Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 4.7e-149 531.2 272 100.0
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.9e-45 186.4 245 46.9
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 7.6e-22 108.6 237 34.6
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 4.2e-20 102.8 242 33.1
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.2e-19 101.3 234 32.9
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.1e-19 100.5 242 31.8
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 2.7e-19 100.1 237 31.2
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 2.7e-19 100.1 234 32.5
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.0e-18 98.2 234 31.6
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.0e-18 96.7 254 32.3
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 5.1e-18 95.9 240 30.0
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.5e-17 94.4 264 29.2
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.9e-17 94.0 237 30.8
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.5e-17 93.6 237 32.5
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 4.3e-17 92.8 234 35.0
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 4.3e-17 92.8 246 30.5
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 4.3e-17 92.8 237 31.2
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 5.6e-17 92.4 236 30.1
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 5.6e-17 92.4 257 30.0
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 7.4e-17 92.0 235 31.1
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 9.6e-17 91.7 238 31.5
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 9.6e-17 91.7 235 31.5
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.3e-16 91.3 234 31.2
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.3e-16 91.3 232 29.3
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.3e-16 91.3 243 32.1
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.3e-16 91.3 241 29.0
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.6e-16 90.9 240 30.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.6e-16 90.9 234 32.5
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.6e-16 90.9 234 30.8
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.6e-16 90.9 236 30.1
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.6e-16 90.9 236 30.1
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.1e-16 90.5 235 33.2
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 2.1e-16 90.5 234 31.2
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 2.1e-16 90.5 235 31.9
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 3.6e-16 89.7 234 30.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 4.8e-16 89.4 235 31.1
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 4.8e-16 89.4 237 29.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 6.2e-16 89.0 234 29.5
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 8.1e-16 88.6 234 33.3
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 8.1e-16 88.6 244 28.3
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.1e-15 88.2 237 30.8
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.1e-15 88.2 237 31.6
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.4e-15 87.8 236 30.1
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 2.4e-15 87.0 230 30.4
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.4e-15 87.0 235 33.2
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.1e-15 86.7 234 29.9
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 4.0e-15 86.3 234 30.3
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 5.3e-15 85.9 238 30.7
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 9.0e-15 85.1 245 31.4
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.2e-14 84.7 244 29.9
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.2e-14 84.7 237 30.0
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.5e-14 84.3 239 30.1
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.0e-14 84.0 235 28.9
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.6e-14 83.6 238 29.8
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.6e-14 83.6 238 30.7
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 3.4e-14 83.2 237 29.1
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.4e-14 83.2 232 28.4
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.4e-14 83.2 237 32.1
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 3.4e-14 83.2 234 31.2
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.5e-14 82.8 234 30.3
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.5e-14 82.8 231 30.7
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 5.8e-14 82.4 238 30.3
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 5.8e-14 82.4 236 28.8
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 9.9e-14 81.6 237 30.0
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.3e-13 81.3 248 29.4
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 1.3e-13 81.3 241 29.5
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.7e-13 80.9 233 29.6
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.2e-13 80.5 227 28.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.9e-13 80.1 238 31.1
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 3.8e-13 79.7 236 29.2
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 4.9e-13 79.3 169 30.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 6.4e-13 79.0 243 28.8
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 8.4e-13 78.6 232 27.2
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 1.1e-12 78.2 228 28.1
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.1e-12 78.2 139 34.5
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.1e-12 78.2 243 29.2
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.4e-12 77.8 169 32.5
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.9e-12 77.4 239 27.6
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.9e-12 77.4 232 28.9
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 2.4e-12 77.0 228 27.6
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.4e-12 77.0 244 29.1
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 2.4e-12 77.0 166 31.9
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 3.2e-12 76.6 237 30.0
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 4.2e-12 76.3 143 34.3
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.5e-12 75.9 234 26.5
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.2e-11 74.7 239 28.5
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 2.7e-11 73.6 239 28.5
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 2.7e-11 73.6 173 31.2
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.7e-11 73.6 170 31.8
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.5e-11 73.2 235 25.5
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 3.5e-11 73.2 136 33.8
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 4.6e-11 72.8 238 29.0
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 6.0e-11 72.4 232 27.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.0e-10 71.6 240 25.8
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 6.7e-10 68.9 144 31.9
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 8.7e-10 68.6 177 28.8
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.3e-08 64.7 248 27.4
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.3e-08 64.7 248 27.0
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.1e-08 63.9 105 31.4
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.1e-08 63.9 235 26.8
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 2.8e-08 63.5 236 28.8
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 3.7e-08 63.2 76 42.1
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 8.1e-08 62.0 105 30.5
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.1e-08 62.0 53 52.8
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 3.1e-07 60.1 73 39.7
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 4.0e-07 59.7 140 30.7
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.2e-06 58.2 241 28.2


User provided reference genes

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