Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 0.0e+00 1369.4 685 100.0
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.3e-296 1022.7 685 76.1
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.1e-117 428.3 609 44.5
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 1.7e-115 421.0 617 44.1
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-114 416.8 608 44.2
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-114 416.8 641 45.1
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-114 416.8 641 45.1
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.4e-112 411.4 637 42.1
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.6e-87 327.4 609 36.1
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 1.9e-85 321.2 600 35.8
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 6.7e-83 312.8 607 36.2
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 1.5e-82 311.6 619 36.7
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 1.9e-82 311.2 614 35.8
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 7.4e-82 309.3 610 34.6
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.0e-79 301.2 621 33.7
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 4.5e-79 300.1 588 35.7
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 2.2e-78 297.7 583 35.7
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 2.2e-78 297.7 608 35.7
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 5.0e-78 296.6 586 36.5
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 1.1e-77 295.4 631 34.5
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 2.5e-77 294.3 608 35.2
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 3.5e-76 290.4 759 32.0
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 3.5e-76 290.4 583 33.6
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.5e-76 290.4 620 34.4
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 4.6e-76 290.0 584 34.1
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 6.1e-76 289.7 613 33.8
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 6.1e-76 289.7 609 33.2
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 1.0e-75 288.9 599 33.2
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 1.3e-75 288.5 585 34.9
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 1.8e-75 288.1 599 33.2
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 2.3e-75 287.7 589 34.8
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 3.9e-75 287.0 590 34.4
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 3.9e-75 287.0 586 35.7
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 5.1e-75 286.6 590 35.3
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 6.7e-75 286.2 633 32.2
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 1.1e-74 285.4 612 33.8
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 1.5e-74 285.0 630 32.7
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 2.5e-74 284.3 604 33.6
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 3.3e-74 283.9 583 34.3
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 3.3e-74 283.9 610 32.1
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 9.7e-74 282.3 591 34.0
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 9.7e-74 282.3 586 33.8
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.3e-73 282.0 591 33.5
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.3e-73 282.0 583 34.8
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 2.8e-73 280.8 608 33.9
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 2.8e-73 280.8 622 32.8
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 3.7e-73 280.4 646 32.4
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 3.7e-73 280.4 616 32.0
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 3.7e-73 280.4 618 33.8
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 6.3e-73 279.6 644 33.1
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 6.3e-73 279.6 626 34.2
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 8.2e-73 279.3 612 34.0
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 8.2e-73 279.3 583 34.5
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 1.1e-72 278.9 637 32.7
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 1.1e-72 278.9 588 33.5
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 1.1e-72 278.9 600 34.3
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 1.4e-72 278.5 592 34.5
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 6.9e-72 276.2 620 33.4
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 9.0e-72 275.8 597 33.5
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 1.2e-71 275.4 638 31.3
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 1.5e-71 275.0 588 33.7
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 2.0e-71 274.6 639 31.6
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 3.4e-71 273.9 591 33.3
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 3.4e-71 273.9 588 33.3
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 4.5e-71 273.5 589 33.3
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 5.9e-71 273.1 637 31.4
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 7.7e-71 272.7 647 32.1
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 1.0e-70 272.3 597 33.7
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 1.3e-70 271.9 583 32.4
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 1.3e-70 271.9 638 33.1
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 1.3e-70 271.9 615 33.2
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.3e-70 271.9 580 34.1
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 2.9e-70 270.8 588 31.6
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 6.5e-70 269.6 644 31.2
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 8.5e-70 269.2 626 33.1
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 1.1e-69 268.9 624 32.7
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 1.1e-69 268.9 612 32.8
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 1.4e-69 268.5 622 33.1
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 1.4e-69 268.5 617 33.2
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 5.5e-69 266.5 587 33.4
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 5.5e-69 266.5 612 33.5
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 9.4e-69 265.8 584 33.0
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 9.4e-69 265.8 599 33.2
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 3.6e-68 263.8 637 32.0
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 3.6e-68 263.8 596 33.6
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 3.6e-68 263.8 589 33.1
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 1.4e-67 261.9 600 32.3
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 2.3e-67 261.2 593 31.4
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 2.3e-67 261.2 592 32.6
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 3.0e-67 260.8 647 31.1
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 3.0e-67 260.8 590 32.4
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 5.1e-67 260.0 604 32.9
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 2.5e-66 257.7 633 31.0
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 2.5e-66 257.7 620 32.3
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 1.7e-65 255.0 622 32.0
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 2.8e-65 254.2 605 31.7
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 8.2e-65 252.7 612 32.5
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 1.4e-64 251.9 605 32.6
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 2.0e-63 248.1 592 30.7
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 2.6e-63 247.7 605 30.9
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 3.4e-63 247.3 565 32.4
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 1.3e-62 245.4 645 30.4
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 6.5e-62 243.0 557 31.2
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 8.5e-62 242.7 651 30.6
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 3.2e-61 240.7 583 31.0
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 4.2e-61 240.4 637 29.8
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 7.2e-61 239.6 589 31.2
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 1.6e-60 238.4 565 32.6
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 1.6e-60 238.4 583 31.0
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 1.6e-60 238.4 595 31.4
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 3.6e-60 237.3 604 30.3
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 6.1e-60 236.5 576 30.4
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.0e-59 235.7 621 31.1
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 3.0e-59 234.2 589 30.6
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 1.5e-58 231.9 484 36.8
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 2.0e-58 231.5 596 32.6
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 5.7e-58 229.9 554 34.1
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 1.3e-57 228.8 592 32.1
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.3e-57 228.8 613 30.7
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.7e-57 228.4 583 30.9
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 2.2e-57 228.0 542 33.9
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 2.4e-56 224.6 233 45.5
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 3.1e-56 224.2 705 27.9
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.1e-56 223.8 617 30.1
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 1.2e-55 222.2 542 31.2
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 5.0e-54 216.9 590 30.5
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 6.5e-54 216.5 618 29.9
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 4.2e-53 213.8 587 28.3
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 1.3e-49 202.2 192 49.0
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 4.5e-47 193.7 187 46.5
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 4.0e-43 180.6 188 46.3
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 5.2e-43 180.3 159 51.6
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 5.7e-42 176.8 585 27.4
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 5.7e-42 176.8 636 27.2
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 1.1e-40 172.6 517 30.6
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 5.9e-39 166.8 647 26.4
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 7.2e-37 159.8 541 30.9
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 1.3e-30 139.0 197 38.6
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 2.2e-25 121.7 185 38.4
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 4.3e-21 107.5 178 36.5
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 4.7e-20 104.0 98 44.9
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 9.8e-18 96.3 130 47.7
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 2.9e-17 94.7 155 41.3
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 6.4e-17 93.6 110 45.5
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 2.7e-15 88.2 90 45.6
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 1.0e-14 86.3 105 52.4
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 1.1e-11 76.3 105 44.8
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 2.3e-11 75.1 113 42.5
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 6.8e-11 73.6 114 43.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.5e-10 72.4 114 42.1
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 2.0e-10 72.0 59 47.5
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 5.8e-10 70.5 106 34.9


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