38 162.2 209 45.5
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 8.3e-38 161.8 208 40.4
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.8e-37 160.6 181 43.6
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.4e-37 160.2 218 42.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 7.0e-37 158.7 180 47.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 2.0e-36 157.1 208 41.8
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 7.7e-36 155.2 175 47.4
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.3e-35 154.5 205 41.5
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.5e-34 150.2 131 52.7
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.2e-32 142.5 177 44.1
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.5e-31 141.0 150 46.0
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 2.6e-31 140.2 181 42.0
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.8e-31 138.3 168 42.3
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.4e-30 135.6 163 41.7
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 2.4e-29 133.7 215 36.7
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 5.4e-29 132.5 130 52.3
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 3.5e-28 129.8 210 36.7
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 5.8e-23 112.5 152 42.1
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.7e-22 109.8 162 38.9
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 3.5e-20 103.2 100 49.0
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.5e-18 97.8 196 31.6
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.3e-18 96.7 147 38.1
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.3e-18 96.3 111 45.0
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.3e-16 90.5 187 29.9
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 6.4e-14 82.4 111 41.4
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 7.1e-13 79.0 60 56.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-11 74.7 70 48.6
PRCOL_00001528 Prasinoderma coloniale HOM05D006411 ORTHO05D007563 1.5e-10 71.2 165 32.7
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.6e-10 69.3 61 52.5
Cre03.g180500 Chlamydomonas reinhardtii HOM05D006411 ORTHO05D007563 1.2e-09 68.2 172 29.7
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.5e-07 61.2 157 32.5
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.5e-07 61.2 63 46.0
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.8e-06 56.6 38 60.5
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 4.9e-06 56.2 74 40.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 8.4e-06 55.5 37 62.2


User provided reference genes

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