Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.3e-254 882.5 428 100.0
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 9.1e-46 188.7 247 39.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.6e-34 151.4 244 37.3
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 3.6e-34 150.2 256 35.2
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 6.1e-34 149.4 254 34.6
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 8.0e-34 149.1 309 33.7
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.0e-33 148.7 298 34.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.0e-33 148.7 282 34.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.8e-33 147.9 298 34.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.8e-33 147.9 298 34.2
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.3e-33 147.5 259 33.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.3e-33 147.5 256 34.0
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 3.0e-33 147.1 370 30.0
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.0e-33 147.1 282 33.7
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.0e-33 147.1 256 35.9
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 4.0e-33 146.7 307 32.9
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.2e-33 146.4 282 33.7
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 6.8e-33 146.0 256 35.2
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 8.8e-33 145.6 266 34.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.2e-32 145.2 266 34.6
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.2e-32 145.2 268 35.8
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-32 145.2 315 33.3
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.2e-32 145.2 297 34.0
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.0e-32 144.4 256 35.2
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.0e-32 144.4 315 34.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.0e-32 144.4 256 36.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.6e-32 144.1 256 36.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.6e-32 144.1 256 33.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.6e-32 144.1 273 35.9
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.6e-32 144.1 292 32.2
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.4e-32 143.7 290 32.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.4e-32 143.7 307 33.9
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 4.4e-32 143.3 266 33.8
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 4.4e-32 143.3 256 34.8
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 5.7e-32 142.9 266 34.2
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 7.5e-32 142.5 259 36.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 7.5e-32 142.5 309 32.7
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 7.5e-32 142.5 260 35.0
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 7.5e-32 142.5 256 34.4
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 9.8e-32 142.1 259 35.5
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.8e-32 142.1 295 33.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.8e-32 142.1 295 33.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 9.8e-32 142.1 256 34.4
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 9.8e-32 142.1 297 30.6
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.3e-31 141.7 298 33.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.7e-31 141.4 258 33.7
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.7e-31 141.4 258 33.7
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.7e-31 141.4 260 35.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.7e-31 141.4 268 35.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.7e-31 141.4 255 34.5
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.7e-31 141.4 284 32.7
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.2e-31 141.0 307 32.2
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.2e-31 141.0 315 32.7
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.2e-31 141.0 241 36.9
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.8e-31 140.6 241 37.3
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.8e-31 140.6 256 34.8
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.8e-31 140.6 284 33.1
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 3.7e-31 140.2 312 30.4
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.8e-31 139.8 334 30.8
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.8e-31 139.8 295 32.9
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.8e-31 139.8 293 32.8
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.8e-31 139.8 256 34.4
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 4.8e-31 139.8 285 32.6
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 6.3e-31 139.4 315 32.4
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 8.3e-31 139.0 241 35.3
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.1e-30 138.7 256 33.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.1e-30 138.7 295 32.5
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.1e-30 138.7 256 34.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.4e-30 138.3 323 30.7
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.4e-30 137.5 282 33.0
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.4e-30 137.5 277 32.9
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.4e-30 137.5 271 33.9
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.4e-30 137.5 272 33.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.1e-30 137.1 268 34.0
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 3.1e-30 137.1 276 33.7
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 4.1e-30 136.7 256 35.2
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 5.4e-30 136.3 254 33.1
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 5.4e-30 136.3 264 34.8
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.0e-30 136.0 256 34.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 9.1e-30 135.6 259 34.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 9.1e-30 135.6 318 31.1
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 9.1e-30 135.6 259 31.7
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.2e-29 135.2 256 34.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.2e-29 135.2 256 32.8
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.6e-29 134.8 241 35.3
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.0e-29 134.4 257 33.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.0e-29 134.4 260 33.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 3.5e-29 133.7 312 31.7
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 4.5e-29 133.3 274 33.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.7e-28 131.3 295 32.2
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 6.5e-28 129.4 280 32.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.1e-27 128.6 275 31.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.1e-27 128.6 275 32.7
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.9e-27 127.9 256 30.9
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 3.2e-27 127.1 248 33.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.2e-26 125.2 206 35.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.1e-26 124.4 302 29.8
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 4.7e-26 123.2 280 30.4
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 4.0e-25 120.2 227 33.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 5.2e-25 119.8 388 29.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 5.2e-25 119.8 327 29.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.9e-20 104.0 167 37.1
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.8e-20 103.6 263 28.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 5.2e-17 93.2 140 37.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.2e-17 93.2 150 32.7
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.0e-16 91.3 277 27.4
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.4e-16 90.1 159 32.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.2e-14 84.0 173 32.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.2e-14 82.4 129 33.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.6e-13 80.1 135 31.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 7.8e-13 79.3 135 31.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 5.0e-12 76.6 267 26.6
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.0e-09 68.9 99 42.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.2e-06 55.8 114 34.2


User provided reference genes

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