Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.1e-130 469.9 240 100.0
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.3e-51 205.3 160 60.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.3e-51 205.3 160 60.0
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 2.6e-42 176.4 157 54.8
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.4e-42 176.0 146 56.8
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.5e-42 175.6 146 56.8
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 5.8e-42 175.3 149 56.4
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 9.9e-42 174.5 147 54.4
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.3e-41 174.1 148 54.7
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.3e-41 174.1 148 54.7
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 2.9e-41 172.9 176 50.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 4.9e-41 172.2 153 53.6
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 8.4e-41 171.4 148 54.1
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.1e-40 171.0 153 53.6
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 1.1e-40 171.0 156 51.9
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.4e-40 170.6 183 47.5
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.4e-40 170.6 149 54.4
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 1.4e-40 170.6 153 53.6
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.4e-40 170.6 148 55.4
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.9e-40 170.2 155 51.0
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 3.2e-40 169.5 163 51.5
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 3.2e-40 169.5 148 54.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 5.5e-40 168.7 157 52.9
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 5.5e-40 168.7 148 53.4
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 7.1e-40 168.3 165 50.9
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.2e-39 167.5 156 48.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 1.2e-39 167.5 163 52.1
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.2e-39 167.5 146 55.5
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 2.1e-39 166.8 148 54.7
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.7e-39 166.4 151 54.3
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 3.5e-39 166.0 162 51.9
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.5e-39 166.0 146 55.5
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 4.6e-39 165.6 157 51.0
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 4.6e-39 165.6 148 52.7
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 7.9e-39 164.9 167 48.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 7.9e-39 164.9 148 52.0
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.3e-38 164.1 173 48.0
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.3e-38 164.1 148 50.7
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 2.3e-38 163.3 148 51.4
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 2.3e-38 163.3 149 53.7
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 2.3e-38 163.3 149 53.0
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 2.3e-38 163.3 148 53.4
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 3.0e-38 162.9 148 50.7
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.9e-38 162.5 147 53.7
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.9e-38 162.5 147 53.7
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 6.7e-38 161.8 204 43.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 8.7e-38 161.4 204 43.1
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 8.7e-38 161.4 204 43.1
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.5e-37 160.6 173 49.1
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.5e-37 160.6 154 51.9
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.9e-37 160.2 149 49.7
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.5e-37 159.8 150 52.7
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 3.3e-37 159.5 157 51.0
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 3.3e-37 159.5 147 53.1
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.3e-37 159.1 166 49.4
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.3e-37 159.1 146 52.7
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 5.6e-37 158.7 148 51.4
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 5.6e-37 158.7 149 52.3
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 9.6e-37 157.9 147 52.4
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.3e-36 157.5 157 49.7
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-36 157.5 157 49.7
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-36 157.5 157 49.7
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.3e-36 157.5 147 52.4
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.3e-36 157.5 199 43.7
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.6e-36 157.1 157 49.7
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.1e-36 156.8 157 49.7
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 2.8e-36 156.4 147 52.4
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.7e-36 156.0 154 51.3
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 4.8e-36 155.6 149 51.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 6.2e-36 155.2 156 46.8
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 6.2e-36 155.2 151 50.3
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 8.2e-36 154.8 148 51.4
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 8.2e-36 154.8 143 50.3
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.1e-35 154.5 149 51.0
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 1.4e-35 154.1 147 51.0
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.4e-35 154.1 158 48.1
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.4e-35 154.1 158 45.6
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.8e-35 153.7 151 51.0
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 3.1e-35 152.9 149 50.3
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 4.0e-35 152.5 160 50.6
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 9.0e-35 151.4 155 49.0
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.3e-33 147.5 149 49.0
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.7e-33 147.1 148 48.6
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 4.9e-33 145.6 182 44.5
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.8e-30 137.1 115 55.7
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 5.1e-30 135.6 158 44.9
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.1e-29 134.4 180 41.7
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.9e-29 133.7 128 50.8
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 4.3e-29 132.5 151 43.7
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 7.4e-29 131.7 157 43.3
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 4.8e-28 129.0 140 47.1
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 4.8e-28 129.0 156 43.6
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 6.3e-28 128.6 126 50.0
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 3.1e-27 126.3 115 50.4
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 8.5e-25 118.2 117 48.7
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.1e-23 112.1 126 46.8
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 5.1e-22 109.0 181 37.6
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 2.2e-17 93.6 147 36.7
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 6.5e-17 92.0 84 52.4
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 1.1e-16 91.3 86 51.2
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 2.3e-14 83.6 149 35.6
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 1.1e-13 81.3 137 34.3
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 3.3e-13 79.7 115 37.4
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 2.2e-12 77.0 59 62.7
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.2e-08 62.0 61 50.8
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.2e-07 61.2 156 29.5


User provided reference genes

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