Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 2.2e-216 755.4 381 100.0
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 2.9e-112 409.5 375 58.9
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 4.2e-103 379.0 356 57.3
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.6e-102 377.1 361 56.2
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.4e-101 374.0 349 56.7
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.4e-101 374.0 349 56.7
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 1.8e-101 373.6 353 56.9
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 1.8e-101 373.6 347 57.1
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 2.3e-101 373.2 378 53.4
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 3.9e-101 372.5 377 53.6
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 3.9e-101 372.5 349 56.4
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 5.2e-101 372.1 347 57.1
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 6.7e-101 371.7 350 56.3
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 1.5e-100 370.5 347 55.6
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 7.4e-100 368.2 348 56.3
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 1.3e-99 367.5 349 55.9
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 1.3e-99 367.5 349 55.9
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 1.3e-99 367.5 350 54.9
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.7e-99 367.1 356 55.1
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 1.7e-99 367.1 352 56.0
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 2.2e-99 366.7 347 55.6
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 6.3e-99 365.2 379 52.8
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 8.2e-99 364.8 369 52.3
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 1.1e-98 364.4 350 54.3
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 1.1e-98 364.4 351 56.1
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 1.4e-98 364.0 380 52.9
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 1.4e-98 364.0 379 52.8
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 2.4e-98 363.2 380 52.4
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 3.1e-98 362.8 353 54.4
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 3.1e-98 362.8 347 55.6
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 3.1e-98 362.8 379 53.0
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 4.1e-98 362.5 388 51.5
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 5.3e-98 362.1 354 54.5
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.2e-97 360.9 368 52.7
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 1.6e-97 360.5 351 54.4
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 2.0e-97 360.1 347 55.9
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 2.6e-97 359.8 348 55.7
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 5.9e-97 358.6 352 54.5
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 7.7e-97 358.2 383 53.0
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 7.7e-97 358.2 348 53.4
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 1.0e-96 357.8 352 53.7
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.0e-96 357.8 368 52.2
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 2.2e-96 356.7 368 52.4
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 2.2e-96 356.7 349 54.2
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 3.8e-96 355.9 377 52.3
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 5.0e-96 355.5 383 51.7
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 5.0e-96 355.5 349 54.2
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 5.0e-96 355.5 375 52.5
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 8.5e-96 354.8 376 52.7
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 8.5e-96 354.8 347 54.2
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 8.5e-96 354.8 377 52.0
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 8.5e-96 354.8 370 53.0
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 1.1e-95 354.4 378 51.1
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.1e-95 354.4 347 55.0
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 1.1e-95 354.4 349 53.9
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 1.5e-95 354.0 367 52.6
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 1.5e-95 354.0 375 50.7
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.5e-95 354.0 347 54.2
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 1.9e-95 353.6 374 52.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.5e-95 353.2 375 53.1
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 2.5e-95 353.2 362 53.3
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 2.5e-95 353.2 380 51.6
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 2.5e-95 353.2 351 54.1
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 2.5e-95 353.2 350 54.6
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 3.2e-95 352.8 375 52.8
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 7.2e-95 351.7 375 52.3
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 7.2e-95 351.7 375 52.3
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 7.2e-95 351.7 379 51.5
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 7.2e-95 351.7 373 51.7
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 9.4e-95 351.3 357 52.7
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 1.2e-94 350.9 379 52.2
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 1.2e-94 350.9 347 54.2
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 1.2e-94 350.9 348 54.0
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.6e-94 350.5 347 53.6
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 1.6e-94 350.5 377 50.7
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 1.6e-94 350.5 372 52.7
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.6e-94 350.5 357 52.1
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 2.7e-94 349.7 377 51.5
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 2.7e-94 349.7 350 53.1
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 2.7e-94 349.7 360 53.1
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 3.6e-94 349.4 349 53.9
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 1.0e-93 347.8 375 51.2
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 1.4e-93 347.4 378 50.8
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 5.2e-93 345.5 376 52.9
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 8.8e-93 344.7 382 50.0
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 8.8e-93 344.7 348 53.7
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 1.5e-92 344.0 348 53.4
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 5.7e-92 342.0 354 50.0
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 1.3e-91 340.9 393 49.1
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 3.5e-89 332.8 366 49.7
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 1.2e-81 307.8 347 49.6
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 3.8e-80 302.8 308 52.9
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 4.2e-79 299.3 372 46.5
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.5e-76 290.8 349 46.4
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 1.0e-69 268.1 377 44.0
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 8.9e-69 265.0 282 52.5
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 1.7e-67 260.8 280 50.0
ATR0767G136 Amborella trichopoda HOM05D002866 ORTHO05D008929 7.3e-63 245.4 296 49.0
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 7.5e-60 235.3 299 45.2
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 1.7e-59 234.2 331 42.6
Haze_26420 Corylus avellana HOM05D002866 ORTHO05D008929 3.7e-59 233.0 327 42.5
ATR0057G117 Amborella trichopoda HOM05D002866 ORTHO05D008929 1.2e-57 228.0 273 49.1
Aqoxy6G00570 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.2e-49 201.4 224 50.4
ClCG07G016910 Citrullus lanatus HOM05D002866 ORTHO05D008929 1.2e-49 201.4 221 49.3
CDE11G0041 Ceratophyllum demersum HOM05D002866 ORTHO05D008929 1.7e-35 154.5 204 43.6
SEGI_24637 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 2.9e-35 153.7 169 49.1
SEGI_35611 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 2.9e-35 153.7 169 49.1
MELO3C017653.2 Cucumis melo HOM05D002866 ORTHO05D008929 2.1e-25 120.9 93 55.9
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.0e-24 118.6 79 69.6
Glyma.14G148200 Glycine max HOM05D002866 ORTHO05D008929 3.1e-21 107.1 88 54.5
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.5e-20 104.8 65 72.3
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 2.6e-20 104.0 72 66.7
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 2.5e-18 97.4 66 68.2
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 6.0e-17 92.8 53 79.2
RcHm_v2.0_Chr1g0373731 Rosa chinensis HOM05D002866 ORTHO05D015989 1.9e-15 87.8 68 64.7
MD08G1232700 Malus domestica HOM05D002866 ORTHO05D008929 3.5e-09 67.0 84 45.2
Hund11849 Selenicereus undatus HOM05D025212 ORTHO05D015989 2.2e-06 57.8 46 58.7


User provided reference genes

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