Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.5e-267 924.9 467 100.0
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-173 613.2 469 68.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.7e-134 481.1 469 54.2
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-129 467.6 467 54.0
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.2e-129 464.9 453 55.2
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.6e-128 462.2 451 56.1
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.8e-127 460.3 347 66.6
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.8e-125 453.0 452 53.5
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.1e-110 404.4 325 59.7
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-110 404.1 428 50.0
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.7e-83 313.5 322 48.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.9e-83 312.4 325 48.9
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 7.8e-83 312.0 317 48.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.7e-82 310.8 316 49.1
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.7e-82 310.8 316 49.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.9e-82 310.1 309 49.5
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.9e-82 310.1 308 50.0
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 3.3e-81 306.6 326 47.5
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.3e-81 306.6 308 49.7
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.2e-80 304.7 317 48.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.1e-80 303.9 329 47.4
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.8e-80 303.5 313 48.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 6.2e-80 302.4 331 46.8
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.0e-79 301.6 309 47.9
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.8e-79 300.8 310 48.1
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.3e-79 300.4 310 50.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.1e-79 300.1 318 46.9
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 5.2e-79 299.3 308 48.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 5.2e-79 299.3 306 48.4
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.8e-79 298.9 306 49.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 6.8e-79 298.9 325 46.8
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 8.9e-79 298.5 313 47.0
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.5e-78 297.7 309 48.5
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.5e-78 297.7 312 47.4
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.0e-78 297.4 306 48.7
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.6e-78 297.0 308 48.7
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 3.4e-78 296.6 313 46.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 4.4e-78 296.2 306 48.4
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.5e-78 295.4 325 46.5
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 9.8e-78 295.0 306 48.4
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.3e-77 294.7 306 48.4
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.3e-77 294.7 306 49.0
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.7e-77 294.3 307 49.2
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.7e-77 294.3 307 49.2
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 2.2e-77 293.9 307 49.2
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.2e-77 293.9 317 46.7
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.7e-77 293.1 334 45.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.7e-77 293.1 312 48.7
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 4.9e-77 292.7 308 47.4
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 6.4e-77 292.4 311 48.2
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 8.3e-77 292.0 313 47.6
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 8.3e-77 292.0 308 46.4
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.1e-76 291.6 306 47.4
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.4e-76 291.2 317 46.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.4e-76 290.4 312 47.1
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 2.4e-76 290.4 313 47.0
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 4.1e-76 289.7 308 47.1
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.4e-76 289.3 307 48.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 9.2e-76 288.5 309 48.2
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 9.2e-76 288.5 307 47.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.2e-75 288.1 314 46.2
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-75 287.7 314 46.5
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 4.6e-75 286.2 313 46.3
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 6.0e-75 285.8 309 45.6
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.0e-74 285.0 213 67.6
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.7e-74 284.3 313 46.0
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.7e-74 284.3 307 47.6
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.3e-74 283.9 305 46.9
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.9e-74 283.1 286 50.3
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 6.6e-74 282.3 319 43.6
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 8.6e-74 282.0 352 43.5
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.5e-73 280.4 317 45.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 7.3e-73 278.9 330 43.6
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 7.3e-73 278.9 317 45.4
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 9.5e-73 278.5 309 44.7
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.2e-72 278.1 327 43.7
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.2e-72 278.1 292 46.9
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.6e-72 277.7 317 45.4
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.1e-72 277.3 297 46.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.8e-72 276.9 309 46.0
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.6e-72 276.6 330 43.3
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.1e-71 275.0 307 46.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.3e-71 273.9 317 44.5
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 2.3e-71 273.9 306 44.8
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 4.0e-71 273.1 273 50.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 6.8e-71 272.3 306 44.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.6e-70 270.4 317 43.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.9e-69 266.9 269 49.1
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.9e-69 266.9 309 45.0
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 4.9e-69 266.2 329 42.6
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.9e-68 264.2 338 42.3
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.4e-68 263.8 271 49.8
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 6.0e-67 259.2 334 41.3
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 3.0e-66 256.9 309 43.7
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.9e-65 254.2 313 41.5
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 9.5e-65 251.9 290 44.5
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 9.9e-62 241.9 328 41.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.9e-57 227.6 234 50.0
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 4.3e-57 226.5 258 44.6
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 5.2e-55 219.5 251 45.4
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 8.9e-55 218.8 308 38.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 4.9e-53 213.0 306 40.2
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.0e-50 205.3 235 47.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 4.8e-48 196.4 315 34.6
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 2.4e-47 194.1 223 46.2
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 3.1e-47 193.7 314 35.7
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.8e-34 151.4 308 30.8
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 4.8e-32 143.3 313 29.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.2e-21 107.8 103 49.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 2.4e-15 87.8 127 40.9
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-09 68.9 122 34.4


User provided reference genes

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