Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_10100 Physcomitrium patens HOM05D013579 ORTHO05D003690 7.9e-203 710.3 375 100.0
Pp3c1_28820 Physcomitrium patens HOM05D013579 ORTHO05D003690 3.1e-74 283.1 380 49.2
Pp3c14_19700 Physcomitrium patens HOM05D013579 ORTHO05D015305 3.7e-67 259.6 410 49.3
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 6.5e-56 222.2 415 43.4
Pp3c16_12300 Physcomitrium patens HOM05D013579 ORTHO05D001508 1.1e-52 211.5 414 42.8
Pp3c17_15140 Physcomitrium patens HOM05D013579 ORTHO05D015305 1.7e-51 207.6 405 44.2
Pp3c6_24870 Physcomitrium patens HOM05D013579 ORTHO05D015305 6.3e-51 205.7 398 44.0
Pp3c5_5250 Physcomitrium patens HOM05D013579 ORTHO05D015305 9.1e-50 201.8 406 40.9
Mapoly0029s0076 Marchantia polymorpha HOM05D013579 ORTHO05D015305 4.7e-22 109.8 415 30.6
SMO146G0238 Selaginella moellendorffii HOM05D003316 ORTHO05D003690 4.3e-15 86.7 346 27.7
Pp3c14_19730 Physcomitrium patens HOM05D018002 ORTHO05D015305 4.9e-11 73.2 307 28.0
Glyma.15G259100 Glycine max HOM05D003316 ORTHO05D003690 6.4e-11 72.8 339 28.3
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 1.1e-10 72.0 316 25.9
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 1.1e-10 72.0 322 28.3
Duzib213G0545 Durio zibethinus HOM05D003316 ORTHO05D003690 1.4e-10 71.6 323 26.3
VMungo1080G0561 Vigna mungo HOM05D003316 ORTHO05D003690 1.4e-10 71.6 335 27.5
Gohir.A01G096900 Gossypium hirsutum HOM05D003316 ORTHO05D003690 1.9e-10 71.2 310 25.5
Gohir.D01G081200 Gossypium hirsutum HOM05D003316 ORTHO05D003690 1.9e-10 71.2 310 25.5
Gohir.A13G122600 Gossypium hirsutum HOM05D003316 ORTHO05D003690 5.4e-10 69.7 324 27.2
FAN21G3518 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.2e-09 68.6 334 25.7
Aa31LG7G1040 Aethionema arabicum HOM05D003316 ORTHO05D003690 1.6e-09 68.2 316 27.8
FAN16G3516 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.6e-09 68.2 331 27.2
FvH4_3g15360 Fragaria vesca HOM05D003316 ORTHO05D003690 2.0e-09 67.8 327 27.5
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 2.0e-09 67.8 322 26.1
MSTRG.16103 Avicennia marina HOM05D003316 ORTHO05D003690 2.7e-09 67.4 173 32.4
FAN11G0988 Fragaria x ananassa HOM05D003316 ORTHO05D003690 2.7e-09 67.4 327 27.5
Gohir.D13G126700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 4.6e-09 66.6 326 26.1
Mapoly0029s0070 Marchantia polymorpha HOM05D018002 ORTHO05D015305 4.6e-09 66.6 309 24.9
DCAR_013730 Daucus carota HOM05D003316 ORTHO05D003690 6.0e-09 66.2 307 26.4
TPR.G33853 Trifolium pratense HOM05D003316 ORTHO05D003690 6.0e-09 66.2 360 26.1
Gorai.013G141800 Gossypium raimondii HOM05D003316 ORTHO05D003690 7.8e-09 65.9 325 26.5
Manes.14G011100 Manihot esculenta HOM05D003316 ORTHO05D003690 7.8e-09 65.9 304 27.3
FAN25G0335 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.0e-08 65.5 327 28.4
Thecc.07G169200 Theobroma cacao HOM05D003316 ORTHO05D003690 1.0e-08 65.5 329 27.4
EL10Ac8g18492 Beta vulgaris HOM05D003316 ORTHO05D003690 1.7e-08 64.7 279 28.3
Migut.H01676 Erythranthe guttata HOM05D003316 ORTHO05D003690 2.3e-08 64.3 153 30.7
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.3e-08 64.3 271 25.1
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 6.6e-08 62.8 333 26.4
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 6.6e-08 62.8 311 26.0
Medtr2g066700 Medicago truncatula HOM05D003316 ORTHO05D003690 6.6e-08 62.8 328 25.9
Pp3c2_10130 Physcomitrium patens HOM05D018002 ORTHO05D015305 6.6e-08 62.8 330 27.6
DCAR_016833 Daucus carota HOM05D003316 ORTHO05D003690 8.6e-08 62.4 319 25.4
QL04p080175 Quercus lobata HOM05D003316 ORTHO05D003690 8.6e-08 62.4 325 25.2
TWI38G1355 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 8.6e-08 62.4 306 26.8
Gorai.002G106100 Gossypium raimondii HOM05D003316 ORTHO05D003690 1.1e-07 62.0 310 26.1
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 1.1e-07 62.0 281 28.1
Rhsim06G0241400 Rhododendron simsii HOM05D003316 ORTHO05D003690 1.5e-07 61.6 269 27.5
AagrBONN_evm.TU.Sc2ySwM_228.4078 Anthoceros agrestis HOM05D013579 ORTHO05D015305 1.9e-07 61.2 105 37.1
HanXRQChr11g0335691 Helianthus annuus HOM05D003316 ORTHO05D003690 1.9e-07 61.2 310 27.1
Pp3c17_15100 Physcomitrium patens HOM05D018002 ORTHO05D015305 1.9e-07 61.2 309 25.9
Sc09g0007620 Simmondsia chinensis HOM05D003316 ORTHO05D003690 1.9e-07 61.2 153 32.0
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 2.5e-07 60.8 274 27.4
Duzib187G1768 Durio zibethinus HOM05D003316 ORTHO05D003690 2.5e-07 60.8 324 26.2
Lalb_Chr25g0284791 Lupinus albus HOM05D003316 ORTHO05D003690 2.5e-07 60.8 269 25.3
Sed0001262 Sechium edule HOM05D003316 ORTHO05D003690 2.5e-07 60.8 270 25.6
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 3.3e-07 60.5 154 29.2
SEGI_23541 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 3.3e-07 60.5 96 38.5
Lj1A910T5 Lonicera japonica HOM05D003316 ORTHO05D003690 4.3e-07 60.1 295 27.8
Lalb_Chr01g0015851 Lupinus albus HOM05D003316 ORTHO05D003690 4.3e-07 60.1 148 31.1
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 4.3e-07 60.1 306 24.2
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 5.6e-07 59.7 277 25.6
ECA236G2699 Erigeron canadensis HOM05D003316 ORTHO05D003690 5.6e-07 59.7 310 27.4
Lalb_Chr01g0007091 Lupinus albus HOM05D003316 ORTHO05D003690 7.3e-07 59.3 323 25.1
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 7.3e-07 59.3 304 27.3
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 9.5e-07 58.9 327 25.4
Eucgr.F01471 Eucalyptus grandis HOM05D003316 ORTHO05D003690 1.2e-06 58.5 276 25.7
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 1.6e-06 58.2 154 28.6
CARHR072810 Cardamine hirsuta HOM05D003316 ORTHO05D003690 2.1e-06 57.8 330 24.8
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.1e-06 57.8 281 26.7
Zm00001eb146970 Zea mays HOM05D001667 ORTHO05D001508 2.1e-06 57.8 66 43.9
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 2.8e-06 57.4 307 25.7
Lsat_1_v5_gn_7_110360 Lactuca sativa HOM05D003316 ORTHO05D003690 2.8e-06 57.4 327 26.0
QL04p080015 Quercus lobata HOM05D003316 ORTHO05D003690 2.8e-06 57.4 155 27.7
RcHm_v2.0_Chr5g0025801 Rosa chinensis HOM05D003316 ORTHO05D003690 2.8e-06 57.4 336 27.7
Zm00001eb288880 Zea mays HOM05D001667 ORTHO05D001508 2.8e-06 57.4 47 48.9
Lalb_Chr20g0108611 Lupinus albus HOM05D003316 ORTHO05D003690 3.6e-06 57.0 136 30.1
MD03G1151000 Malus domestica HOM05D001667 ORTHO05D001508 3.6e-06 57.0 107 35.5
vmacro11707 Vaccinium macrocarpon HOM05D003316 ORTHO05D003690 4.7e-06 56.6 277 24.5
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 6.2e-06 56.2 134 33.6
Gohir.D01G126900 Gossypium hirsutum HOM05D001667 ORTHO05D001508 6.2e-06 56.2 96 34.4
Lalb_Chr03g0031631 Lupinus albus HOM05D003316 ORTHO05D003690 6.2e-06 56.2 150 31.3
Psat6g082040 Pisum sativum HOM05D001667 ORTHO05D001508 6.2e-06 56.2 92 35.9
Cfa022970 Carpinus fangiana HOM05D003316 ORTHO05D003690 8.1e-06 55.8 154 31.8
MELO3C019643.2 Cucumis melo HOM05D003316 ORTHO05D003690 8.1e-06 55.8 142 35.9
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 8.1e-06 55.8 81 37.0
Potri.007G067300 Populus trichocarpa HOM05D003316 ORTHO05D003690 8.1e-06 55.8 277 26.4


User provided reference genes

Program Settings